RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ANKIB1Q9P2G1 1089 aa22.68■■□□□ 1.22
TNFRSF1A-209ENST00000536717 PCNTO95613 3336 aa22.68■■□□□ 1.22
TNFRSF1A-209ENST00000536717 RAD17O75943 681 aa22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 LMOD1P29536 600 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 FAM161AQ3B820 660 aa22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 PNMA8AQ86V59 439 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 EYA3Q99504 573 aa22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 DBNDD1Q9H9R9 158 aa22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 BSDC1Q9NW68 430 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 ZBED9Q6R2W3 1325 aa22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 UFL1O94874 794 aa22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 SLC4A10Q6U841 1118 aa22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 GGA1Q9UJY5 639 aa22.67■■□□□ 1.22
TNFRSF1A-209ENST00000536717 A0A1B0GUL6 1792 aa22.66■■□□□ 1.22
TNFRSF1A-209ENST00000536717 ITGA6P23229 1130 aa22.66■■□□□ 1.22
TNFRSF1A-209ENST00000536717 XDHP47989 1333 aa22.66■■□□□ 1.22
TNFRSF1A-209ENST00000536717 GRM8O00222 908 aa22.65■■□□□ 1.22
TNFRSF1A-209ENST00000536717 ALDH1L1O75891 902 aa22.65■■□□□ 1.22
TNFRSF1A-209ENST00000536717 FOXO4P98177 505 aa22.65■■□□□ 1.22
TNFRSF1A-209ENST00000536717 BCL2L13Q9BXK5 485 aa22.65■■□□□ 1.22
TNFRSF1A-209ENST00000536717 GPRC5DQ9NZD1 345 aa22.65■■□□□ 1.22
TNFRSF1A-209ENST00000536717 MINPP1Q9UNW1 487 aa22.65■■□□□ 1.22
TNFRSF1A-209ENST00000536717 ECE2O60344 883 aa22.64■■□□□ 1.21
TNFRSF1A-209ENST00000536717 GMPSP49915 693 aaPredicted RBP22.64■■□□□ 1.21
TNFRSF1A-209ENST00000536717 TNIP1Q15025 636 aa22.64■■□□□ 1.21
TNFRSF1A-209ENST00000536717 DOK7Q18PE1 504 aa22.64■■□□□ 1.21
TNFRSF1A-209ENST00000536717 YTHDC1Q96MU7 727 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1A-209ENST00000536717 ZC3H12CQ9C0D7 883 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1A-209ENST00000536717 SRCIN1Q9C0H9 1055 aa22.64■■□□□ 1.21
TNFRSF1A-209ENST00000536717 CLEC11AQ9Y240 323 aa22.64■■□□□ 1.21
TNFRSF1A-209ENST00000536717 ITGBL1O95965 494 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF1A-209ENST00000536717 ALDH1L2Q3SY69 923 aa22.63■■□□□ 1.21
TNFRSF1A-209ENST00000536717 PTPRCP08575 1304 aa22.63■■□□□ 1.21
TNFRSF1A-209ENST00000536717 PASKQ96RG2 1323 aa22.63■■□□□ 1.21
TNFRSF1A-209ENST00000536717 WTIPA6NIX2 430 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1A-209ENST00000536717 IGHMBP2P38935 993 aaKnown RBP22.62■■□□□ 1.21
TNFRSF1A-209ENST00000536717 EPHA10Q5JZY3 1008 aa22.62■■□□□ 1.21
TNFRSF1A-209ENST00000536717 KCNQ5Q9NR82 932 aa22.62■■□□□ 1.21
TNFRSF1A-209ENST00000536717 POLR2AP24928 1970 aaKnown RBP22.62■■□□□ 1.21
TNFRSF1A-209ENST00000536717 PSMD14O00487 310 aa22.62■■□□□ 1.21
TNFRSF1A-209ENST00000536717 ATP2B4P23634 1241 aa22.62■■□□□ 1.21
TNFRSF1A-209ENST00000536717 MAP1SQ66K74 1059 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1A-209ENST00000536717 C9orf78Q9NZ63 289 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1A-209ENST00000536717 USP50Q70EL3 339 aaPredicted RBP22.61■■□□□ 1.21
TNFRSF1A-209ENST00000536717 ADARB2Q9NS39 739 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1A-209ENST00000536717 ZNF646O15015 1829 aaPredicted RBP22.6■■□□□ 1.21
TNFRSF1A-209ENST00000536717 TRPM7Q96QT4 1865 aa22.6■■□□□ 1.21
TNFRSF1A-209ENST00000536717 CT47B1P0C2W7 299 aaPredicted RBP22.6■■□□□ 1.21
TNFRSF1A-209ENST00000536717 KLRG1Q96E93 195 aa22.6■■□□□ 1.21
TNFRSF1A-209ENST00000536717 ZBTB12Q9Y330 459 aaPredicted RBP22.6■■□□□ 1.21
TNFRSF1A-209ENST00000536717 SHTN1A0MZ66 631 aa22.59■■□□□ 1.21
TNFRSF1A-209ENST00000536717 ANKRD18BA2A2Z9 1011 aa22.59■■□□□ 1.21
TNFRSF1A-209ENST00000536717 NBPF7P0C2Y1 421 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF1A-209ENST00000536717 CCT4P50991 539 aaKnown RBP22.59■■□□□ 1.21
TNFRSF1A-209ENST00000536717 LMBR1LQ6UX01 489 aa22.59■■□□□ 1.21
TNFRSF1A-209ENST00000536717 CNTROBQ8N137 903 aa22.59■■□□□ 1.21
TNFRSF1A-209ENST00000536717 MPHOSPH8Q99549 860 aa22.59■■□□□ 1.21
TNFRSF1A-209ENST00000536717 SMC4Q9NTJ3 1288 aa22.59■■□□□ 1.21
TNFRSF1A-209ENST00000536717 MED23Q9ULK4 1368 aa22.58■■□□□ 1.21
TNFRSF1A-209ENST00000536717 UTYO14607 1347 aa22.58■■□□□ 1.21
TNFRSF1A-209ENST00000536717 KAZALD1Q96I82 304 aa22.58■■□□□ 1.21
TNFRSF1A-209ENST00000536717 CHMP3Q9Y3E7 222 aa22.58■■□□□ 1.21
TNFRSF1A-209ENST00000536717 IFIT5Q13325 482 aaKnown RBP22.57■■□□□ 1.2
TNFRSF1A-209ENST00000536717 DPF2Q92785 391 aa22.57■■□□□ 1.2
TNFRSF1A-209ENST00000536717 SUCLG2Q96I99 432 aa22.57■■□□□ 1.2
TNFRSF1A-209ENST00000536717 CNOT7Q9UIV1 285 aaKnown RBP22.57■■□□□ 1.2
TNFRSF1A-209ENST00000536717 CREBZFQ9NS37 354 aa22.57■■□□□ 1.2
TNFRSF1A-209ENST00000536717 G3V3G9 751 aa22.56■■□□□ 1.2
TNFRSF1A-209ENST00000536717 CHRNDQ07001 517 aa22.56■■□□□ 1.2
TNFRSF1A-209ENST00000536717 DCAF8Q5TAQ9 597 aa22.56■■□□□ 1.2
TNFRSF1A-209ENST00000536717 MICALL2Q8IY33 904 aa22.56■■□□□ 1.2
TNFRSF1A-209ENST00000536717 LEMD3Q9Y2U8 911 aa22.56■■□□□ 1.2
TNFRSF1A-209ENST00000536717 VIL1P09327 827 aaKnown RBP22.55■■□□□ 1.2
TNFRSF1A-209ENST00000536717 HIRAP54198 1017 aaPredicted RBP22.55■■□□□ 1.2
TNFRSF1A-209ENST00000536717 TRPM4Q8TD43 1214 aa22.55■■□□□ 1.2
TNFRSF1A-209ENST00000536717 ANKRD2Q9GZV1 360 aa22.55■■□□□ 1.2
TNFRSF1A-209ENST00000536717 RPS12P25398 132 aaKnown RBP22.54■■□□□ 1.2
TNFRSF1A-209ENST00000536717 BRPF1P55201 1214 aaPredicted RBP22.54■■□□□ 1.2
TNFRSF1A-209ENST00000536717 TXNRD3Q86VQ6 643 aa22.54■■□□□ 1.2
TNFRSF1A-209ENST00000536717 ZNF594Q96JF6 807 aaPredicted RBP22.54■■□□□ 1.2
TNFRSF1A-209ENST00000536717 ZNF804BA4D1E1 1349 aa22.53■■□□□ 1.2
TNFRSF1A-209ENST00000536717 CCDC57Q2TAC2 916 aa22.53■■□□□ 1.2
TNFRSF1A-209ENST00000536717 PODNQ7Z5L7 613 aa22.53■■□□□ 1.2
TNFRSF1A-209ENST00000536717 ZNF609O15014 1411 aa22.52■■□□□ 1.2
TNFRSF1A-209ENST00000536717 H7C1D1 291 aa22.52■■□□□ 1.2
TNFRSF1A-209ENST00000536717 KLRK1P26718 216 aa22.52■■□□□ 1.2
TNFRSF1A-209ENST00000536717 JMYQ8N9B5 988 aa22.52■■□□□ 1.2
TNFRSF1A-209ENST00000536717 USP44Q9H0E7 712 aa22.52■■□□□ 1.2
TNFRSF1A-209ENST00000536717 PGAP2Q9UHJ9 254 aa22.52■■□□□ 1.2
TNFRSF1A-209ENST00000536717 RARSP54136 660 aaKnown RBP22.52■■□□□ 1.19
TNFRSF1A-209ENST00000536717 FMR1Q06787 632 aaKnown RBP eCLIP22.52■■□□□ 1.19
TNFRSF1A-209ENST00000536717 RABL6Q3YEC7 729 aaPredicted RBP22.52■■□□□ 1.19
TNFRSF1A-209ENST00000536717 SAMD7Q7Z3H4 446 aa22.52■■□□□ 1.19
TNFRSF1A-209ENST00000536717 BICC1Q9H694 974 aaKnown RBP22.52■■□□□ 1.19
TNFRSF1A-209ENST00000536717 NOB1Q9ULX3 412 aaKnown RBP22.52■■□□□ 1.19
TNFRSF1A-209ENST00000536717 TMEM88BA6NKF7 163 aa22.51■■□□□ 1.19
TNFRSF1A-209ENST00000536717 SNAP23O00161 211 aa22.51■■□□□ 1.19
TNFRSF1A-209ENST00000536717 TAF5LO75529 589 aa22.51■■□□□ 1.19
TNFRSF1A-209ENST00000536717 EGFRP00533 1210 aa22.51■■□□□ 1.19
TNFRSF1A-209ENST00000536717 HELBQ8NG08 1087 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms