RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 KLRG1Q96E93 195 aa28.29■■■□□ 2.12
BEST1-207ENST00000533521 CCDC85AQ96PX6 553 aaPredicted RBP28.29■■■□□ 2.12
BEST1-207ENST00000533521 ADARB2Q9NS39 739 aaKnown RBP28.29■■■□□ 2.12
BEST1-207ENST00000533521 CT47B1P0C2W7 299 aaPredicted RBP28.28■■■□□ 2.12
BEST1-207ENST00000533521 ATP2B4P23634 1241 aa28.28■■■□□ 2.12
BEST1-207ENST00000533521 EPS15P42566 896 aa28.28■■■□□ 2.12
BEST1-207ENST00000533521 PTPRCP08575 1304 aa28.27■■■□□ 2.12
BEST1-207ENST00000533521 UFL1O94874 794 aa28.27■■■□□ 2.12
BEST1-207ENST00000533521 MRPL50Q8N5N7 158 aaKnown RBP28.27■■■□□ 2.12
BEST1-207ENST00000533521 DPF2Q92785 391 aa28.27■■■□□ 2.12
BEST1-207ENST00000533521 CREBZFQ9NS37 354 aa28.27■■■□□ 2.12
BEST1-207ENST00000533521 GRM8O00222 908 aa28.26■■■□□ 2.11
BEST1-207ENST00000533521 RAD17O75943 681 aa28.26■■■□□ 2.11
BEST1-207ENST00000533521 GMPSP49915 693 aaPredicted RBP28.26■■■□□ 2.11
BEST1-207ENST00000533521 ALDH1L2Q3SY69 923 aa28.26■■■□□ 2.11
BEST1-207ENST00000533521 JMYQ8N9B5 988 aa28.26■■■□□ 2.11
BEST1-207ENST00000533521 MINPP1Q9UNW1 487 aa28.26■■■□□ 2.11
BEST1-207ENST00000533521 CLEC11AQ9Y240 323 aa28.26■■■□□ 2.11
BEST1-207ENST00000533521 RPS12P25398 132 aaKnown RBP28.25■■■□□ 2.11
BEST1-207ENST00000533521 IGHMBP2P38935 993 aaKnown RBP28.25■■■□□ 2.11
BEST1-207ENST00000533521 SRCIN1Q9C0H9 1055 aa28.25■■■□□ 2.11
BEST1-207ENST00000533521 RIMBP2O15034 1052 aa28.24■■■□□ 2.11
BEST1-207ENST00000533521 ECE2O60344 883 aa28.24■■■□□ 2.11
BEST1-207ENST00000533521 ITGA6P23229 1130 aa28.24■■■□□ 2.11
BEST1-207ENST00000533521 CNTROBQ8N137 903 aa28.24■■■□□ 2.11
BEST1-207ENST00000533521 SPEF2Q9C093 1822 aa28.23■■■□□ 2.11
BEST1-207ENST00000533521 HTRA3P83110 453 aa28.23■■■□□ 2.11
BEST1-207ENST00000533521 FOXO4P98177 505 aa28.23■■■□□ 2.11
BEST1-207ENST00000533521 BCL2L13Q9BXK5 485 aa28.23■■■□□ 2.11
BEST1-207ENST00000533521 DBNDD1Q9H9R9 158 aa28.23■■■□□ 2.11
BEST1-207ENST00000533521 ZNF609O15014 1411 aa28.23■■■□□ 2.11
BEST1-207ENST00000533521 PSME4Q14997 1843 aa28.22■■■□□ 2.11
BEST1-207ENST00000533521 FAM161AQ3B820 660 aa28.22■■■□□ 2.11
BEST1-207ENST00000533521 ZC3H15Q8WU90 426 aaKnown RBP28.22■■■□□ 2.11
BEST1-207ENST00000533521 SSH1Q8WYL5 1049 aa28.22■■■□□ 2.11
BEST1-207ENST00000533521 CDCA7LQ96GN5 454 aa28.22■■■□□ 2.11
BEST1-207ENST00000533521 ANKRD2Q9GZV1 360 aa28.22■■■□□ 2.11
BEST1-207ENST00000533521 PGAP2Q9UHJ9 254 aa28.22■■■□□ 2.11
BEST1-207ENST00000533521 LEMD3Q9Y2U8 911 aa28.22■■■□□ 2.11
BEST1-207ENST00000533521 C9orf78Q9NZ63 289 aaPredicted RBP28.21■■■□□ 2.11
BEST1-207ENST00000533521 MED23Q9ULK4 1368 aa28.21■■■□□ 2.11
BEST1-207ENST00000533521 UTYO14607 1347 aa28.2■■■□□ 2.11
BEST1-207ENST00000533521 ANKRD18BA2A2Z9 1011 aa28.2■■■□□ 2.1
BEST1-207ENST00000533521 PSMD14O00487 310 aa28.2■■■□□ 2.1
BEST1-207ENST00000533521 VIL1P09327 827 aaKnown RBP28.2■■■□□ 2.1
BEST1-207ENST00000533521 PODNQ7Z5L7 613 aa28.2■■■□□ 2.1
BEST1-207ENST00000533521 MPHOSPH8Q99549 860 aa28.2■■■□□ 2.1
BEST1-207ENST00000533521 CNOT7Q9UIV1 285 aaKnown RBP28.2■■■□□ 2.1
BEST1-207ENST00000533521 SCN9AQ15858 1988 aa28.2■■■□□ 2.1
BEST1-207ENST00000533521 G3V3G9 751 aa28.19■■■□□ 2.1
BEST1-207ENST00000533521 H7C1D1 291 aa28.19■■■□□ 2.1
BEST1-207ENST00000533521 CCT4P50991 539 aaKnown RBP28.19■■■□□ 2.1
BEST1-207ENST00000533521 BRPF1P55201 1214 aaPredicted RBP28.19■■■□□ 2.1
BEST1-207ENST00000533521 IFIT5Q13325 482 aaKnown RBP28.19■■■□□ 2.1
BEST1-207ENST00000533521 DOK7Q18PE1 504 aa28.19■■■□□ 2.1
BEST1-207ENST00000533521 DCAF8Q5TAQ9 597 aa28.19■■■□□ 2.1
BEST1-207ENST00000533521 MAP1SQ66K74 1059 aaPredicted RBP28.19■■■□□ 2.1
BEST1-207ENST00000533521 SLC4A10Q6U841 1118 aa28.19■■■□□ 2.1
BEST1-207ENST00000533521 TMEM88BA6NKF7 163 aa28.18■■■□□ 2.1
BEST1-207ENST00000533521 DIEXFQ68CQ4 756 aaKnown RBP28.18■■■□□ 2.1
BEST1-207ENST00000533521 GPR101Q96P66 508 aaPredicted RBP28.17■■■□□ 2.1
BEST1-207ENST00000533521 LMBR1LQ6UX01 489 aa28.15■■■□□ 2.1
BEST1-207ENST00000533521 MICALL2Q8IY33 904 aa28.14■■■□□ 2.1
BEST1-207ENST00000533521 AGBL3Q8NEM8 1001 aa28.14■■■□□ 2.1
BEST1-207ENST00000533521 KCNQ5Q9NR82 932 aa28.14■■■□□ 2.1
BEST1-207ENST00000533521 ZBTB12Q9Y330 459 aaPredicted RBP28.14■■■□□ 2.1
BEST1-207ENST00000533521 TRPM7Q96QT4 1865 aa28.14■■■□□ 2.1
BEST1-207ENST00000533521 CCDC57Q2TAC2 916 aa28.13■■■□□ 2.09
BEST1-207ENST00000533521 EPHA10Q5JZY3 1008 aa28.13■■■□□ 2.09
BEST1-207ENST00000533521 COA1Q9GZY4 146 aa28.13■■■□□ 2.09
BEST1-207ENST00000533521 ZNF804BA4D1E1 1349 aa28.13■■■□□ 2.09
BEST1-207ENST00000533521 HIRAP54198 1017 aaPredicted RBP28.12■■■□□ 2.09
BEST1-207ENST00000533521 C15orf52Q6ZUT6 534 aaKnown RBP28.12■■■□□ 2.09
BEST1-207ENST00000533521 CHRNDQ07001 517 aa28.11■■■□□ 2.09
BEST1-207ENST00000533521 RSBN1LQ6PCB5 846 aaPredicted RBP28.11■■■□□ 2.09
BEST1-207ENST00000533521 MIER1Q8N108 512 aa28.11■■■□□ 2.09
BEST1-207ENST00000533521 SMC4Q9NTJ3 1288 aa28.11■■■□□ 2.09
BEST1-207ENST00000533521 CNTNAP1P78357 1384 aa28.11■■■□□ 2.09
BEST1-207ENST00000533521 A0A1B0GUL6 1792 aa28.1■■■□□ 2.09
BEST1-207ENST00000533521 USP17L3A6NCW0 530 aa28.1■■■□□ 2.09
BEST1-207ENST00000533521 USP17L4A6NCW7 530 aa28.1■■■□□ 2.09
BEST1-207ENST00000533521 NBPF7P0C2Y1 421 aaPredicted RBP28.1■■■□□ 2.09
BEST1-207ENST00000533521 MMP14P50281 582 aa28.1■■■□□ 2.09
BEST1-207ENST00000533521 RABL6Q3YEC7 729 aaPredicted RBP28.1■■■□□ 2.09
BEST1-207ENST00000533521 USP17L1Q7RTZ2 530 aa28.1■■■□□ 2.09
BEST1-207ENST00000533521 TRPM4Q8TD43 1214 aa28.1■■■□□ 2.09
BEST1-207ENST00000533521 KAZALD1Q96I82 304 aa28.1■■■□□ 2.09
BEST1-207ENST00000533521 GMLQ99445 158 aa28.1■■■□□ 2.09
BEST1-207ENST00000533521 ZNF280AP59817 542 aaPredicted RBP28.09■■■□□ 2.09
BEST1-207ENST00000533521 CHMP3Q9Y3E7 222 aa28.09■■■□□ 2.09
BEST1-207ENST00000533521 WTIPA6NIX2 430 aaPredicted RBP28.08■■■□□ 2.09
BEST1-207ENST00000533521 CDC37L1Q7L3B6 337 aa28.08■■■□□ 2.09
BEST1-207ENST00000533521 SUCLG2Q96I99 432 aa28.08■■■□□ 2.09
BEST1-207ENST00000533521 RASSF10A6NK89 507 aa28.07■■■□□ 2.08
BEST1-207ENST00000533521 STRIP1Q5VSL9 837 aa28.07■■■□□ 2.08
BEST1-207ENST00000533521 LDHAL6AQ6ZMR3 332 aa28.07■■■□□ 2.08
BEST1-207ENST00000533521 USP44Q9H0E7 712 aa28.07■■■□□ 2.08
BEST1-207ENST00000533521 SHTN1A0MZ66 631 aa28.06■■■□□ 2.08
BEST1-207ENST00000533521 MYO3BQ8WXR4 1341 aa28.06■■■□□ 2.08
BEST1-207ENST00000533521 ZNF646O15015 1829 aaPredicted RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms