RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 TBC1D8O95759 1140 aa11.81□□□□□ -0.52
USF1-210ENST00000531842 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
USF1-210ENST00000531842 RASAL3Q86YV0 1011 aa11.81□□□□□ -0.52
USF1-210ENST00000531842 DPF2Q92785 391 aa11.81□□□□□ -0.52
USF1-210ENST00000531842 JARID2Q92833 1246 aaPredicted RBP11.81□□□□□ -0.52
USF1-210ENST00000531842 SEC31BQ9NQW1 1179 aa11.81□□□□□ -0.52
USF1-210ENST00000531842 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
USF1-210ENST00000531842 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
USF1-210ENST00000531842 ERBB4Q15303 1308 aa11.81□□□□□ -0.52
USF1-210ENST00000531842 CENPFP49454 3210 aa11.81□□□□□ -0.52
USF1-210ENST00000531842 ANGEL2Q5VTE6 544 aaKnown RBP11.8□□□□□ -0.52
USF1-210ENST00000531842 CTU1Q7Z7A3 348 aaKnown RBP11.8□□□□□ -0.52
USF1-210ENST00000531842 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
USF1-210ENST00000531842 HTTP42858 3142 aa11.8□□□□□ -0.52
USF1-210ENST00000531842 UBE2Q2LH0YL09 131 aa11.79□□□□□ -0.52
USF1-210ENST00000531842 RIPK4P57078 832 aa11.79□□□□□ -0.52
USF1-210ENST00000531842 TBC1D16Q8TBP0 767 aa11.79□□□□□ -0.52
USF1-210ENST00000531842 CCDC102AQ96A19 550 aa11.79□□□□□ -0.52
USF1-210ENST00000531842 MXD3Q9BW11 206 aa11.79□□□□□ -0.52
USF1-210ENST00000531842 R3HDMLQ9H3Y0 253 aa11.79□□□□□ -0.52
USF1-210ENST00000531842 SAGE1Q9NXZ1 904 aa11.79□□□□□ -0.52
USF1-210ENST00000531842 PAPPA2Q9BXP8 1791 aa11.78□□□□□ -0.52
USF1-210ENST00000531842 NEFMP07197 916 aa11.78□□□□□ -0.52
USF1-210ENST00000531842 SCARF1Q14162 830 aa11.78□□□□□ -0.52
USF1-210ENST00000531842 NEUROD2Q15784 382 aa11.78□□□□□ -0.52
USF1-210ENST00000531842 SULF1Q8IWU6 871 aa11.78□□□□□ -0.52
USF1-210ENST00000531842 ZNF296Q8WUU4 475 aaPredicted RBP11.78□□□□□ -0.52
USF1-210ENST00000531842 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
USF1-210ENST00000531842 FZD1Q9UP38 647 aa11.78□□□□□ -0.52
USF1-210ENST00000531842 LAS1LQ9Y4W2 734 aaKnown RBP11.78□□□□□ -0.52
USF1-210ENST00000531842 MAPK8IP3Q9UPT6 1336 aa11.78□□□□□ -0.52
USF1-210ENST00000531842 VIL1P09327 827 aaKnown RBP11.77□□□□□ -0.53
USF1-210ENST00000531842 HSP90AB3PQ58FF7 597 aa11.77□□□□□ -0.53
USF1-210ENST00000531842 PRPF38BQ5VTL8 546 aaKnown RBP11.77□□□□□ -0.53
USF1-210ENST00000531842 CCDC146Q8IYE0 955 aa11.77□□□□□ -0.53
USF1-210ENST00000531842 ISCA1Q9BUE6 129 aa11.77□□□□□ -0.53
USF1-210ENST00000531842 BRCA2P51587 3418 aa11.77□□□□□ -0.53
USF1-210ENST00000531842 UFL1O94874 794 aa11.76□□□□□ -0.53
USF1-210ENST00000531842 RPS12P25398 132 aaKnown RBP11.76□□□□□ -0.53
USF1-210ENST00000531842 PRKG1Q13976 671 aa11.76□□□□□ -0.53
USF1-210ENST00000531842 SF3B3Q15393 1217 aaKnown RBP11.76□□□□□ -0.53
USF1-210ENST00000531842 IRS4O14654 1257 aaPredicted RBP11.75□□□□□ -0.53
USF1-210ENST00000531842 TMPOP42166 694 aaKnown RBP11.75□□□□□ -0.53
USF1-210ENST00000531842 NBPF9Q3BBW0 867 aa11.75□□□□□ -0.53
USF1-210ENST00000531842 HDAC9Q9UKV0 1011 aa11.75□□□□□ -0.53
USF1-210ENST00000531842 KIAA0100Q14667 2235 aaKnown RBP11.75□□□□□ -0.53
USF1-210ENST00000531842 ZNF280AP59817 542 aaPredicted RBP11.74□□□□□ -0.53
USF1-210ENST00000531842 RPS8P62241 208 aaKnown RBP11.74□□□□□ -0.53
USF1-210ENST00000531842 RSBN1LQ6PCB5 846 aaPredicted RBP11.74□□□□□ -0.53
USF1-210ENST00000531842 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
USF1-210ENST00000531842 TMC4Q7Z404 712 aa11.74□□□□□ -0.53
USF1-210ENST00000531842 PLBD2Q8NHP8 589 aa11.74□□□□□ -0.53
USF1-210ENST00000531842 ZC3H12CQ9C0D7 883 aaKnown RBP11.74□□□□□ -0.53
USF1-210ENST00000531842 ANKIB1Q9P2G1 1089 aa11.74□□□□□ -0.53
USF1-210ENST00000531842 G3V3G9 751 aa11.73□□□□□ -0.53
USF1-210ENST00000531842 MYH3P11055 1940 aa11.73□□□□□ -0.53
USF1-210ENST00000531842 TTLL12Q14166 644 aaPredicted RBP11.73□□□□□ -0.53
USF1-210ENST00000531842 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
USF1-210ENST00000531842 HDGFL1Q5TGJ6 251 aa11.73□□□□□ -0.53
USF1-210ENST00000531842 GMLQ99445 158 aa11.73□□□□□ -0.53
USF1-210ENST00000531842 EYA3Q99504 573 aa11.73□□□□□ -0.53
USF1-210ENST00000531842 PHAXQ9H814 394 aaKnown RBP11.73□□□□□ -0.53
USF1-210ENST00000531842 MYOZ2Q9NPC6 264 aa11.73□□□□□ -0.53
USF1-210ENST00000531842 CEP290O15078 2479 aa11.72□□□□□ -0.53
USF1-210ENST00000531842 GPR25O00155 361 aa11.72□□□□□ -0.53
USF1-210ENST00000531842 CHL1O00533 1208 aa11.72□□□□□ -0.53
USF1-210ENST00000531842 SASH1O94885 1247 aa11.72□□□□□ -0.53
USF1-210ENST00000531842 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
USF1-210ENST00000531842 GGA1Q9UJY5 639 aa11.72□□□□□ -0.53
USF1-210ENST00000531842 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
USF1-210ENST00000531842 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
USF1-210ENST00000531842 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
USF1-210ENST00000531842 PTPN12Q05209 780 aaKnown RBP11.71□□□□□ -0.53
USF1-210ENST00000531842 MYD88Q99836 296 aa11.71□□□□□ -0.53
USF1-210ENST00000531842 PODXL2Q9NZ53 605 aa11.71□□□□□ -0.53
USF1-210ENST00000531842 ZSWIM8A7E2V4 1837 aa11.7□□□□□ -0.54
USF1-210ENST00000531842 ELL2O00472 640 aaPredicted RBP11.7□□□□□ -0.54
USF1-210ENST00000531842 KLRK1P26718 216 aa11.7□□□□□ -0.54
USF1-210ENST00000531842 CAP1Q01518 475 aa11.7□□□□□ -0.54
USF1-210ENST00000531842 TXNRD3Q86VQ6 643 aa11.7□□□□□ -0.54
USF1-210ENST00000531842 PCDHAC2Q9Y5I4 1007 aa11.7□□□□□ -0.54
USF1-210ENST00000531842 DUSP27Q5VZP5 1158 aa11.69□□□□□ -0.54
USF1-210ENST00000531842 AGBL3Q8NEM8 1001 aa11.69□□□□□ -0.54
USF1-210ENST00000531842 SZT2Q5T011 3432 aa11.69□□□□□ -0.54
USF1-210ENST00000531842 USP17L3A6NCW0 530 aa11.68□□□□□ -0.54
USF1-210ENST00000531842 USP17L4A6NCW7 530 aa11.68□□□□□ -0.54
USF1-210ENST00000531842 WNT10BO00744 389 aa11.68□□□□□ -0.54
USF1-210ENST00000531842 TM4SF4P48230 202 aa11.68□□□□□ -0.54
USF1-210ENST00000531842 FBXO46Q6PJ61 603 aaPredicted RBP11.68□□□□□ -0.54
USF1-210ENST00000531842 USP17L1Q7RTZ2 530 aa11.68□□□□□ -0.54
USF1-210ENST00000531842 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
USF1-210ENST00000531842 ZBTB38Q8NAP3 1195 aaPredicted RBP11.68□□□□□ -0.54
USF1-210ENST00000531842 CLMNQ96JQ2 1002 aa11.68□□□□□ -0.54
USF1-210ENST00000531842 DBF4Q9UBU7 674 aaPredicted RBP11.68□□□□□ -0.54
USF1-210ENST00000531842 OTOFQ9HC10 1997 aa11.68□□□□□ -0.54
USF1-210ENST00000531842 ZNF609O15014 1411 aa11.68□□□□□ -0.54
USF1-210ENST00000531842 ECM29Q5VYK3 1845 aa11.67□□□□□ -0.54
USF1-210ENST00000531842 RBBP6Q7Z6E9 1792 aaKnown RBP11.67□□□□□ -0.54
USF1-210ENST00000531842 AOX1Q06278 1338 aa11.67□□□□□ -0.54
USF1-210ENST00000531842 PITPNM2Q9BZ72 1349 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms