RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 HELBQ8NG08 1087 aaPredicted RBP21.68■■□□□ 1.06
NXF1-216ENST00000533499 BCL11AQ9H165 835 aa21.68■■□□□ 1.06
NXF1-216ENST00000533499 EYA2O00167 538 aa21.67■■□□□ 1.06
NXF1-216ENST00000533499 G3BP1Q13283 466 aaKnown RBP eCLIP21.67■■□□□ 1.06
NXF1-216ENST00000533499 SOGA3Q5TF21 947 aa21.67■■□□□ 1.06
NXF1-216ENST00000533499 MPNDQ8N594 471 aa21.67■■□□□ 1.06
NXF1-216ENST00000533499 SSH3Q8TE77 659 aa21.67■■□□□ 1.06
NXF1-216ENST00000533499 APBB1O00213 710 aa21.66■■□□□ 1.06
NXF1-216ENST00000533499 GPSM2P81274 684 aa21.66■■□□□ 1.06
NXF1-216ENST00000533499 AAMPQ13685 434 aa21.66■■□□□ 1.06
NXF1-216ENST00000533499 POLA2Q14181 598 aa21.66■■□□□ 1.06
NXF1-216ENST00000533499 METTL24Q5JXM2 366 aa21.66■■□□□ 1.06
NXF1-216ENST00000533499 DPP8Q6V1X1 898 aaPredicted RBP21.66■■□□□ 1.06
NXF1-216ENST00000533499 C7orf43Q8WVR3 580 aa21.66■■□□□ 1.06
NXF1-216ENST00000533499 COPRSQ9NQ92 184 aa21.66■■□□□ 1.06
NXF1-216ENST00000533499 MINPP1Q9UNW1 487 aa21.66■■□□□ 1.06
NXF1-216ENST00000533499 ARFGEF1Q9Y6D6 1849 aa21.65■■□□□ 1.06
NXF1-216ENST00000533499 TAF5LO75529 589 aa21.65■■□□□ 1.06
NXF1-216ENST00000533499 KCNJ4P48050 445 aa21.65■■□□□ 1.06
NXF1-216ENST00000533499 CHRNDQ07001 517 aa21.65■■□□□ 1.06
NXF1-216ENST00000533499 CC2D2BQ6DHV5 1058 aa21.65■■□□□ 1.06
NXF1-216ENST00000533499 SIRT2Q8IXJ6 389 aa21.65■■□□□ 1.06
NXF1-216ENST00000533499 C6orf229H3BNL8 230 aa21.64■■□□□ 1.05
NXF1-216ENST00000533499 RTKN2Q8IZC4 609 aa21.64■■□□□ 1.05
NXF1-216ENST00000533499 ANKRD2Q9GZV1 360 aa21.64■■□□□ 1.05
NXF1-216ENST00000533499 EXOC6BQ9Y2D4 811 aa21.64■■□□□ 1.05
NXF1-216ENST00000533499 UFL1O94874 794 aa21.63■■□□□ 1.05
NXF1-216ENST00000533499 XDHP47989 1333 aa21.62■■□□□ 1.05
NXF1-216ENST00000533499 MROH5Q6ZUA9 1318 aa21.62■■□□□ 1.05
NXF1-216ENST00000533499 GRIN3BO60391 1043 aa21.62■■□□□ 1.05
NXF1-216ENST00000533499 IL15P40933 162 aaPredicted RBP21.62■■□□□ 1.05
NXF1-216ENST00000533499 RASSF7Q02833 373 aa21.62■■□□□ 1.05
NXF1-216ENST00000533499 GPR101Q96P66 508 aaPredicted RBP21.62■■□□□ 1.05
NXF1-216ENST00000533499 TAOK3Q9H2K8 898 aa21.62■■□□□ 1.05
NXF1-216ENST00000533499 GGA1Q9UJY5 639 aa21.62■■□□□ 1.05
NXF1-216ENST00000533499 RIPOR2Q9Y4F9 1068 aa21.62■■□□□ 1.05
NXF1-216ENST00000533499 CIAO1O76071 339 aa21.61■■□□□ 1.05
NXF1-216ENST00000533499 ATG9AQ7Z3C6 839 aa21.61■■□□□ 1.05
NXF1-216ENST00000533499 CEP126Q9P2H0 1117 aa21.61■■□□□ 1.05
NXF1-216ENST00000533499 RIMBP2O15034 1052 aa21.6■■□□□ 1.05
NXF1-216ENST00000533499 FBXO3Q9UK99 471 aa21.6■■□□□ 1.05
NXF1-216ENST00000533499 LRRC37AA6NMS7 1700 aa21.59■■□□□ 1.05
NXF1-216ENST00000533499 SNAP23O00161 211 aa21.59■■□□□ 1.05
NXF1-216ENST00000533499 ATP2B4P23634 1241 aa21.59■■□□□ 1.05
NXF1-216ENST00000533499 TFCP2Q12800 502 aa21.59■■□□□ 1.05
NXF1-216ENST00000533499 GRIPAP1Q4V328 841 aa21.59■■□□□ 1.05
NXF1-216ENST00000533499 SUPT20HQ8NEM7 779 aa21.59■■□□□ 1.05
NXF1-216ENST00000533499 TBC1D16Q8TBP0 767 aa21.59■■□□□ 1.05
NXF1-216ENST00000533499 RWDD1Q9H446 243 aaPredicted RBP21.59■■□□□ 1.05
NXF1-216ENST00000533499 ZNF277Q9NRM2 450 aaPredicted RBP21.59■■□□□ 1.05
NXF1-216ENST00000533499 WTIPA6NIX2 430 aaPredicted RBP21.58■■□□□ 1.05
NXF1-216ENST00000533499 NFKBIEO00221 500 aa21.58■■□□□ 1.05
NXF1-216ENST00000533499 FKBP4Q02790 459 aaKnown RBP eCLIP21.58■■□□□ 1.05
NXF1-216ENST00000533499 HSP90AB4PQ58FF6 505 aa21.58■■□□□ 1.05
NXF1-216ENST00000533499 POLLQ9UGP5 575 aa21.58■■□□□ 1.05
NXF1-216ENST00000533499 ZNF804BA4D1E1 1349 aa21.57■■□□□ 1.04
NXF1-216ENST00000533499 G3V3G9 751 aa21.57■■□□□ 1.04
NXF1-216ENST00000533499 DCAF8Q5TAQ9 597 aa21.57■■□□□ 1.04
NXF1-216ENST00000533499 LEMD3Q9Y2U8 911 aa21.57■■□□□ 1.04
NXF1-216ENST00000533499 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
NXF1-216ENST00000533499 FER1L6Q2WGJ9 1857 aa21.56■■□□□ 1.04
NXF1-216ENST00000533499 PPIP5K2O43314 1243 aa21.56■■□□□ 1.04
NXF1-216ENST00000533499 PDE8BO95263 885 aa21.56■■□□□ 1.04
NXF1-216ENST00000533499 ERC1Q8IUD2 1116 aa21.56■■□□□ 1.04
NXF1-216ENST00000533499 EYA3Q99504 573 aa21.56■■□□□ 1.04
NXF1-216ENST00000533499 PODXL2Q9NZ53 605 aa21.56■■□□□ 1.04
NXF1-216ENST00000533499 SASH1O94885 1247 aa21.55■■□□□ 1.04
NXF1-216ENST00000533499 WASHC4Q2M389 1173 aa21.55■■□□□ 1.04
NXF1-216ENST00000533499 LARGE2Q8N3Y3 721 aa21.55■■□□□ 1.04
NXF1-216ENST00000533499 NEUROD6Q96NK8 337 aa21.55■■□□□ 1.04
NXF1-216ENST00000533499 PSMD1Q99460 953 aa21.55■■□□□ 1.04
NXF1-216ENST00000533499 ZC3H12CQ9C0D7 883 aaKnown RBP21.55■■□□□ 1.04
NXF1-216ENST00000533499 ZBTB47Q9UFB7 747 aaPredicted RBP21.55■■□□□ 1.04
NXF1-216ENST00000533499 A0A1B0GUL6 1792 aa21.54■■□□□ 1.04
NXF1-216ENST00000533499 HDAC1Q13547 482 aaPredicted RBP21.54■■□□□ 1.04
NXF1-216ENST00000533499 PUM3Q15397 648 aaKnown RBP21.54■■□□□ 1.04
NXF1-216ENST00000533499 ATP2B3Q16720 1220 aa21.54■■□□□ 1.04
NXF1-216ENST00000533499 AOC3Q16853 763 aa21.54■■□□□ 1.04
NXF1-216ENST00000533499 DCTPP1Q9H773 170 aa21.54■■□□□ 1.04
NXF1-216ENST00000533499 IL1RAPL2Q9NP60 686 aa21.54■■□□□ 1.04
NXF1-216ENST00000533499 RAB11FIP3O75154 756 aa21.53■■□□□ 1.04
NXF1-216ENST00000533499 IGHDP01880 384 aa21.53■■□□□ 1.04
NXF1-216ENST00000533499 IFIT1P09914 478 aaKnown RBP21.53■■□□□ 1.04
NXF1-216ENST00000533499 SLC5A1P13866 664 aa21.53■■□□□ 1.04
NXF1-216ENST00000533499 KLRK1P26718 216 aa21.53■■□□□ 1.04
NXF1-216ENST00000533499 IARSP41252 1262 aaKnown RBP21.53■■□□□ 1.04
NXF1-216ENST00000533499 VGLL2Q8N8G2 317 aa21.53■■□□□ 1.04
NXF1-216ENST00000533499 AKAP2Q9Y2D5 859 aa21.53■■□□□ 1.04
NXF1-216ENST00000533499 CCDC88AQ3V6T2 1871 aa21.53■■□□□ 1.04
NXF1-216ENST00000533499 UBE4AQ14139 1066 aa21.52■■□□□ 1.04
NXF1-216ENST00000533499 DOK7Q18PE1 504 aa21.52■■□□□ 1.04
NXF1-216ENST00000533499 B4GALNT3Q6L9W6 998 aa21.52■■□□□ 1.04
NXF1-216ENST00000533499 RHPN1Q8TCX5 695 aa21.52■■□□□ 1.04
NXF1-216ENST00000533499 KIF1BPQ96EK5 621 aa21.52■■□□□ 1.04
NXF1-216ENST00000533499 RTFDC1Q9BY42 306 aaPredicted RBP21.52■■□□□ 1.04
NXF1-216ENST00000533499 RNF181Q9P0P0 153 aa21.52■■□□□ 1.04
NXF1-216ENST00000533499 DUOX1Q9NRD9 1551 aa21.52■■□□□ 1.04
NXF1-216ENST00000533499 SMARCA5O60264 1052 aaPredicted RBP21.51■■□□□ 1.03
NXF1-216ENST00000533499 LMNB1P20700 586 aa21.51■■□□□ 1.03
NXF1-216ENST00000533499 TIMM10P62072 90 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms