RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 DGKZQ13574 1117 aa4.79□□□□□ -1.64
CBX3P4-201ENST00000538909 LARGE2Q8N3Y3 721 aa4.79□□□□□ -1.64
CBX3P4-201ENST00000538909 ASIC4Q96FT7 647 aa4.79□□□□□ -1.64
CBX3P4-201ENST00000538909 MYRFLQ96LU7 910 aa4.79□□□□□ -1.64
CBX3P4-201ENST00000538909 CARD10Q9BWT7 1032 aa4.79□□□□□ -1.64
CBX3P4-201ENST00000538909 RBSNQ9H1K0 784 aa4.79□□□□□ -1.64
CBX3P4-201ENST00000538909 PPME1Q9Y570 386 aa4.79□□□□□ -1.64
CBX3P4-201ENST00000538909 BMP3P12645 472 aa4.78□□□□□ -1.64
CBX3P4-201ENST00000538909 UVSSAQ2YD98 709 aa4.78□□□□□ -1.64
CBX3P4-201ENST00000538909 BEND4Q6ZU67 534 aa4.78□□□□□ -1.64
CBX3P4-201ENST00000538909 FAM20CQ8IXL6 584 aa4.78□□□□□ -1.64
CBX3P4-201ENST00000538909 MFSD14AQ96MC6 490 aa4.78□□□□□ -1.64
CBX3P4-201ENST00000538909 LACRTQ9GZZ8 138 aa4.78□□□□□ -1.64
CBX3P4-201ENST00000538909 MKRN1Q9UHC7 482 aaKnown RBP4.78□□□□□ -1.64
CBX3P4-201ENST00000538909 DDX3YO15523 660 aaKnown RBP4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 SART1O43290 800 aaKnown RBP4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 MMP20O60882 483 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 XYLBO75191 536 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 MICAL2O94851 1124 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 KIAA1211Q6ZU35 1233 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 CLEC10AQ8IUN9 316 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 PLEKHM2Q8IWE5 1019 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 SIX5Q8N196 739 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 UBASH3BQ8TF42 649 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 COL26A1Q96A83 441 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 HINFPQ9BQA5 517 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 FAM83CQ9BQN1 747 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 MUC3BQ9H195 1237 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 PIM2Q9P1W9 311 aa4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 RTCBQ9Y3I0 505 aaKnown RBP4.77□□□□□ -1.65
CBX3P4-201ENST00000538909 ZNF124Q15973 351 aa4.76□□□□□ -1.65
CBX3P4-201ENST00000538909 DUOXA2Q1HG44 320 aa4.76□□□□□ -1.65
CBX3P4-201ENST00000538909 ZNF648Q5T619 568 aaPredicted RBP4.76□□□□□ -1.65
CBX3P4-201ENST00000538909 TP53INP2Q8IXH6 220 aa4.76□□□□□ -1.65
CBX3P4-201ENST00000538909 RGL4Q8IZJ4 473 aa4.76□□□□□ -1.65
CBX3P4-201ENST00000538909 CMTR1Q8N1G2 835 aaKnown RBP4.76□□□□□ -1.65
CBX3P4-201ENST00000538909 FBXL6Q8N531 539 aa4.76□□□□□ -1.65
CBX3P4-201ENST00000538909 DKK1O94907 266 aa4.75□□□□□ -1.65
CBX3P4-201ENST00000538909 CBLL1Q75N03 491 aa4.75□□□□□ -1.65
CBX3P4-201ENST00000538909 ATG3Q9NT62 314 aa4.75□□□□□ -1.65
CBX3P4-201ENST00000538909 CCDC39Q9UFE4 941 aa4.75□□□□□ -1.65
CBX3P4-201ENST00000538909 LEMD3Q9Y2U8 911 aa4.75□□□□□ -1.65
CBX3P4-201ENST00000538909 OPLAHO14841 1288 aa4.74□□□□□ -1.65
CBX3P4-201ENST00000538909 PREPP48147 710 aa4.74□□□□□ -1.65
CBX3P4-201ENST00000538909 SEC13P55735 322 aa4.74□□□□□ -1.65
CBX3P4-201ENST00000538909 ATP11AP98196 1134 aa4.74□□□□□ -1.65
CBX3P4-201ENST00000538909 FBLN7Q53RD9 439 aa4.74□□□□□ -1.65
CBX3P4-201ENST00000538909 FOXD4L4Q8WXT5 416 aaPredicted RBP4.74□□□□□ -1.65
CBX3P4-201ENST00000538909 C11orf16Q9NQ32 467 aa4.74□□□□□ -1.65
CBX3P4-201ENST00000538909 COG6Q9Y2V7 657 aa4.74□□□□□ -1.65
CBX3P4-201ENST00000538909 FSCN2O14926 492 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 ADAM11O75078 769 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 ITGB5P18084 799 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 CDC27P30260 824 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 MCM6Q14566 821 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 COL19A1Q14993 1142 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 MSMPQ1L6U9 139 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 CEP135Q66GS9 1140 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 SPOCD1Q6ZMY3 1216 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 NFXL1Q6ZNB6 911 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 CACTIN-AS1Q8N1I8 211 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 UCN2Q96RP3 112 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 OSBPL1AQ9BXW6 950 aa4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 QTRT2Q9H974 415 aaKnown RBP4.73□□□□□ -1.65
CBX3P4-201ENST00000538909 POM121CA8CG34 1229 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 ATP9BO43861 1147 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 GAS2O43903 313 aaKnown RBP4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 EGFRP00533 1210 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 F13BP05160 661 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 JUNBP17275 347 aaPredicted RBP4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 RXRBP28702 533 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 SOX18P35713 384 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 C11orf91Q3C1V1 193 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 FAM117BQ6P1L5 589 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 ADAMTSL4Q6UY14 1074 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 VSIG10LQ86VR7 867 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 GIMAP7Q8NHV1 300 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 ADAMTS19Q8TE59 1207 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 FBXL18Q96ME1 805 aa4.72□□□□□ -1.65
CBX3P4-201ENST00000538909 TM4SF5O14894 197 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 HOXD8P13378 290 aaPredicted RBP4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 FOSL1P15407 271 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 IGFBP4P22692 258 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 MAP4P27816 1152 aaKnown RBP4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 SGO2Q562F6 1265 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 COL13A1Q5TAT6 717 aaPredicted RBP4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 ANKRD34AQ69YU3 496 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 FDX2Q6P4F2 183 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 TREML1Q86YW5 311 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 WWC1Q8IX03 1113 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 SHISA5Q8N114 240 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 FLCNQ8NFG4 579 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 CCER1Q8TC90 406 aaPredicted RBP4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 VTI1AQ96AJ9 217 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 KLHDC7BQ96G42 594 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 SH2B1Q9NRF2 756 aaPredicted RBP4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 KCNMB2Q9Y691 235 aa4.71□□□□□ -1.66
CBX3P4-201ENST00000538909 DBX1A6NMT0 343 aa4.7□□□□□ -1.66
CBX3P4-201ENST00000538909 SMNDC1O75940 238 aaKnown RBP eCLIP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms