RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	CNTNAP1	P78357	1384 aa		12.5	□□□□□ -0.41
PPFIA1-223	ENST00000532793	DDX60	Q8IY21	1712 aa	Known RBP	12.5	□□□□□ -0.41
PPFIA1-223	ENST00000532793	TAF1	P21675	1872 aa		12.5	□□□□□ -0.41
PPFIA1-223	ENST00000532793	HCLS1	P14317	486 aa	Predicted RBP	12.49	□□□□□ -0.41
PPFIA1-223	ENST00000532793	GOLGA2	Q08379	1002 aa		12.49	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ANKRD13D	Q6ZTN6	518 aa		12.49	□□□□□ -0.41
PPFIA1-223	ENST00000532793	TMC4	Q7Z404	712 aa		12.49	□□□□□ -0.41
PPFIA1-223	ENST00000532793	SP8	Q8IXZ3	490 aa		12.49	□□□□□ -0.41
PPFIA1-223	ENST00000532793	PLBD2	Q8NHP8	589 aa		12.49	□□□□□ -0.41
PPFIA1-223	ENST00000532793	CFAP44	Q96MT7	982 aa		12.49	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ABT1	Q9ULW3	272 aa	Known RBP	12.49	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ADAMTS8	Q9UP79	889 aa		12.49	□□□□□ -0.41
PPFIA1-223	ENST00000532793	COL4A5	P29400	1685 aa		12.48	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ITGBL1	O95965	494 aa	Predicted RBP	12.48	□□□□□ -0.41
PPFIA1-223	ENST00000532793	GRAP	Q13588	217 aa		12.48	□□□□□ -0.41
PPFIA1-223	ENST00000532793	KRT24	Q2M2I5	525 aa		12.48	□□□□□ -0.41
PPFIA1-223	ENST00000532793	USP50	Q70EL3	339 aa	Predicted RBP	12.48	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ZNF687	Q8N1G0	1237 aa		12.48	□□□□□ -0.41
PPFIA1-223	ENST00000532793	GRAPL	Q8TC17	118 aa	Predicted RBP	12.48	□□□□□ -0.41
PPFIA1-223	ENST00000532793	BCL2L13	Q9BXK5	485 aa		12.48	□□□□□ -0.41
PPFIA1-223	ENST00000532793	HYPK	Q9NX55	129 aa		12.48	□□□□□ -0.41
PPFIA1-223	ENST00000532793	LTBP1	Q14766	1721 aa		12.48	□□□□□ -0.41
PPFIA1-223	ENST00000532793	HSP90B1	P14625	803 aa	Known RBP	12.47	□□□□□ -0.41
PPFIA1-223	ENST00000532793	DEFB115	Q30KQ5	88 aa		12.47	□□□□□ -0.41
PPFIA1-223	ENST00000532793	DUSP27	Q5VZP5	1158 aa		12.47	□□□□□ -0.41
PPFIA1-223	ENST00000532793	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.47	□□□□□ -0.41
PPFIA1-223	ENST00000532793	CHMP4A	Q9BY43	222 aa		12.47	□□□□□ -0.41
PPFIA1-223	ENST00000532793	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.47	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ZNRF3	Q9ULT6	936 aa		12.47	□□□□□ -0.41
PPFIA1-223	ENST00000532793	LRRC37A	A6NMS7	1700 aa		12.47	□□□□□ -0.41
PPFIA1-223	ENST00000532793	EPS15	P42566	896 aa		12.46	□□□□□ -0.41
PPFIA1-223	ENST00000532793	SCNN1D	P51172	638 aa		12.46	□□□□□ -0.41
PPFIA1-223	ENST00000532793	GNAI1	P63096	354 aa		12.46	□□□□□ -0.41
PPFIA1-223	ENST00000532793	TNIP1	Q15025	636 aa		12.46	□□□□□ -0.41
PPFIA1-223	ENST00000532793	CIAPIN1	Q6FI81	312 aa		12.46	□□□□□ -0.41
PPFIA1-223	ENST00000532793	RIC3	Q7Z5B4	369 aa		12.46	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ADARB2	Q9NS39	739 aa	Known RBP	12.46	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ATP5J2-PTCD1	G3V325	749 aa		12.45	□□□□□ -0.42
PPFIA1-223	ENST00000532793	VEGFB	P49765	207 aa		12.45	□□□□□ -0.42
PPFIA1-223	ENST00000532793	KIAA2012	Q0VF49	1180 aa		12.45	□□□□□ -0.42
PPFIA1-223	ENST00000532793	DOK7	Q18PE1	504 aa		12.45	□□□□□ -0.42
PPFIA1-223	ENST00000532793	ZNF428	Q96B54	188 aa		12.45	□□□□□ -0.42
PPFIA1-223	ENST00000532793	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.45	□□□□□ -0.42
PPFIA1-223	ENST00000532793	MBIP	Q9NS73	344 aa		12.45	□□□□□ -0.42
PPFIA1-223	ENST00000532793	GPRC5D	Q9NZD1	345 aa		12.45	□□□□□ -0.42
PPFIA1-223	ENST00000532793	CDHR2	Q9BYE9	1310 aa		12.44	□□□□□ -0.42
PPFIA1-223	ENST00000532793	RASSF10	A6NK89	507 aa		12.44	□□□□□ -0.42
PPFIA1-223	ENST00000532793	APAF1	O14727	1248 aa		12.44	□□□□□ -0.42
PPFIA1-223	ENST00000532793	ECE1	P42892	770 aa		12.44	□□□□□ -0.42
PPFIA1-223	ENST00000532793	CXCL9	Q07325	125 aa		12.44	□□□□□ -0.42
PPFIA1-223	ENST00000532793	FAM89A	Q96GI7	184 aa		12.44	□□□□□ -0.42
PPFIA1-223	ENST00000532793	BEGAIN	Q9BUH8	593 aa		12.44	□□□□□ -0.42
PPFIA1-223	ENST00000532793	IFT57	Q9NWB7	429 aa		12.44	□□□□□ -0.42
PPFIA1-223	ENST00000532793	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.44	□□□□□ -0.42
PPFIA1-223	ENST00000532793	BOLA1	Q9Y3E2	137 aa		12.44	□□□□□ -0.42
PPFIA1-223	ENST00000532793		G3V3G9	751 aa		12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	C6orf229	H3BNL8	230 aa		12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	DDX58	O95786	925 aa	Known RBP	12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	CTCF	P49711	727 aa	Predicted RBP	12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	GMPS	P49915	693 aa	Predicted RBP	12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	MAP2K1	Q02750	393 aa	Predicted RBP	12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	GRM1	Q13255	1194 aa		12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	WASHC4	Q2M389	1173 aa		12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	RTL5	Q5HYW3	569 aa	Predicted RBP	12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	SLC51A	Q86UW1	340 aa		12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	EYA3	Q99504	573 aa		12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	ISCA1	Q9BUE6	129 aa		12.43	□□□□□ -0.42
PPFIA1-223	ENST00000532793	WDR33	Q9C0J8	1336 aa	Known RBP	12.42	□□□□□ -0.42
PPFIA1-223	ENST00000532793		H7C1D1	291 aa		12.42	□□□□□ -0.42
PPFIA1-223	ENST00000532793	ELL2	O00472	640 aa	Predicted RBP	12.42	□□□□□ -0.42
PPFIA1-223	ENST00000532793	IRS4	O14654	1257 aa	Predicted RBP	12.42	□□□□□ -0.42
PPFIA1-223	ENST00000532793	RAD17	O75943	681 aa		12.42	□□□□□ -0.42
PPFIA1-223	ENST00000532793	MYH3	P11055	1940 aa		12.42	□□□□□ -0.42
PPFIA1-223	ENST00000532793	FOXN1	O15353	648 aa		12.41	□□□□□ -0.42
PPFIA1-223	ENST00000532793	SF3B3	Q15393	1217 aa	Known RBP	12.41	□□□□□ -0.42
PPFIA1-223	ENST00000532793	CCDC30	Q5VVM6	783 aa		12.41	□□□□□ -0.42
PPFIA1-223	ENST00000532793	CELF1	Q92879	486 aa	Known RBP	12.41	□□□□□ -0.42
PPFIA1-223	ENST00000532793	MYD88	Q99836	296 aa		12.41	□□□□□ -0.42
PPFIA1-223	ENST00000532793	PRDM10	Q9NQV6	1147 aa		12.41	□□□□□ -0.42
PPFIA1-223	ENST00000532793	DUOX1	Q9NRD9	1551 aa		12.41	□□□□□ -0.42
PPFIA1-223	ENST00000532793	RIMBP2	O15034	1052 aa		12.4	□□□□□ -0.42
PPFIA1-223	ENST00000532793	TRIM28	Q13263	835 aa	Known RBP	12.4	□□□□□ -0.42
PPFIA1-223	ENST00000532793	CCDC152	Q4G0S7	254 aa		12.4	□□□□□ -0.42
PPFIA1-223	ENST00000532793	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.4	□□□□□ -0.42
PPFIA1-223	ENST00000532793	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.4	□□□□□ -0.42
PPFIA1-223	ENST00000532793	STK31	Q9BXU1	1019 aa		12.4	□□□□□ -0.42
PPFIA1-223	ENST00000532793	PHAX	Q9H814	394 aa	Known RBP	12.4	□□□□□ -0.42
PPFIA1-223	ENST00000532793	ZNF408	Q9H9D4	720 aa		12.4	□□□□□ -0.42
PPFIA1-223	ENST00000532793	DBNDD1	Q9H9R9	158 aa		12.4	□□□□□ -0.42
PPFIA1-223	ENST00000532793	CNOT7	Q9UIV1	285 aa	Known RBP	12.4	□□□□□ -0.42
PPFIA1-223	ENST00000532793	SPEF2	Q9C093	1822 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	TRAF5	O00463	557 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	CELF2	O95319	508 aa	Known RBP	12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	ZNF853	P0CG23	659 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	PSEN1	P49768	467 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	RPS8	P62241	208 aa	Known RBP	12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	NEXN	Q0ZGT2	675 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	CDC37L1	Q7L3B6	337 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	MICALL2	Q8IY33	904 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	CCDC191	Q8NCU4	936 aa		12.39	□□□□□ -0.43

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