RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 ZNF594Q96JF6 807 aaPredicted RBP30.23■■■□□ 2.43
SIPA1-210ENST00000534406 A0A1B0GUL6 1792 aa30.23■■■□□ 2.43
SIPA1-210ENST00000534406 GPSM2P81274 684 aa30.22■■■□□ 2.43
SIPA1-210ENST00000534406 ZNF277Q9NRM2 450 aaPredicted RBP30.22■■■□□ 2.43
SIPA1-210ENST00000534406 NSFL1CQ9UNZ2 370 aaKnown RBP30.22■■■□□ 2.43
SIPA1-210ENST00000534406 PRELPP51888 382 aa30.21■■■□□ 2.43
SIPA1-210ENST00000534406 RTFDC1Q9BY42 306 aaPredicted RBP30.21■■■□□ 2.43
SIPA1-210ENST00000534406 ANKIB1Q9P2G1 1089 aa30.21■■■□□ 2.43
SIPA1-210ENST00000534406 XDHP47989 1333 aa30.21■■■□□ 2.43
SIPA1-210ENST00000534406 MTX1Q13505 466 aa30.2■■■□□ 2.43
SIPA1-210ENST00000534406 LDHAL6AQ6ZMR3 332 aa30.2■■■□□ 2.43
SIPA1-210ENST00000534406 CHMP4BQ9H444 224 aaKnown RBP30.2■■■□□ 2.43
SIPA1-210ENST00000534406 CNNM1Q9NRU3 951 aa30.2■■■□□ 2.43
SIPA1-210ENST00000534406 PODXL2Q9NZ53 605 aa30.2■■■□□ 2.43
SIPA1-210ENST00000534406 MINPP1Q9UNW1 487 aa30.2■■■□□ 2.43
SIPA1-210ENST00000534406 IARSP41252 1262 aaKnown RBP30.19■■■□□ 2.42
SIPA1-210ENST00000534406 C1orf115Q9H7X2 142 aa30.19■■■□□ 2.42
SIPA1-210ENST00000534406 GGA1Q9UJY5 639 aa30.18■■■□□ 2.42
SIPA1-210ENST00000534406 UFL1O94874 794 aa30.17■■■□□ 2.42
SIPA1-210ENST00000534406 RFX5P48382 616 aaPredicted RBP30.17■■■□□ 2.42
SIPA1-210ENST00000534406 ANKRD2Q9GZV1 360 aa30.17■■■□□ 2.42
SIPA1-210ENST00000534406 C6orf229H3BNL8 230 aa30.16■■■□□ 2.42
SIPA1-210ENST00000534406 SRGAP3O43295 1099 aa30.16■■■□□ 2.42
SIPA1-210ENST00000534406 CHRNDQ07001 517 aa30.16■■■□□ 2.42
SIPA1-210ENST00000534406 KLHDC4Q8TBB5 520 aa30.16■■■□□ 2.42
SIPA1-210ENST00000534406 TBC1D16Q8TBP0 767 aa30.16■■■□□ 2.42
SIPA1-210ENST00000534406 ZC3H4Q9UPT8 1303 aaKnown RBP30.16■■■□□ 2.42
SIPA1-210ENST00000534406 PPIP5K2O43314 1243 aa30.15■■■□□ 2.42
SIPA1-210ENST00000534406 ATP2B4P23634 1241 aa30.15■■■□□ 2.42
SIPA1-210ENST00000534406 VPS33BQ9H267 617 aa30.15■■■□□ 2.42
SIPA1-210ENST00000534406 POLLQ9UGP5 575 aa30.15■■■□□ 2.42
SIPA1-210ENST00000534406 YY1P25490 414 aa30.14■■■□□ 2.42
SIPA1-210ENST00000534406 PTPN12Q05209 780 aaKnown RBP30.14■■■□□ 2.42
SIPA1-210ENST00000534406 EYA3Q99504 573 aa30.14■■■□□ 2.42
SIPA1-210ENST00000534406 ZBTB40Q9NUA8 1239 aa30.14■■■□□ 2.42
SIPA1-210ENST00000534406 AOC3Q16853 763 aa30.13■■■□□ 2.41
SIPA1-210ENST00000534406 LARGE2Q8N3Y3 721 aa30.13■■■□□ 2.41
SIPA1-210ENST00000534406 PUS3Q9BZE2 481 aaKnown RBP30.13■■■□□ 2.41
SIPA1-210ENST00000534406 COL4A5P29400 1685 aa30.13■■■□□ 2.41
SIPA1-210ENST00000534406 KIAA2012Q0VF49 1180 aa30.12■■■□□ 2.41
SIPA1-210ENST00000534406 MROH5Q6ZUA9 1318 aa30.12■■■□□ 2.41
SIPA1-210ENST00000534406 LRRC24Q50LG9 513 aa30.11■■■□□ 2.41
SIPA1-210ENST00000534406 FBXO3Q9UK99 471 aa30.11■■■□□ 2.41
SIPA1-210ENST00000534406 RIPOR2Q9Y4F9 1068 aa30.11■■■□□ 2.41
SIPA1-210ENST00000534406 PNMA6EA0A0J9YXQ4 647 aa30.1■■■□□ 2.41
SIPA1-210ENST00000534406 EYA2O00167 538 aa30.1■■■□□ 2.41
SIPA1-210ENST00000534406 KCNJ4P48050 445 aa30.1■■■□□ 2.41
SIPA1-210ENST00000534406 WASHC4Q2M389 1173 aa30.1■■■□□ 2.41
SIPA1-210ENST00000534406 JDP2Q8WYK2 163 aa30.1■■■□□ 2.41
SIPA1-210ENST00000534406 GPR101Q96P66 508 aaPredicted RBP30.1■■■□□ 2.41
SIPA1-210ENST00000534406 COPRSQ9NQ92 184 aa30.1■■■□□ 2.41
SIPA1-210ENST00000534406 LEMD3Q9Y2U8 911 aa30.1■■■□□ 2.41
SIPA1-210ENST00000534406 SUPT16HQ9Y5B9 1047 aaKnown RBP30.1■■■□□ 2.41
SIPA1-210ENST00000534406 ATP8B2P98198 1209 aa30.09■■■□□ 2.41
SIPA1-210ENST00000534406 CEP85Q6P2H3 762 aa30.09■■■□□ 2.41
SIPA1-210ENST00000534406 NIM1KQ8IY84 436 aa30.09■■■□□ 2.41
SIPA1-210ENST00000534406 HELBQ8NG08 1087 aaPredicted RBP30.09■■■□□ 2.41
SIPA1-210ENST00000534406 SIL1Q9H173 461 aa30.09■■■□□ 2.41
SIPA1-210ENST00000534406 PA2G4Q9UQ80 394 aaKnown RBP30.09■■■□□ 2.41
SIPA1-210ENST00000534406 MED23Q9ULK4 1368 aa30.08■■■□□ 2.41
SIPA1-210ENST00000534406 CIAO1O76071 339 aa30.08■■■□□ 2.41
SIPA1-210ENST00000534406 METTL24Q5JXM2 366 aa30.08■■■□□ 2.41
SIPA1-210ENST00000534406 ZNF804BA4D1E1 1349 aa30.07■■■□□ 2.4
SIPA1-210ENST00000534406 TAF5LO75529 589 aa30.07■■■□□ 2.4
SIPA1-210ENST00000534406 POLA2Q14181 598 aa30.07■■■□□ 2.4
SIPA1-210ENST00000534406 RIMBP2O15034 1052 aa30.06■■■□□ 2.4
SIPA1-210ENST00000534406 SSH3Q8TE77 659 aa30.06■■■□□ 2.4
SIPA1-210ENST00000534406 ZC3H12CQ9C0D7 883 aaKnown RBP30.06■■■□□ 2.4
SIPA1-210ENST00000534406 CRBNQ96SW2 442 aa30.05■■■□□ 2.4
SIPA1-210ENST00000534406 ATG9AQ7Z3C6 839 aa30.04■■■□□ 2.4
SIPA1-210ENST00000534406 WTIPA6NIX2 430 aaPredicted RBP30.03■■■□□ 2.4
SIPA1-210ENST00000534406 IL15P40933 162 aaPredicted RBP30.03■■■□□ 2.4
SIPA1-210ENST00000534406 VGLL2Q8N8G2 317 aa30.03■■■□□ 2.4
SIPA1-210ENST00000534406 FZD9O00144 591 aa30.02■■■□□ 2.4
SIPA1-210ENST00000534406 RPAP2Q8IXW5 612 aaPredicted RBP30.02■■■□□ 2.4
SIPA1-210ENST00000534406 SNAP23O00161 211 aa30.01■■■□□ 2.39
SIPA1-210ENST00000534406 UBE4AQ14139 1066 aa30.01■■■□□ 2.39
SIPA1-210ENST00000534406 DBNDD1Q9H9R9 158 aa30.01■■■□□ 2.39
SIPA1-210ENST00000534406 ZNRF3Q9ULT6 936 aa30.01■■■□□ 2.39
SIPA1-210ENST00000534406 ZNF541Q9H0D2 1346 aa30■■■□□ 2.39
SIPA1-210ENST00000534406 G3V3G9 751 aa30■■■□□ 2.39
SIPA1-210ENST00000534406 HMMRO75330 724 aa30■■■□□ 2.39
SIPA1-210ENST00000534406 PDE8BO95263 885 aa30■■■□□ 2.39
SIPA1-210ENST00000534406 KLRK1P26718 216 aa30■■■□□ 2.39
SIPA1-210ENST00000534406 EIF6P56537 245 aaKnown RBP30■■■□□ 2.39
SIPA1-210ENST00000534406 DCAF8Q5TAQ9 597 aa30■■■□□ 2.39
SIPA1-210ENST00000534406 ECE2O60344 883 aa29.99■■■□□ 2.39
SIPA1-210ENST00000534406 PUM3Q15397 648 aaKnown RBP29.99■■■□□ 2.39
SIPA1-210ENST00000534406 DOK7Q18PE1 504 aa29.99■■■□□ 2.39
SIPA1-210ENST00000534406 CEP126Q9P2H0 1117 aa29.99■■■□□ 2.39
SIPA1-210ENST00000534406 G3BP1Q13283 466 aaKnown RBP eCLIP29.98■■■□□ 2.39
SIPA1-210ENST00000534406 C15orf52Q6ZUT6 534 aaKnown RBP29.98■■■□□ 2.39
SIPA1-210ENST00000534406 KDM2BQ8NHM5 1336 aa29.97■■■□□ 2.39
SIPA1-210ENST00000534406 IRS2Q9Y4H2 1338 aa29.97■■■□□ 2.39
SIPA1-210ENST00000534406 GLTPD2A6NH11 291 aa29.97■■■□□ 2.39
SIPA1-210ENST00000534406 DPY19L2Q6NUT2 758 aa29.97■■■□□ 2.39
SIPA1-210ENST00000534406 TXNRD3Q86VQ6 643 aa29.97■■■□□ 2.39
SIPA1-210ENST00000534406 ZNF526Q8TF50 670 aaPredicted RBP29.97■■■□□ 2.39
SIPA1-210ENST00000534406 SCN9AQ15858 1988 aa29.96■■■□□ 2.39
SIPA1-210ENST00000534406 YDJCA8MPS7 323 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms