RNA–Protein interactions for RNA: ENST00000532014.1

TRIM53AP-201, Transcript of tripartite motif containing 53A, pseudogene, humanhuman

BASIC

Gene TRIM53AP, Length 1,544 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53AP-201ENST00000532014 WTIPA6NIX2 430 aaPredicted RBP11.59□□□□□ -0.55
TRIM53AP-201ENST00000532014 ALDH1B1P30837 517 aa11.59□□□□□ -0.55
TRIM53AP-201ENST00000532014 RPS8P62241 208 aaKnown RBP11.59□□□□□ -0.55
TRIM53AP-201ENST00000532014 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
TRIM53AP-201ENST00000532014 LRRC24Q50LG9 513 aa11.59□□□□□ -0.55
TRIM53AP-201ENST00000532014 ATG9AQ7Z3C6 839 aa11.59□□□□□ -0.55
TRIM53AP-201ENST00000532014 CNKSR1Q969H4 720 aa11.59□□□□□ -0.55
TRIM53AP-201ENST00000532014 SBF1O95248 1867 aa11.59□□□□□ -0.55
TRIM53AP-201ENST00000532014 CCDC88AQ3V6T2 1871 aa11.59□□□□□ -0.55
TRIM53AP-201ENST00000532014 PPEF1O14829 653 aaPredicted RBP11.58□□□□□ -0.56
TRIM53AP-201ENST00000532014 C21orf2O43822 256 aa11.58□□□□□ -0.56
TRIM53AP-201ENST00000532014 DALRD3Q5D0E6 543 aaKnown RBP11.58□□□□□ -0.56
TRIM53AP-201ENST00000532014 COPRSQ9NQ92 184 aa11.58□□□□□ -0.56
TRIM53AP-201ENST00000532014 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
TRIM53AP-201ENST00000532014 HDAC5Q9UQL6 1122 aa11.58□□□□□ -0.56
TRIM53AP-201ENST00000532014 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
TRIM53AP-201ENST00000532014 BBOX1O75936 387 aa11.57□□□□□ -0.56
TRIM53AP-201ENST00000532014 ANKRD18AQ8IVF6 992 aa11.57□□□□□ -0.56
TRIM53AP-201ENST00000532014 RPAP2Q8IXW5 612 aaPredicted RBP11.57□□□□□ -0.56
TRIM53AP-201ENST00000532014 CDC5LQ99459 802 aaKnown RBP11.57□□□□□ -0.56
TRIM53AP-201ENST00000532014 SIL1Q9H173 461 aa11.57□□□□□ -0.56
TRIM53AP-201ENST00000532014 CHMP4BQ9H444 224 aaKnown RBP11.57□□□□□ -0.56
TRIM53AP-201ENST00000532014 MINPP1Q9UNW1 487 aa11.57□□□□□ -0.56
TRIM53AP-201ENST00000532014 BCS1LQ9Y276 419 aa11.57□□□□□ -0.56
TRIM53AP-201ENST00000532014 ATP6V0A2Q9Y487 856 aa11.57□□□□□ -0.56
TRIM53AP-201ENST00000532014 COL4A5P29400 1685 aa11.56□□□□□ -0.56
TRIM53AP-201ENST00000532014 SNAP23O00161 211 aa11.56□□□□□ -0.56
TRIM53AP-201ENST00000532014 VGLL2Q8N8G2 317 aa11.56□□□□□ -0.56
TRIM53AP-201ENST00000532014 ARAP2Q8WZ64 1704 aa11.56□□□□□ -0.56
TRIM53AP-201ENST00000532014 NFKBIEO00221 500 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 IGHMBP2P38935 993 aaKnown RBP11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 PRELPP51888 382 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 LHX8Q68G74 356 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 LDHAL6AQ6ZMR3 332 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 SP8Q8IXZ3 490 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 ZNF646O15015 1829 aaPredicted RBP11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 EYA2O00167 538 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 SASH1O94885 1247 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 IGHDP01880 384 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 GPSM2P81274 684 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 CHRNDQ07001 517 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 AAMPQ13685 434 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 MPHOSPH8Q99549 860 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 EXOC6BQ9Y2D4 811 aa11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 NOP58Q9Y2X3 529 aaKnown RBP11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 DICER1Q9UPY3 1922 aaKnown RBP11.55□□□□□ -0.56
TRIM53AP-201ENST00000532014 IRS2Q9Y4H2 1338 aa11.54□□□□□ -0.56
TRIM53AP-201ENST00000532014 CHD4Q14839 1912 aa11.54□□□□□ -0.56
TRIM53AP-201ENST00000532014 TAF5LO75529 589 aa11.54□□□□□ -0.56
TRIM53AP-201ENST00000532014 CIAO1O76071 339 aa11.54□□□□□ -0.56
TRIM53AP-201ENST00000532014 TAF7LQ5H9L4 462 aa11.54□□□□□ -0.56
TRIM53AP-201ENST00000532014 TMC4Q7Z404 712 aa11.54□□□□□ -0.56
TRIM53AP-201ENST00000532014 HELBQ8NG08 1087 aaPredicted RBP11.54□□□□□ -0.56
TRIM53AP-201ENST00000532014 PODXL2Q9NZ53 605 aa11.54□□□□□ -0.56
TRIM53AP-201ENST00000532014 POLLQ9UGP5 575 aa11.54□□□□□ -0.56
TRIM53AP-201ENST00000532014 KLRK1P26718 216 aa11.53□□□□□ -0.56
TRIM53AP-201ENST00000532014 HDAC1Q13547 482 aaPredicted RBP11.53□□□□□ -0.56
TRIM53AP-201ENST00000532014 GPR101Q96P66 508 aaPredicted RBP11.53□□□□□ -0.56
TRIM53AP-201ENST00000532014 CNNM1Q9NRU3 951 aa11.53□□□□□ -0.56
TRIM53AP-201ENST00000532014 SCN9AQ15858 1988 aa11.52□□□□□ -0.56
TRIM53AP-201ENST00000532014 SURF6O75683 361 aaKnown RBP11.52□□□□□ -0.57
TRIM53AP-201ENST00000532014 RASSF7Q02833 373 aa11.52□□□□□ -0.57
TRIM53AP-201ENST00000532014 TBC1D16Q8TBP0 767 aa11.52□□□□□ -0.57
TRIM53AP-201ENST00000532014 RTFDC1Q9BY42 306 aaPredicted RBP11.52□□□□□ -0.57
TRIM53AP-201ENST00000532014 DCTPP1Q9H773 170 aa11.52□□□□□ -0.57
TRIM53AP-201ENST00000532014 FBXO3Q9UK99 471 aa11.52□□□□□ -0.57
TRIM53AP-201ENST00000532014 NSFL1CQ9UNZ2 370 aaKnown RBP11.52□□□□□ -0.57
TRIM53AP-201ENST00000532014 TIAM2Q8IVF5 1701 aa11.52□□□□□ -0.57
TRIM53AP-201ENST00000532014 ZNF609O15014 1411 aa11.51□□□□□ -0.57
TRIM53AP-201ENST00000532014 PDE8BO95263 885 aa11.51□□□□□ -0.57
TRIM53AP-201ENST00000532014 IL15P40933 162 aaPredicted RBP11.51□□□□□ -0.57
TRIM53AP-201ENST00000532014 XDHP47989 1333 aa11.51□□□□□ -0.57
TRIM53AP-201ENST00000532014 TFCP2Q12800 502 aa11.51□□□□□ -0.57
TRIM53AP-201ENST00000532014 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
TRIM53AP-201ENST00000532014 MROH5Q6ZUA9 1318 aa11.51□□□□□ -0.57
TRIM53AP-201ENST00000532014 TXNRD3Q86VQ6 643 aa11.51□□□□□ -0.57
TRIM53AP-201ENST00000532014 PELP1Q8IZL8 1130 aaKnown RBP11.51□□□□□ -0.57
TRIM53AP-201ENST00000532014 PSME4Q14997 1843 aa11.51□□□□□ -0.57
TRIM53AP-201ENST00000532014 HMMRO75330 724 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 FGFR2P21802 821 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 METTL24Q5JXM2 366 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 CC2D2BQ6DHV5 1058 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 DPP8Q6V1X1 898 aaPredicted RBP11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 MPNDQ8N594 471 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 PSMD1Q99460 953 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 ANKIB1Q9P2G1 1089 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 KDM2BQ8NHM5 1336 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 LTBP3Q9NS15 1303 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 GPR162Q16538 588 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 RTKN2Q8IZC4 609 aa11.5□□□□□ -0.57
TRIM53AP-201ENST00000532014 MYH13Q9UKX3 1938 aa11.49□□□□□ -0.57
TRIM53AP-201ENST00000532014 ZNF804BA4D1E1 1349 aa11.49□□□□□ -0.57
TRIM53AP-201ENST00000532014 UFL1O94874 794 aa11.49□□□□□ -0.57
TRIM53AP-201ENST00000532014 NEFLP07196 543 aa11.49□□□□□ -0.57
TRIM53AP-201ENST00000532014 G3BP1Q13283 466 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRIM53AP-201ENST00000532014 SOGA3Q5TF21 947 aa11.49□□□□□ -0.57
TRIM53AP-201ENST00000532014 SMC5Q8IY18 1101 aa11.49□□□□□ -0.57
TRIM53AP-201ENST00000532014 RHPN1Q8TCX5 695 aa11.49□□□□□ -0.57
TRIM53AP-201ENST00000532014 ANKRD2Q9GZV1 360 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms