RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 ZC3H12CQ9C0D7 883 aaKnown RBP19.36■□□□□ 0.69
CAPN1-219ENST00000530495 RTL9Q8NET4 1388 aa19.35■□□□□ 0.69
CAPN1-219ENST00000530495 VIL1P09327 827 aaKnown RBP19.35■□□□□ 0.69
CAPN1-219ENST00000530495 HUNKP57058 714 aa19.35■□□□□ 0.69
CAPN1-219ENST00000530495 NOGQ13253 232 aa19.35■□□□□ 0.69
CAPN1-219ENST00000530495 KRT26Q7Z3Y9 468 aa19.35■□□□□ 0.69
CAPN1-219ENST00000530495 PHAXQ9H814 394 aaKnown RBP19.35■□□□□ 0.69
CAPN1-219ENST00000530495 GOLGA2Q08379 1002 aa19.34■□□□□ 0.69
CAPN1-219ENST00000530495 RBM26Q5T8P6 1007 aaKnown RBP19.34■□□□□ 0.69
CAPN1-219ENST00000530495 DCPSQ96C86 337 aaKnown RBP19.34■□□□□ 0.69
CAPN1-219ENST00000530495 IFT57Q9NWB7 429 aa19.34■□□□□ 0.69
CAPN1-219ENST00000530495 CASP8AP2Q9UKL3 1982 aa19.33■□□□□ 0.69
CAPN1-219ENST00000530495 CCDC85CA6NKD9 419 aa19.33■□□□□ 0.68
CAPN1-219ENST00000530495 GNAI1P63096 354 aa19.33■□□□□ 0.68
CAPN1-219ENST00000530495 CCDC191Q8NCU4 936 aa19.33■□□□□ 0.68
CAPN1-219ENST00000530495 SEC31BQ9NQW1 1179 aa19.33■□□□□ 0.68
CAPN1-219ENST00000530495 SCN9AQ15858 1988 aa19.33■□□□□ 0.68
CAPN1-219ENST00000530495 ELL2O00472 640 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-219ENST00000530495 PCCAP05165 728 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-219ENST00000530495 RGS19P49795 217 aa19.32■□□□□ 0.68
CAPN1-219ENST00000530495 CALD1Q05682 793 aaKnown RBP19.32■□□□□ 0.68
CAPN1-219ENST00000530495 RGMBQ6NW40 437 aa19.32■□□□□ 0.68
CAPN1-219ENST00000530495 C2orf69Q8N8R5 385 aa19.32■□□□□ 0.68
CAPN1-219ENST00000530495 ZIC5Q96T25 663 aa19.32■□□□□ 0.68
CAPN1-219ENST00000530495 MYD88Q99836 296 aa19.32■□□□□ 0.68
CAPN1-219ENST00000530495 GBA2Q9HCG7 927 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-219ENST00000530495 ANKIB1Q9P2G1 1089 aa19.32■□□□□ 0.68
CAPN1-219ENST00000530495 FAM155AB1AL88 458 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-219ENST00000530495 APAF1O14727 1248 aa19.31■□□□□ 0.68
CAPN1-219ENST00000530495 PDE8AO60658 829 aa19.31■□□□□ 0.68
CAPN1-219ENST00000530495 CCDC152Q4G0S7 254 aa19.31■□□□□ 0.68
CAPN1-219ENST00000530495 PRKRIP1Q9H875 184 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-219ENST00000530495 ADM5C9JUS6 153 aa19.3■□□□□ 0.68
CAPN1-219ENST00000530495 G3V3G9 751 aa19.3■□□□□ 0.68
CAPN1-219ENST00000530495 UFL1O94874 794 aa19.3■□□□□ 0.68
CAPN1-219ENST00000530495 KIF4BQ2VIQ3 1234 aa19.3■□□□□ 0.68
CAPN1-219ENST00000530495 FAM161AQ3B820 660 aa19.3■□□□□ 0.68
CAPN1-219ENST00000530495 DCAF8Q5TAQ9 597 aa19.3■□□□□ 0.68
CAPN1-219ENST00000530495 C8orf58Q8NAV2 365 aa19.3■□□□□ 0.68
CAPN1-219ENST00000530495 CCDC102AQ96A19 550 aa19.3■□□□□ 0.68
CAPN1-219ENST00000530495 MCOLN1Q9GZU1 580 aa19.3■□□□□ 0.68
CAPN1-219ENST00000530495 GGA1Q9UJY5 639 aa19.3■□□□□ 0.68
CAPN1-219ENST00000530495 METTL22Q9BUU2 404 aaPredicted RBP19.29■□□□□ 0.68
CAPN1-219ENST00000530495 CHMP4AQ9BY43 222 aa19.29■□□□□ 0.68
CAPN1-219ENST00000530495 CWC25Q9NXE8 425 aaPredicted RBP19.29■□□□□ 0.68
CAPN1-219ENST00000530495 ZNF609O15014 1411 aa19.28■□□□□ 0.68
CAPN1-219ENST00000530495 ZNF280AP59817 542 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-219ENST00000530495 SULF1Q8IWU6 871 aa19.28■□□□□ 0.68
CAPN1-219ENST00000530495 AGBL3Q8NEM8 1001 aa19.28■□□□□ 0.68
CAPN1-219ENST00000530495 JARID2Q92833 1246 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-219ENST00000530495 PSME4Q14997 1843 aa19.28■□□□□ 0.68
CAPN1-219ENST00000530495 DDX58O95786 925 aaKnown RBP19.27■□□□□ 0.68
CAPN1-219ENST00000530495 ZNF157P51786 506 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-219ENST00000530495 MLLT1Q03111 559 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-219ENST00000530495 CCDC30Q5VVM6 783 aa19.27■□□□□ 0.68
CAPN1-219ENST00000530495 RSBN1LQ6PCB5 846 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-219ENST00000530495 GGA3Q9NZ52 723 aa19.27■□□□□ 0.68
CAPN1-219ENST00000530495 KIF23Q02241 960 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-219ENST00000530495 DGKZQ13574 1117 aa19.26■□□□□ 0.67
CAPN1-219ENST00000530495 ANKRD18AQ8IVF6 992 aa19.26■□□□□ 0.67
CAPN1-219ENST00000530495 GMLQ99445 158 aa19.26■□□□□ 0.67
CAPN1-219ENST00000530495 SAGE1Q9NXZ1 904 aa19.26■□□□□ 0.67
CAPN1-219ENST00000530495 ASTN2O75129 1339 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-219ENST00000530495 XDHP47989 1333 aa19.25■□□□□ 0.67
CAPN1-219ENST00000530495 ATP2B4P23634 1241 aa19.25■□□□□ 0.67
CAPN1-219ENST00000530495 SCARF1Q14162 830 aa19.25■□□□□ 0.67
CAPN1-219ENST00000530495 PODNQ7Z5L7 613 aa19.25■□□□□ 0.67
CAPN1-219ENST00000530495 CDCA5Q96FF9 252 aa19.25■□□□□ 0.67
CAPN1-219ENST00000530495 CCDC85AQ96PX6 553 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-219ENST00000530495 MAP3K2Q9Y2U5 619 aa19.25■□□□□ 0.67
CAPN1-219ENST00000530495 ANGEL2Q5VTE6 544 aaKnown RBP19.24■□□□□ 0.67
CAPN1-219ENST00000530495 KSR2Q6VAB6 950 aa19.24■□□□□ 0.67
CAPN1-219ENST00000530495 AKAP11Q9UKA4 1901 aa19.23■□□□□ 0.67
CAPN1-219ENST00000530495 USP17L3A6NCW0 530 aa19.23■□□□□ 0.67
CAPN1-219ENST00000530495 USP17L4A6NCW7 530 aa19.23■□□□□ 0.67
CAPN1-219ENST00000530495 SLC10A3P09131 477 aa19.23■□□□□ 0.67
CAPN1-219ENST00000530495 USP17L8P0C7I0 530 aa19.23■□□□□ 0.67
CAPN1-219ENST00000530495 USP17L1Q7RTZ2 530 aa19.23■□□□□ 0.67
CAPN1-219ENST00000530495 TSPYL6Q8N831 410 aa19.23■□□□□ 0.67
CAPN1-219ENST00000530495 TTLL11Q8NHH1 800 aa19.23■□□□□ 0.67
CAPN1-219ENST00000530495 RNF186Q9NXI6 227 aa19.23■□□□□ 0.67
CAPN1-219ENST00000530495 PI4KAP2A4QPH2 592 aa19.22■□□□□ 0.67
CAPN1-219ENST00000530495 IGKV5-2P06315 115 aa19.22■□□□□ 0.67
CAPN1-219ENST00000530495 CTSWP56202 376 aa19.22■□□□□ 0.67
CAPN1-219ENST00000530495 PI4KAP1Q8N8J0 262 aa19.22■□□□□ 0.67
CAPN1-219ENST00000530495 CSRNP1Q96S65 589 aa19.22■□□□□ 0.67
CAPN1-219ENST00000530495 CDC5LQ99459 802 aaKnown RBP19.22■□□□□ 0.67
CAPN1-219ENST00000530495 MYOZ2Q9NPC6 264 aa19.22■□□□□ 0.67
CAPN1-219ENST00000530495 BSDC1Q9NW68 430 aaPredicted RBP19.22■□□□□ 0.67
CAPN1-219ENST00000530495 PITPNM2Q9BZ72 1349 aa19.22■□□□□ 0.67
CAPN1-219ENST00000530495 WTIPA6NIX2 430 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-219ENST00000530495 TRPA1O75762 1119 aa19.21■□□□□ 0.67
CAPN1-219ENST00000530495 FKBP1BP68106 108 aa19.21■□□□□ 0.67
CAPN1-219ENST00000530495 REM2Q8IYK8 340 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-219ENST00000530495 MINPP1Q9UNW1 487 aa19.21■□□□□ 0.67
CAPN1-219ENST00000530495 MYH3P11055 1940 aa19.21■□□□□ 0.67
CAPN1-219ENST00000530495 NEXNQ0ZGT2 675 aa19.19■□□□□ 0.66
CAPN1-219ENST00000530495 GREM2Q9H772 168 aa19.19■□□□□ 0.66
CAPN1-219ENST00000530495 MED23Q9ULK4 1368 aa19.19■□□□□ 0.66
CAPN1-219ENST00000530495 H7C1W4 665 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms