RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 FKBP1BP68106 108 aa25.94■■□□□ 1.74
HIPK3-205ENST00000531504 GPSM2P81274 684 aa25.94■■□□□ 1.74
HIPK3-205ENST00000531504 SF3B3Q15393 1217 aaKnown RBP25.94■■□□□ 1.74
HIPK3-205ENST00000531504 RASAL3Q86YV0 1011 aa25.94■■□□□ 1.74
HIPK3-205ENST00000531504 NECTIN2Q92692 538 aa25.94■■□□□ 1.74
HIPK3-205ENST00000531504 HPS5Q9UPZ3 1129 aa25.94■■□□□ 1.74
HIPK3-205ENST00000531504 HDAC9Q9UKV0 1011 aa25.93■■□□□ 1.74
HIPK3-205ENST00000531504 SCN9AQ15858 1988 aa25.93■■□□□ 1.74
HIPK3-205ENST00000531504 G3V3G9 751 aa25.92■■□□□ 1.74
HIPK3-205ENST00000531504 VIL1P09327 827 aaKnown RBP25.92■■□□□ 1.74
HIPK3-205ENST00000531504 DCAF8Q5TAQ9 597 aa25.92■■□□□ 1.74
HIPK3-205ENST00000531504 ZC3H12CQ9C0D7 883 aaKnown RBP25.92■■□□□ 1.74
HIPK3-205ENST00000531504 KCNQ5Q9NR82 932 aa25.92■■□□□ 1.74
HIPK3-205ENST00000531504 ZNF609O15014 1411 aa25.91■■□□□ 1.74
HIPK3-205ENST00000531504 LMOD3Q0VAK6 560 aa25.91■■□□□ 1.74
HIPK3-205ENST00000531504 TBC1D16Q8TBP0 767 aa25.91■■□□□ 1.74
HIPK3-205ENST00000531504 PLBD2Q8NHP8 589 aa25.9■■□□□ 1.74
HIPK3-205ENST00000531504 PSME4Q14997 1843 aa25.89■■□□□ 1.74
HIPK3-205ENST00000531504 RIPK4P57078 832 aa25.89■■□□□ 1.74
HIPK3-205ENST00000531504 ANGEL2Q5VTE6 544 aaKnown RBP25.89■■□□□ 1.74
HIPK3-205ENST00000531504 FAM89AQ96GI7 184 aa25.89■■□□□ 1.74
HIPK3-205ENST00000531504 ASTN2O75129 1339 aaPredicted RBP25.88■■□□□ 1.73
HIPK3-205ENST00000531504 ZNF280AP59817 542 aaPredicted RBP25.88■■□□□ 1.73
HIPK3-205ENST00000531504 AGBL3Q8NEM8 1001 aa25.88■■□□□ 1.73
HIPK3-205ENST00000531504 ZNF428Q96B54 188 aa25.88■■□□□ 1.73
HIPK3-205ENST00000531504 RPS8P62241 208 aaKnown RBP25.87■■□□□ 1.73
HIPK3-205ENST00000531504 SCARF1Q14162 830 aa25.87■■□□□ 1.73
HIPK3-205ENST00000531504 ISCA1Q9BUE6 129 aa25.87■■□□□ 1.73
HIPK3-205ENST00000531504 PITPNM2Q9BZ72 1349 aa25.87■■□□□ 1.73
HIPK3-205ENST00000531504 COL4A1P02462 1669 aa25.87■■□□□ 1.73
HIPK3-205ENST00000531504 ANKRD13DQ6ZTN6 518 aa25.86■■□□□ 1.73
HIPK3-205ENST00000531504 ZNF296Q8WUU4 475 aaPredicted RBP25.86■■□□□ 1.73
HIPK3-205ENST00000531504 PODXL2Q9NZ53 605 aa25.86■■□□□ 1.73
HIPK3-205ENST00000531504 CHPF2Q9P2E5 772 aa25.86■■□□□ 1.73
HIPK3-205ENST00000531504 UFL1O94874 794 aa25.85■■□□□ 1.73
HIPK3-205ENST00000531504 RSBN1LQ6PCB5 846 aaPredicted RBP25.85■■□□□ 1.73
HIPK3-205ENST00000531504 GCC1Q96CN9 775 aa25.85■■□□□ 1.73
HIPK3-205ENST00000531504 ANKIB1Q9P2G1 1089 aa25.85■■□□□ 1.73
HIPK3-205ENST00000531504 IRS4O14654 1257 aaPredicted RBP25.84■■□□□ 1.73
HIPK3-205ENST00000531504 HSP90B1P14625 803 aaKnown RBP25.84■■□□□ 1.73
HIPK3-205ENST00000531504 GGA1Q9UJY5 639 aa25.84■■□□□ 1.73
HIPK3-205ENST00000531504 ATP5J2-PTCD1G3V325 749 aa25.83■■□□□ 1.73
HIPK3-205ENST00000531504 NOM1Q5C9Z4 860 aaKnown RBP25.83■■□□□ 1.73
HIPK3-205ENST00000531504 TBC1D8O95759 1140 aa25.82■■□□□ 1.72
HIPK3-205ENST00000531504 USP17L8P0C7I0 530 aa25.82■■□□□ 1.72
HIPK3-205ENST00000531504 RTL5Q5HYW3 569 aaPredicted RBP25.82■■□□□ 1.72
HIPK3-205ENST00000531504 HDGFL1Q5TGJ6 251 aa25.82■■□□□ 1.72
HIPK3-205ENST00000531504 MYOZ2Q9NPC6 264 aa25.82■■□□□ 1.72
HIPK3-205ENST00000531504 FBXO46Q6PJ61 603 aaPredicted RBP25.81■■□□□ 1.72
HIPK3-205ENST00000531504 DBF4Q9UBU7 674 aaPredicted RBP25.81■■□□□ 1.72
HIPK3-205ENST00000531504 HOXB7P09629 217 aa25.8■■□□□ 1.72
HIPK3-205ENST00000531504 TRIM28Q13263 835 aaKnown RBP25.8■■□□□ 1.72
HIPK3-205ENST00000531504 GPR25O00155 361 aa25.79■■□□□ 1.72
HIPK3-205ENST00000531504 TMPOP42166 694 aaKnown RBP25.79■■□□□ 1.72
HIPK3-205ENST00000531504 TTLL12Q14166 644 aaPredicted RBP25.79■■□□□ 1.72
HIPK3-205ENST00000531504 UBE2Q2LH0YL09 131 aa25.78■■□□□ 1.72
HIPK3-205ENST00000531504 NF2P35240 595 aa25.78■■□□□ 1.72
HIPK3-205ENST00000531504 TM4SF4P48230 202 aa25.78■■□□□ 1.72
HIPK3-205ENST00000531504 SREBF2Q12772 1141 aa25.78■■□□□ 1.72
HIPK3-205ENST00000531504 KRT24Q2M2I5 525 aa25.78■■□□□ 1.72
HIPK3-205ENST00000531504 HYPKQ9NX55 129 aa25.78■■□□□ 1.72
HIPK3-205ENST00000531504 CHL1O00533 1208 aa25.77■■□□□ 1.72
HIPK3-205ENST00000531504 MOB2Q70IA6 237 aa25.77■■□□□ 1.72
HIPK3-205ENST00000531504 GMLQ99445 158 aa25.77■■□□□ 1.72
HIPK3-205ENST00000531504 USP17L3A6NCW0 530 aa25.76■■□□□ 1.71
HIPK3-205ENST00000531504 USP17L4A6NCW7 530 aa25.76■■□□□ 1.71
HIPK3-205ENST00000531504 CCDC152Q4G0S7 254 aa25.76■■□□□ 1.71
HIPK3-205ENST00000531504 USP17L1Q7RTZ2 530 aa25.76■■□□□ 1.71
HIPK3-205ENST00000531504 PODNQ7Z5L7 613 aa25.76■■□□□ 1.71
HIPK3-205ENST00000531504 ZBTB38Q8NAP3 1195 aaPredicted RBP25.76■■□□□ 1.71
HIPK3-205ENST00000531504 SEC31BQ9NQW1 1179 aa25.76■■□□□ 1.71
HIPK3-205ENST00000531504 XDHP47989 1333 aa25.76■■□□□ 1.71
HIPK3-205ENST00000531504 FKTNO75072 461 aa25.75■■□□□ 1.71
HIPK3-205ENST00000531504 LAS1LQ9Y4W2 734 aaKnown RBP25.75■■□□□ 1.71
HIPK3-205ENST00000531504 CFHR5Q9BXR6 569 aa25.74■■□□□ 1.71
HIPK3-205ENST00000531504 OGFOD1Q8N543 542 aa25.73■■□□□ 1.71
HIPK3-205ENST00000531504 ATP2B4P23634 1241 aa25.72■■□□□ 1.71
HIPK3-205ENST00000531504 GOLGA2Q08379 1002 aa25.72■■□□□ 1.71
HIPK3-205ENST00000531504 RIC3Q7Z5B4 369 aa25.72■■□□□ 1.71
HIPK3-205ENST00000531504 NBPF9Q3BBW0 867 aa25.71■■□□□ 1.71
HIPK3-205ENST00000531504 PRAMEF18Q5VWM3 479 aa25.71■■□□□ 1.71
HIPK3-205ENST00000531504 SCAF8Q9UPN6 1271 aaKnown RBP25.71■■□□□ 1.71
HIPK3-205ENST00000531504 MYO3BQ8WXR4 1341 aa25.7■■□□□ 1.71
HIPK3-205ENST00000531504 ALDH1A1P00352 501 aa25.7■■□□□ 1.7
HIPK3-205ENST00000531504 MKRN3Q13064 507 aaKnown RBP25.7■■□□□ 1.7
HIPK3-205ENST00000531504 NEUROD2Q15784 382 aa25.7■■□□□ 1.7
HIPK3-205ENST00000531504 ARMC9Q7Z3E5 817 aa25.7■■□□□ 1.7
HIPK3-205ENST00000531504 ANKRD18AQ8IVF6 992 aa25.7■■□□□ 1.7
HIPK3-205ENST00000531504 PDE8AO60658 829 aa25.69■■□□□ 1.7
HIPK3-205ENST00000531504 MED23Q9ULK4 1368 aa25.69■■□□□ 1.7
HIPK3-205ENST00000531504 MMP14P50281 582 aa25.68■■□□□ 1.7
HIPK3-205ENST00000531504 PCCAP05165 728 aaPredicted RBP25.67■■□□□ 1.7
HIPK3-205ENST00000531504 INTS3Q68E01 1043 aaKnown RBP25.67■■□□□ 1.7
HIPK3-205ENST00000531504 CCDC191Q8NCU4 936 aa25.67■■□□□ 1.7
HIPK3-205ENST00000531504 ZNF646O15015 1829 aaPredicted RBP25.66■■□□□ 1.7
HIPK3-205ENST00000531504 WNT10BO00744 389 aa25.66■■□□□ 1.7
HIPK3-205ENST00000531504 HABP4Q5JVS0 413 aaKnown RBP25.66■■□□□ 1.7
HIPK3-205ENST00000531504 DUSP27Q5VZP5 1158 aa25.66■■□□□ 1.7
HIPK3-205ENST00000531504 CDC5LQ99459 802 aaKnown RBP25.66■■□□□ 1.7
HIPK3-205ENST00000531504 PTPN12Q05209 780 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms