RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 ZNF622Q969S3 477 aaKnown RBP eCLIP8.29□□□□□ -1.083e-7■□□□□ 10.1
CTNND1-229ENST00000531014 NOS1P29475 1434 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 TRIM37O94972 964 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 SATB1Q01826 763 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 TDRD12Q587J7 1177 aaKnown RBP8.29□□□□□ -1.08
CTNND1-229ENST00000531014 KLHL10Q6JEL2 608 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 ZNF530Q6P9A1 599 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-229ENST00000531014 SLC16A10Q8TF71 515 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 CEP170BQ9Y4F5 1589 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-229ENST00000531014 BICDL2A1A5D9 508 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 PTCH1Q13635 1447 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 NEDD9Q14511 834 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 CCDC38Q502W7 563 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 CPLX4Q7Z7G2 160 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 LRRC45Q96CN5 670 aa8.29□□□□□ -1.08
CTNND1-229ENST00000531014 SYCE3A1L190 88 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 EIF6P56537 245 aaKnown RBP8.28□□□□□ -1.08
CTNND1-229ENST00000531014 DBN1Q16643 649 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 IFNL2Q8IZJ0 200 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 MORC4Q8TE76 937 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 C14orf93Q9H972 538 aaKnown RBP8.28□□□□□ -1.08
CTNND1-229ENST00000531014 TRMT1Q9NXH9 659 aaKnown RBP8.28□□□□□ -1.08
CTNND1-229ENST00000531014 SAMD15Q9P1V8 674 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 ARL1P40616 181 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-229ENST00000531014 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.28□□□□□ -1.085e-6■■■□□ 17.3
CTNND1-229ENST00000531014 ALDH3A1P30838 453 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 KIF5AQ12840 1032 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 PRPF4BQ13523 1007 aaKnown RBP8.28□□□□□ -1.08
CTNND1-229ENST00000531014 DACT3Q96B18 629 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-229ENST00000531014 ZSCAN31Q96LW9 406 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-229ENST00000531014 NUP88Q99567 741 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-229ENST00000531014 CEP131Q9UPN4 1083 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 SPATA31D1Q6ZQQ2 1576 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 CCDC129Q6ZRS4 1044 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 ARHGAP27Q6ZUM4 889 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 RAB3IPQ96QF0 476 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-229ENST00000531014 TRIM35Q9UPQ4 493 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 PTPN23Q9H3S7 1636 aa8.28□□□□□ -1.08
CTNND1-229ENST00000531014 DIAPH1O60610 1272 aaKnown RBP8.27□□□□□ -1.09
CTNND1-229ENST00000531014 PDE6BP35913 854 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 TRIM7Q9C029 511 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 FCHSD2O94868 740 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 GBP1P32455 592 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 MAP2K2P36507 400 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 IFI16Q16666 785 aaKnown RBP8.27□□□□□ -1.09
CTNND1-229ENST00000531014 MPRIPQ6WCQ1 1025 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 SUPT20HQ8NEM7 779 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 PLVAPQ9BX97 442 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 ADGBQ8N7X0 1667 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 CCDC69A6NI79 296 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 BUB1BO60566 1050 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-229ENST00000531014 GCKP35557 465 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 PRPF31Q8WWY3 499 aaKnown RBP8.27□□□□□ -1.09
CTNND1-229ENST00000531014 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.27□□□□□ -1.097e-6■□□□□ 8.3
CTNND1-229ENST00000531014 MCM6Q14566 821 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 PHLDB2Q86SQ0 1253 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 POTEDQ86YR6 584 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 ANKRD24Q8TF21 1146 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 VCX3AQ9NNX9 186 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 JADE2Q9NQC1 790 aa8.27□□□□□ -1.09
CTNND1-229ENST00000531014 ARHGAP31Q2M1Z3 1444 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 ERCC6LQ2NKX8 1250 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 NLGN1Q8N2Q7 840 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 CCDC12Q8WUD4 166 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-229ENST00000531014 WASF1Q92558 559 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 PIK3C2GO75747 1445 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 CTAGE15A4D2H0 777 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 KIF20AO95235 890 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 UBTFL1P0CB47 393 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-229ENST00000531014 CTAGE8P0CG41 777 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 R3HDM1Q15032 1099 aaKnown RBP8.26□□□□□ -1.09
CTNND1-229ENST00000531014 CCDC183Q5T5S1 534 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 CTAGE4Q8IX94 777 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 KIAA1524Q8TCG1 905 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 MYCBPQ99417 103 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-229ENST00000531014 RASAL2Q9UJF2 1139 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 PCDH11XQ9BZA7 1347 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 PCDH11YQ9BZA8 1340 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 STK3Q13188 491 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 RBBP5Q15291 538 aaKnown RBP8.26□□□□□ -1.09
CTNND1-229ENST00000531014 INTS8Q75QN2 995 aaKnown RBP8.26□□□□□ -1.09
CTNND1-229ENST00000531014 B4GALNT4Q76KP1 1039 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 ATP2A1O14983 1001 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 RNF8O76064 485 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 GNG11P61952 73 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 CCDC170Q8IYT3 715 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 CCDC63Q8NA47 563 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 CCDC150Q8NCX0 1101 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 PIBF1Q8WXW3 757 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 ACSBG1Q96GR2 724 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 EPSTI1Q96J88 318 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 ORAI2Q96SN7 254 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 TACC3Q9Y6A5 838 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 ARHGEF5Q12774 1597 aa8.26□□□□□ -1.09
CTNND1-229ENST00000531014 GBP5Q96PP8 586 aa8.25□□□□□ -1.09
CTNND1-229ENST00000531014 SPAG5Q96R06 1193 aa8.25□□□□□ -1.09
CTNND1-229ENST00000531014 SELENOSQ9BQE4 189 aa8.25□□□□□ -1.09
CTNND1-229ENST00000531014 ACEP12821 1306 aa8.25□□□□□ -1.09
CTNND1-229ENST00000531014 PFDN1O60925 122 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms