RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 PODXL2Q9NZ53 605 aa17.02■□□□□ 0.32
RPAIN-205ENST00000536255 ANKIB1Q9P2G1 1089 aa17.02■□□□□ 0.32
RPAIN-205ENST00000536255 POLLQ9UGP5 575 aa17.02■□□□□ 0.32
RPAIN-205ENST00000536255 HDAC5Q9UQL6 1122 aa17.02■□□□□ 0.32
RPAIN-205ENST00000536255 UTYO14607 1347 aa17.01■□□□□ 0.31
RPAIN-205ENST00000536255 C6orf229H3BNL8 230 aa17.01■□□□□ 0.31
RPAIN-205ENST00000536255 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
RPAIN-205ENST00000536255 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
RPAIN-205ENST00000536255 TBC1D16Q8TBP0 767 aa17.01■□□□□ 0.31
RPAIN-205ENST00000536255 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
RPAIN-205ENST00000536255 BSDC1Q9NW68 430 aaPredicted RBP17.01■□□□□ 0.31
RPAIN-205ENST00000536255 ZNRF3Q9ULT6 936 aa17.01■□□□□ 0.31
RPAIN-205ENST00000536255 IQCA1LA6NCM1 817 aa17■□□□□ 0.31
RPAIN-205ENST00000536255 IGHMBP2P38935 993 aaKnown RBP17■□□□□ 0.31
RPAIN-205ENST00000536255 EYA3Q99504 573 aa17■□□□□ 0.31
RPAIN-205ENST00000536255 USP44Q9H0E7 712 aa17■□□□□ 0.31
RPAIN-205ENST00000536255 XDHP47989 1333 aa16.99■□□□□ 0.31
RPAIN-205ENST00000536255 UFL1O94874 794 aa16.99■□□□□ 0.31
RPAIN-205ENST00000536255 NBPF7P0C2Y1 421 aaPredicted RBP16.99■□□□□ 0.31
RPAIN-205ENST00000536255 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
RPAIN-205ENST00000536255 LMBR1LQ6UX01 489 aa16.99■□□□□ 0.31
RPAIN-205ENST00000536255 GGA1Q9UJY5 639 aa16.99■□□□□ 0.31
RPAIN-205ENST00000536255 GJA3Q9Y6H8 435 aa16.99■□□□□ 0.31
RPAIN-205ENST00000536255 ANKRD18BA2A2Z9 1011 aa16.98■□□□□ 0.31
RPAIN-205ENST00000536255 RIMBP2O15034 1052 aa16.98■□□□□ 0.31
RPAIN-205ENST00000536255 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-205ENST00000536255 IFIT5Q13325 482 aaKnown RBP16.98■□□□□ 0.31
RPAIN-205ENST00000536255 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
RPAIN-205ENST00000536255 GPR101Q96P66 508 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-205ENST00000536255 MINPP1Q9UNW1 487 aa16.98■□□□□ 0.31
RPAIN-205ENST00000536255 CHMP3Q9Y3E7 222 aa16.98■□□□□ 0.31
RPAIN-205ENST00000536255 GNAI3P08754 354 aa16.97■□□□□ 0.31
RPAIN-205ENST00000536255 CXCL9Q07325 125 aa16.97■□□□□ 0.31
RPAIN-205ENST00000536255 FSTL1Q12841 308 aa16.97■□□□□ 0.31
RPAIN-205ENST00000536255 TMEM57Q8N5G2 664 aa16.97■□□□□ 0.31
RPAIN-205ENST00000536255 SMC1BQ8NDV3 1235 aa16.97■□□□□ 0.31
RPAIN-205ENST00000536255 MPHOSPH8Q99549 860 aa16.97■□□□□ 0.31
RPAIN-205ENST00000536255 HACL1Q9UJ83 578 aa16.97■□□□□ 0.31
RPAIN-205ENST00000536255 SPEF2Q9C093 1822 aa16.97■□□□□ 0.31
RPAIN-205ENST00000536255 SCN4AP35499 1836 aa16.96■□□□□ 0.31
RPAIN-205ENST00000536255 ATP2B4P23634 1241 aa16.96■□□□□ 0.31
RPAIN-205ENST00000536255 KAZALD1Q96I82 304 aa16.96■□□□□ 0.31
RPAIN-205ENST00000536255 ZC3H12CQ9C0D7 883 aaKnown RBP16.96■□□□□ 0.31
RPAIN-205ENST00000536255 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-205ENST00000536255 TNNQ9UQP3 1299 aa16.96■□□□□ 0.31
RPAIN-205ENST00000536255 YDJCA8MPS7 323 aa16.95■□□□□ 0.3
RPAIN-205ENST00000536255 HSPA6P17066 643 aa16.95■□□□□ 0.3
RPAIN-205ENST00000536255 CCDC57Q2TAC2 916 aa16.95■□□□□ 0.3
RPAIN-205ENST00000536255 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
RPAIN-205ENST00000536255 ITPRIPQ8IWB1 547 aa16.95■□□□□ 0.3
RPAIN-205ENST00000536255 DBNDD1Q9H9R9 158 aa16.95■□□□□ 0.3
RPAIN-205ENST00000536255 ECE2O60344 883 aa16.94■□□□□ 0.3
RPAIN-205ENST00000536255 RAD17O75943 681 aa16.94■□□□□ 0.3
RPAIN-205ENST00000536255 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-205ENST00000536255 EPHX2P34913 555 aa16.94■□□□□ 0.3
RPAIN-205ENST00000536255 SCNN1DP51172 638 aa16.94■□□□□ 0.3
RPAIN-205ENST00000536255 TNIP1Q15025 636 aa16.94■□□□□ 0.3
RPAIN-205ENST00000536255 DOK7Q18PE1 504 aa16.94■□□□□ 0.3
RPAIN-205ENST00000536255 RABL6Q3YEC7 729 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-205ENST00000536255 MEIS3Q99687 375 aa16.94■□□□□ 0.3
RPAIN-205ENST00000536255 ANKRD2Q9GZV1 360 aa16.94■□□□□ 0.3
RPAIN-205ENST00000536255 BICC1Q9H694 974 aaKnown RBP16.94■□□□□ 0.3
RPAIN-205ENST00000536255 MED23Q9ULK4 1368 aa16.93■□□□□ 0.3
RPAIN-205ENST00000536255 PLIN1O60240 522 aa16.93■□□□□ 0.3
RPAIN-205ENST00000536255 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
RPAIN-205ENST00000536255 POTEJP0CG39 1038 aa16.93■□□□□ 0.3
RPAIN-205ENST00000536255 RLBP1P12271 317 aa16.93■□□□□ 0.3
RPAIN-205ENST00000536255 PDE3AQ14432 1141 aa16.93■□□□□ 0.3
RPAIN-205ENST00000536255 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
RPAIN-205ENST00000536255 PANK1Q8TE04 598 aa16.93■□□□□ 0.3
RPAIN-205ENST00000536255 CHMP4BQ9H444 224 aaKnown RBP16.93■□□□□ 0.3
RPAIN-205ENST00000536255 LEMD3Q9Y2U8 911 aa16.93■□□□□ 0.3
RPAIN-205ENST00000536255 WTIPA6NIX2 430 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-205ENST00000536255 G3V3G9 751 aa16.92■□□□□ 0.3
RPAIN-205ENST00000536255 GMPSP49915 693 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-205ENST00000536255 CHRNDQ07001 517 aa16.92■□□□□ 0.3
RPAIN-205ENST00000536255 EAPPQ56P03 285 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-205ENST00000536255 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
RPAIN-205ENST00000536255 PNMA8AQ86V59 439 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-205ENST00000536255 ANKRD44Q8N8A2 993 aa16.92■□□□□ 0.3
RPAIN-205ENST00000536255 ZNF594Q96JF6 807 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-205ENST00000536255 GNAI2P04899 355 aa16.91■□□□□ 0.3
RPAIN-205ENST00000536255 EPS15P42566 896 aa16.91■□□□□ 0.3
RPAIN-205ENST00000536255 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
RPAIN-205ENST00000536255 LDHAL6AQ6ZMR3 332 aa16.91■□□□□ 0.3
RPAIN-205ENST00000536255 LDHDQ86WU2 507 aa16.91■□□□□ 0.3
RPAIN-205ENST00000536255 GPRC5DQ9NZD1 345 aa16.91■□□□□ 0.3
RPAIN-205ENST00000536255 LRRFIP2Q9Y608 721 aaKnown RBP16.91■□□□□ 0.3
RPAIN-205ENST00000536255 ZNF804BA4D1E1 1349 aa16.91■□□□□ 0.3
RPAIN-205ENST00000536255 PSMD14O00487 310 aa16.9■□□□□ 0.3
RPAIN-205ENST00000536255 MVPQ14764 893 aaKnown RBP16.9■□□□□ 0.3
RPAIN-205ENST00000536255 KCNQ5Q9NR82 932 aa16.9■□□□□ 0.3
RPAIN-205ENST00000536255 DDX19BQ9UMR2 479 aa16.9■□□□□ 0.3
RPAIN-205ENST00000536255 KCNJ4P48050 445 aa16.89■□□□□ 0.29
RPAIN-205ENST00000536255 APLP1P51693 650 aa16.89■□□□□ 0.29
RPAIN-205ENST00000536255 RRP1P56182 461 aaKnown RBP16.89■□□□□ 0.29
RPAIN-205ENST00000536255 CNNM1Q9NRU3 951 aa16.89■□□□□ 0.29
RPAIN-205ENST00000536255 ADAMTSL1Q8N6G6 1762 aa16.89■□□□□ 0.29
RPAIN-205ENST00000536255 ZBTB7BO15156 539 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-205ENST00000536255 TAF5LO75529 589 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms