RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 MAP3K2Q9Y2U5 619 aa13.86□□□□□ -0.19
CCDC60-202ENST00000535685 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
CCDC60-202ENST00000535685 VAMP4O75379 141 aa13.85□□□□□ -0.19
CCDC60-202ENST00000535685 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
CCDC60-202ENST00000535685 IGKV5-2P06315 115 aa13.85□□□□□ -0.19
CCDC60-202ENST00000535685 SCNN1DP51172 638 aa13.85□□□□□ -0.19
CCDC60-202ENST00000535685 HTRA3P83110 453 aa13.85□□□□□ -0.19
CCDC60-202ENST00000535685 COL4A1P02462 1669 aa13.85□□□□□ -0.19
CCDC60-202ENST00000535685 TRPM7Q96QT4 1865 aa13.84□□□□□ -0.19
CCDC60-202ENST00000535685 CXCL9Q07325 125 aa13.84□□□□□ -0.19
CCDC60-202ENST00000535685 NEXNQ0ZGT2 675 aa13.84□□□□□ -0.19
CCDC60-202ENST00000535685 CCDC152Q4G0S7 254 aa13.84□□□□□ -0.19
CCDC60-202ENST00000535685 PODXL2Q9NZ53 605 aa13.84□□□□□ -0.19
CCDC60-202ENST00000535685 LMOD1P29536 600 aaPredicted RBP13.83□□□□□ -0.2
CCDC60-202ENST00000535685 RTL5Q5HYW3 569 aaPredicted RBP13.83□□□□□ -0.2
CCDC60-202ENST00000535685 USP50Q70EL3 339 aaPredicted RBP13.83□□□□□ -0.2
CCDC60-202ENST00000535685 G2E3Q7L622 706 aa13.83□□□□□ -0.2
CCDC60-202ENST00000535685 GJA3Q9Y6H8 435 aa13.83□□□□□ -0.2
CCDC60-202ENST00000535685 PCNTO95613 3336 aa13.83□□□□□ -0.2
CCDC60-202ENST00000535685 PSME4Q14997 1843 aa13.83□□□□□ -0.2
CCDC60-202ENST00000535685 RTL9Q8NET4 1388 aa13.83□□□□□ -0.2
CCDC60-202ENST00000535685 NEURL1BA8MQ27 555 aa13.82□□□□□ -0.2
CCDC60-202ENST00000535685 H7C1W4 665 aa13.82□□□□□ -0.2
CCDC60-202ENST00000535685 FLIIQ13045 1269 aa13.82□□□□□ -0.2
CCDC60-202ENST00000535685 TNIP1Q15025 636 aa13.82□□□□□ -0.2
CCDC60-202ENST00000535685 CIAPIN1Q6FI81 312 aa13.82□□□□□ -0.2
CCDC60-202ENST00000535685 ZNF428Q96B54 188 aa13.82□□□□□ -0.2
CCDC60-202ENST00000535685 PLA2G12BQ9BX93 195 aa13.82□□□□□ -0.2
CCDC60-202ENST00000535685 GPRC5DQ9NZD1 345 aa13.82□□□□□ -0.2
CCDC60-202ENST00000535685 ZNF521Q96K83 1311 aa13.82□□□□□ -0.2
CCDC60-202ENST00000535685 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
CCDC60-202ENST00000535685 EPS15P42566 896 aa13.81□□□□□ -0.2
CCDC60-202ENST00000535685 GPSM2P81274 684 aa13.81□□□□□ -0.2
CCDC60-202ENST00000535685 EXOSC9Q06265 439 aaKnown RBP13.81□□□□□ -0.2
CCDC60-202ENST00000535685 WASHC4Q2M389 1173 aa13.81□□□□□ -0.2
CCDC60-202ENST00000535685 EAPPQ56P03 285 aaPredicted RBP13.81□□□□□ -0.2
CCDC60-202ENST00000535685 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
CCDC60-202ENST00000535685 EYA3Q99504 573 aa13.81□□□□□ -0.2
CCDC60-202ENST00000535685 MYH16Q9H6N6 1097 aa13.81□□□□□ -0.2
CCDC60-202ENST00000535685 SEC31BQ9NQW1 1179 aa13.81□□□□□ -0.2
CCDC60-202ENST00000535685 ADARB2Q9NS39 739 aaKnown RBP13.81□□□□□ -0.2
CCDC60-202ENST00000535685 POLLQ9UGP5 575 aa13.81□□□□□ -0.2
CCDC60-202ENST00000535685 NSFL1CQ9UNZ2 370 aaKnown RBP13.81□□□□□ -0.2
CCDC60-202ENST00000535685 SCN9AQ15858 1988 aa13.81□□□□□ -0.2
CCDC60-202ENST00000535685 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.8□□□□□ -0.2
CCDC60-202ENST00000535685 YDJCA8MPS7 323 aa13.8□□□□□ -0.2
CCDC60-202ENST00000535685 CTSWP56202 376 aa13.8□□□□□ -0.2
CCDC60-202ENST00000535685 FAM9BQ8IZU0 186 aa13.8□□□□□ -0.2
CCDC60-202ENST00000535685 TTLL11Q8NHH1 800 aa13.8□□□□□ -0.2
CCDC60-202ENST00000535685 TBC1D16Q8TBP0 767 aa13.8□□□□□ -0.2
CCDC60-202ENST00000535685 DNAAF4Q8WXU2 420 aa13.8□□□□□ -0.2
CCDC60-202ENST00000535685 ZFP91Q96JP5 570 aaPredicted RBP13.8□□□□□ -0.2
CCDC60-202ENST00000535685 PGAP2Q9UHJ9 254 aa13.8□□□□□ -0.2
CCDC60-202ENST00000535685 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
CCDC60-202ENST00000535685 TMEM88BA6NKF7 163 aa13.79□□□□□ -0.2
CCDC60-202ENST00000535685 CASP7P55210 303 aa13.79□□□□□ -0.2
CCDC60-202ENST00000535685 GCKRQ14397 625 aa13.79□□□□□ -0.2
CCDC60-202ENST00000535685 ANKRD18AQ8IVF6 992 aa13.79□□□□□ -0.2
CCDC60-202ENST00000535685 LINS1Q8NG48 757 aa13.79□□□□□ -0.2
CCDC60-202ENST00000535685 DPF2Q92785 391 aa13.79□□□□□ -0.2
CCDC60-202ENST00000535685 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
CCDC60-202ENST00000535685 STK24Q9Y6E0 443 aa13.79□□□□□ -0.2
CCDC60-202ENST00000535685 C6orf229H3BNL8 230 aa13.78□□□□□ -0.2
CCDC60-202ENST00000535685 GMPSP49915 693 aaPredicted RBP13.78□□□□□ -0.2
CCDC60-202ENST00000535685 FKBP5Q13451 457 aaPredicted RBP13.78□□□□□ -0.2
CCDC60-202ENST00000535685 CWF19L2Q2TBE0 894 aaKnown RBP13.78□□□□□ -0.2
CCDC60-202ENST00000535685 MAP1SQ66K74 1059 aaPredicted RBP13.78□□□□□ -0.2
CCDC60-202ENST00000535685 ZC3H15Q8WU90 426 aaKnown RBP13.78□□□□□ -0.2
CCDC60-202ENST00000535685 JARID2Q92833 1246 aaPredicted RBP13.78□□□□□ -0.2
CCDC60-202ENST00000535685 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
CCDC60-202ENST00000535685 BSDC1Q9NW68 430 aaPredicted RBP13.78□□□□□ -0.2
CCDC60-202ENST00000535685 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
CCDC60-202ENST00000535685 CNTNAP1P78357 1384 aa13.78□□□□□ -0.2
CCDC60-202ENST00000535685 ZNF609O15014 1411 aa13.78□□□□□ -0.2
CCDC60-202ENST00000535685 GTPBP6O43824 516 aaPredicted RBP13.77□□□□□ -0.21
CCDC60-202ENST00000535685 RAD17O75943 681 aa13.77□□□□□ -0.21
CCDC60-202ENST00000535685 CSF1RP07333 972 aa13.77□□□□□ -0.21
CCDC60-202ENST00000535685 RPS12P25398 132 aaKnown RBP13.77□□□□□ -0.21
CCDC60-202ENST00000535685 XDHP47989 1333 aa13.77□□□□□ -0.21
CCDC60-202ENST00000535685 SPEF2Q9C093 1822 aa13.77□□□□□ -0.21
CCDC60-202ENST00000535685 ZC3H12CQ9C0D7 883 aaKnown RBP13.77□□□□□ -0.21
CCDC60-202ENST00000535685 GGA1Q9UJY5 639 aa13.77□□□□□ -0.21
CCDC60-202ENST00000535685 ATP2B4P23634 1241 aa13.76□□□□□ -0.21
CCDC60-202ENST00000535685 UBE3BQ7Z3V4 1068 aa13.76□□□□□ -0.21
CCDC60-202ENST00000535685 RASSF10A6NK89 507 aa13.75□□□□□ -0.21
CCDC60-202ENST00000535685 PSMD14O00487 310 aa13.75□□□□□ -0.21
CCDC60-202ENST00000535685 ECE2O60344 883 aa13.75□□□□□ -0.21
CCDC60-202ENST00000535685 UFL1O94874 794 aa13.75□□□□□ -0.21
CCDC60-202ENST00000535685 VIL1P09327 827 aaKnown RBP13.75□□□□□ -0.21
CCDC60-202ENST00000535685 BEND3Q5T5X7 828 aa13.75□□□□□ -0.21
CCDC60-202ENST00000535685 BCL2L13Q9BXK5 485 aa13.75□□□□□ -0.21
CCDC60-202ENST00000535685 GREM2Q9H772 168 aa13.75□□□□□ -0.21
CCDC60-202ENST00000535685 DBNDD1Q9H9R9 158 aa13.75□□□□□ -0.21
CCDC60-202ENST00000535685 ANKIB1Q9P2G1 1089 aa13.75□□□□□ -0.21
CCDC60-202ENST00000535685 CNOT7Q9UIV1 285 aaKnown RBP13.75□□□□□ -0.21
CCDC60-202ENST00000535685 H7C1D1 291 aa13.74□□□□□ -0.21
CCDC60-202ENST00000535685 RIMBP2O15034 1052 aa13.74□□□□□ -0.21
CCDC60-202ENST00000535685 PRKAR2AP13861 404 aaKnown RBP13.74□□□□□ -0.21
CCDC60-202ENST00000535685 HIRAP54198 1017 aaPredicted RBP13.74□□□□□ -0.21
CCDC60-202ENST00000535685 MINPP1Q9UNW1 487 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms