RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 DOK7Q18PE1 504 aa16.85■□□□□ 0.29
CMTM1-219ENST00000533953 CCDC57Q2TAC2 916 aa16.85■□□□□ 0.29
CMTM1-219ENST00000533953 SUPT20HQ8NEM7 779 aa16.85■□□□□ 0.29
CMTM1-219ENST00000533953 KLHDC4Q8TBB5 520 aa16.85■□□□□ 0.29
CMTM1-219ENST00000533953 JDP2Q8WYK2 163 aa16.85■□□□□ 0.29
CMTM1-219ENST00000533953 MPHOSPH8Q99549 860 aa16.85■□□□□ 0.29
CMTM1-219ENST00000533953 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
CMTM1-219ENST00000533953 POTECB2RU33 542 aa16.84■□□□□ 0.29
CMTM1-219ENST00000533953 FZD9O00144 591 aa16.84■□□□□ 0.29
CMTM1-219ENST00000533953 UBTFL1P0CB47 393 aaPredicted RBP16.84■□□□□ 0.29
CMTM1-219ENST00000533953 KIAA2012Q0VF49 1180 aa16.84■□□□□ 0.29
CMTM1-219ENST00000533953 WASHC4Q2M389 1173 aa16.84■□□□□ 0.29
CMTM1-219ENST00000533953 DPY19L2Q6NUT2 758 aa16.84■□□□□ 0.29
CMTM1-219ENST00000533953 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
CMTM1-219ENST00000533953 RCAN3Q9UKA8 241 aa16.84■□□□□ 0.29
CMTM1-219ENST00000533953 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
CMTM1-219ENST00000533953 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
CMTM1-219ENST00000533953 TAF5LO75529 589 aa16.83■□□□□ 0.28
CMTM1-219ENST00000533953 RABL6Q3YEC7 729 aaPredicted RBP16.83■□□□□ 0.28
CMTM1-219ENST00000533953 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.28
CMTM1-219ENST00000533953 KDM2BQ8NHM5 1336 aa16.83■□□□□ 0.28
CMTM1-219ENST00000533953 DBNDD1Q9H9R9 158 aa16.83■□□□□ 0.28
CMTM1-219ENST00000533953 KCNQ5Q9NR82 932 aa16.83■□□□□ 0.28
CMTM1-219ENST00000533953 DUOX1Q9NRD9 1551 aa16.83■□□□□ 0.28
CMTM1-219ENST00000533953 PODXL2Q9NZ53 605 aa16.83■□□□□ 0.28
CMTM1-219ENST00000533953 GGA1Q9UJY5 639 aa16.83■□□□□ 0.28
CMTM1-219ENST00000533953 LRRFIP2Q9Y608 721 aaKnown RBP16.83■□□□□ 0.28
CMTM1-219ENST00000533953 ZC3H4Q9UPT8 1303 aaKnown RBP16.82■□□□□ 0.28
CMTM1-219ENST00000533953 YDJCA8MPS7 323 aa16.82■□□□□ 0.28
CMTM1-219ENST00000533953 RAD17O75943 681 aa16.82■□□□□ 0.28
CMTM1-219ENST00000533953 KLRK1P26718 216 aa16.82■□□□□ 0.28
CMTM1-219ENST00000533953 CHRNDQ07001 517 aa16.82■□□□□ 0.28
CMTM1-219ENST00000533953 PANK1Q8TE04 598 aa16.82■□□□□ 0.28
CMTM1-219ENST00000533953 XDHP47989 1333 aa16.81■□□□□ 0.28
CMTM1-219ENST00000533953 CXCL9Q07325 125 aa16.81■□□□□ 0.28
CMTM1-219ENST00000533953 LDHAL6AQ6ZMR3 332 aa16.81■□□□□ 0.28
CMTM1-219ENST00000533953 TXNRD3Q86VQ6 643 aa16.81■□□□□ 0.28
CMTM1-219ENST00000533953 DZIP1LQ8IYY4 767 aaKnown RBP16.81■□□□□ 0.28
CMTM1-219ENST00000533953 ZNRF3Q9ULT6 936 aa16.81■□□□□ 0.28
CMTM1-219ENST00000533953 ATP2B4P23634 1241 aa16.8■□□□□ 0.28
CMTM1-219ENST00000533953 EIF6P56537 245 aaKnown RBP16.8■□□□□ 0.28
CMTM1-219ENST00000533953 LRRC24Q50LG9 513 aa16.8■□□□□ 0.28
CMTM1-219ENST00000533953 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
CMTM1-219ENST00000533953 CNNM1Q9NRU3 951 aa16.8■□□□□ 0.28
CMTM1-219ENST00000533953 RFX5P48382 616 aaPredicted RBP16.79■□□□□ 0.28
CMTM1-219ENST00000533953 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
CMTM1-219ENST00000533953 EYA3Q99504 573 aa16.79■□□□□ 0.28
CMTM1-219ENST00000533953 VPS33BQ9H267 617 aa16.79■□□□□ 0.28
CMTM1-219ENST00000533953 LRRC37AA6NMS7 1700 aa16.79■□□□□ 0.28
CMTM1-219ENST00000533953 ECE2O60344 883 aa16.78■□□□□ 0.28
CMTM1-219ENST00000533953 VEGFAP15692 232 aaPredicted RBP16.78■□□□□ 0.28
CMTM1-219ENST00000533953 ITPRIPQ8IWB1 547 aa16.78■□□□□ 0.28
CMTM1-219ENST00000533953 ANKRD2Q9GZV1 360 aa16.78■□□□□ 0.28
CMTM1-219ENST00000533953 C1orf115Q9H7X2 142 aa16.78■□□□□ 0.28
CMTM1-219ENST00000533953 TIAM2Q8IVF5 1701 aa16.78■□□□□ 0.28
CMTM1-219ENST00000533953 ZNF804BA4D1E1 1349 aa16.77■□□□□ 0.28
CMTM1-219ENST00000533953 G3V3G9 751 aa16.77■□□□□ 0.28
CMTM1-219ENST00000533953 GNAI3P08754 354 aa16.77■□□□□ 0.28
CMTM1-219ENST00000533953 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
CMTM1-219ENST00000533953 POTEJP0CG39 1038 aa16.77■□□□□ 0.28
CMTM1-219ENST00000533953 DCAF8Q5TAQ9 597 aa16.77■□□□□ 0.28
CMTM1-219ENST00000533953 C20orf194Q5TEA3 1177 aa16.77■□□□□ 0.28
CMTM1-219ENST00000533953 PA2G4Q9UQ80 394 aaKnown RBP16.77■□□□□ 0.28
CMTM1-219ENST00000533953 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
CMTM1-219ENST00000533953 RIPOR2Q9Y4F9 1068 aa16.77■□□□□ 0.28
CMTM1-219ENST00000533953 MYH3P11055 1940 aa16.76■□□□□ 0.27
CMTM1-219ENST00000533953 SHTN1A0MZ66 631 aa16.76■□□□□ 0.27
CMTM1-219ENST00000533953 KCNJ4P48050 445 aa16.76■□□□□ 0.27
CMTM1-219ENST00000533953 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
CMTM1-219ENST00000533953 CIAPIN1Q6FI81 312 aa16.76■□□□□ 0.27
CMTM1-219ENST00000533953 GPC2Q8N158 579 aa16.76■□□□□ 0.27
CMTM1-219ENST00000533953 SIL1Q9H173 461 aa16.76■□□□□ 0.27
CMTM1-219ENST00000533953 LEMD3Q9Y2U8 911 aa16.76■□□□□ 0.27
CMTM1-219ENST00000533953 DICER1Q9UPY3 1922 aaKnown RBP16.75■□□□□ 0.27
CMTM1-219ENST00000533953 PSMD14O00487 310 aa16.75■□□□□ 0.27
CMTM1-219ENST00000533953 ZBTB7BO15156 539 aaPredicted RBP16.75■□□□□ 0.27
CMTM1-219ENST00000533953 EPS15P42566 896 aa16.75■□□□□ 0.27
CMTM1-219ENST00000533953 GMPSP49915 693 aaPredicted RBP16.75■□□□□ 0.27
CMTM1-219ENST00000533953 C1QTNF8P60827 252 aa16.75■□□□□ 0.27
CMTM1-219ENST00000533953 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
CMTM1-219ENST00000533953 COG6Q9Y2V7 657 aa16.75■□□□□ 0.27
CMTM1-219ENST00000533953 LTBP1Q14766 1721 aa16.75■□□□□ 0.27
CMTM1-219ENST00000533953 SPEF2Q9C093 1822 aa16.75■□□□□ 0.27
CMTM1-219ENST00000533953 GNAI2P04899 355 aa16.74■□□□□ 0.27
CMTM1-219ENST00000533953 SCNN1DP51172 638 aa16.74■□□□□ 0.27
CMTM1-219ENST00000533953 L3MBTL3Q96JM7 780 aaPredicted RBP16.74■□□□□ 0.27
CMTM1-219ENST00000533953 PNMA6EA0A0J9YXQ4 647 aa16.73■□□□□ 0.27
CMTM1-219ENST00000533953 METTL24Q5JXM2 366 aa16.73■□□□□ 0.27
CMTM1-219ENST00000533953 ATG9AQ7Z3C6 839 aa16.73■□□□□ 0.27
CMTM1-219ENST00000533953 MXD3Q9BW11 206 aa16.73■□□□□ 0.27
CMTM1-219ENST00000533953 TAF1DQ9H5J8 278 aaPredicted RBP16.73■□□□□ 0.27
CMTM1-219ENST00000533953 HACL1Q9UJ83 578 aa16.73■□□□□ 0.27
CMTM1-219ENST00000533953 IRS2Q9Y4H2 1338 aa16.72■□□□□ 0.27
CMTM1-219ENST00000533953 EYA2O00167 538 aa16.72■□□□□ 0.27
CMTM1-219ENST00000533953 SRGAP3O43295 1099 aa16.72■□□□□ 0.27
CMTM1-219ENST00000533953 TOMM70O94826 608 aa16.72■□□□□ 0.27
CMTM1-219ENST00000533953 EPHX2P34913 555 aa16.72■□□□□ 0.27
CMTM1-219ENST00000533953 TNIP1Q15025 636 aa16.72■□□□□ 0.27
CMTM1-219ENST00000533953 EAPPQ56P03 285 aaPredicted RBP16.72■□□□□ 0.27
CMTM1-219ENST00000533953 FBXW7Q969H0 707 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms