RNA–Protein interactions for RNA: ENST00000530405.5

PACSIN3-206, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-206ENST00000530405 DOK7Q18PE1 504 aa21.4■■□□□ 1.02
PACSIN3-206ENST00000530405 CDCA5Q96FF9 252 aa21.4■■□□□ 1.02
PACSIN3-206ENST00000530405 SCN9AQ15858 1988 aa21.39■■□□□ 1.02
PACSIN3-206ENST00000530405 RIPK4P57078 832 aa21.39■■□□□ 1.01
PACSIN3-206ENST00000530405 TBC1D16Q8TBP0 767 aa21.39■■□□□ 1.01
PACSIN3-206ENST00000530405 ZNF609O15014 1411 aa21.38■■□□□ 1.01
PACSIN3-206ENST00000530405 FKBP1BP68106 108 aa21.38■■□□□ 1.01
PACSIN3-206ENST00000530405 PKN2Q16513 984 aaKnown RBP21.38■■□□□ 1.01
PACSIN3-206ENST00000530405 RASAL3Q86YV0 1011 aa21.38■■□□□ 1.01
PACSIN3-206ENST00000530405 PLBD2Q8NHP8 589 aa21.38■■□□□ 1.01
PACSIN3-206ENST00000530405 FAM89AQ96GI7 184 aa21.38■■□□□ 1.01
PACSIN3-206ENST00000530405 ISCA1Q9BUE6 129 aa21.38■■□□□ 1.01
PACSIN3-206ENST00000530405 ZC3H12CQ9C0D7 883 aaKnown RBP21.38■■□□□ 1.01
PACSIN3-206ENST00000530405 COL4A1P02462 1669 aa21.37■■□□□ 1.01
PACSIN3-206ENST00000530405 ASTN2O75129 1339 aaPredicted RBP21.37■■□□□ 1.01
PACSIN3-206ENST00000530405 PODXL2Q9NZ53 605 aa21.37■■□□□ 1.01
PACSIN3-206ENST00000530405 HPS5Q9UPZ3 1129 aa21.37■■□□□ 1.01
PACSIN3-206ENST00000530405 PAPPA2Q9BXP8 1791 aa21.36■■□□□ 1.01
PACSIN3-206ENST00000530405 ZNF280AP59817 542 aaPredicted RBP21.36■■□□□ 1.01
PACSIN3-206ENST00000530405 RPS8P62241 208 aaKnown RBP21.36■■□□□ 1.01
PACSIN3-206ENST00000530405 LMOD3Q0VAK6 560 aa21.36■■□□□ 1.01
PACSIN3-206ENST00000530405 ANKRD13DQ6ZTN6 518 aa21.36■■□□□ 1.01
PACSIN3-206ENST00000530405 ZNF428Q96B54 188 aa21.36■■□□□ 1.01
PACSIN3-206ENST00000530405 ANGEL2Q5VTE6 544 aaKnown RBP21.35■■□□□ 1.01
PACSIN3-206ENST00000530405 AGBL3Q8NEM8 1001 aa21.35■■□□□ 1.01
PACSIN3-206ENST00000530405 CHPF2Q9P2E5 772 aa21.35■■□□□ 1.01
PACSIN3-206ENST00000530405 SCARF1Q14162 830 aa21.34■■□□□ 1.01
PACSIN3-206ENST00000530405 PITPNM2Q9BZ72 1349 aa21.33■■□□□ 1.01
PACSIN3-206ENST00000530405 ATP5J2-PTCD1G3V325 749 aa21.33■■□□□ 1.01
PACSIN3-206ENST00000530405 G3V3G9 751 aa21.33■■□□□ 1.01
PACSIN3-206ENST00000530405 TMPOP42166 694 aaKnown RBP21.33■■□□□ 1.01
PACSIN3-206ENST00000530405 TRIM28Q13263 835 aaKnown RBP21.33■■□□□ 1.01
PACSIN3-206ENST00000530405 DCAF8Q5TAQ9 597 aa21.33■■□□□ 1.01
PACSIN3-206ENST00000530405 RSBN1LQ6PCB5 846 aaPredicted RBP21.33■■□□□ 1.01
PACSIN3-206ENST00000530405 PSME4Q14997 1843 aa21.33■■□□□ 1.01
PACSIN3-206ENST00000530405 CHL1O00533 1208 aa21.32■■□□□ 1
PACSIN3-206ENST00000530405 IRS4O14654 1257 aaPredicted RBP21.32■■□□□ 1
PACSIN3-206ENST00000530405 KRT24Q2M2I5 525 aa21.32■■□□□ 1
PACSIN3-206ENST00000530405 HDAC9Q9UKV0 1011 aa21.32■■□□□ 1
PACSIN3-206ENST00000530405 UFL1O94874 794 aa21.31■■□□□ 1
PACSIN3-206ENST00000530405 HOXB7P09629 217 aa21.31■■□□□ 1
PACSIN3-206ENST00000530405 NOM1Q5C9Z4 860 aaKnown RBP21.31■■□□□ 1
PACSIN3-206ENST00000530405 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
PACSIN3-206ENST00000530405 HDGFL1Q5TGJ6 251 aa21.31■■□□□ 1
PACSIN3-206ENST00000530405 ZNF296Q8WUU4 475 aaPredicted RBP21.31■■□□□ 1
PACSIN3-206ENST00000530405 DBF4Q9UBU7 674 aaPredicted RBP21.31■■□□□ 1
PACSIN3-206ENST00000530405 GMLQ99445 158 aa21.3■■□□□ 1
PACSIN3-206ENST00000530405 MYOZ2Q9NPC6 264 aa21.3■■□□□ 1
PACSIN3-206ENST00000530405 ANKIB1Q9P2G1 1089 aa21.3■■□□□ 1
PACSIN3-206ENST00000530405 GGA1Q9UJY5 639 aa21.3■■□□□ 1
PACSIN3-206ENST00000530405 USP17L8P0C7I0 530 aa21.29■■□□□ 1
PACSIN3-206ENST00000530405 HSP90B1P14625 803 aaKnown RBP21.29■■□□□ 1
PACSIN3-206ENST00000530405 TBC1D8O95759 1140 aa21.28■■□□□ 1
PACSIN3-206ENST00000530405 TM4SF4P48230 202 aa21.28■■□□□ 1
PACSIN3-206ENST00000530405 HYPKQ9NX55 129 aa21.28■■□□□ 1
PACSIN3-206ENST00000530405 FBXO46Q6PJ61 603 aaPredicted RBP21.27■■□□□ 1
PACSIN3-206ENST00000530405 MOB2Q70IA6 237 aa21.27■■□□□ 1
PACSIN3-206ENST00000530405 ZBTB38Q8NAP3 1195 aaPredicted RBP21.27■■□□□ 1
PACSIN3-206ENST00000530405 SEC31BQ9NQW1 1179 aa21.27■■□□□ 1
PACSIN3-206ENST00000530405 UBE2Q2LH0YL09 131 aa21.26■□□□□ 0.99
PACSIN3-206ENST00000530405 GPR25O00155 361 aa21.26■□□□□ 0.99
PACSIN3-206ENST00000530405 PODNQ7Z5L7 613 aa21.26■□□□□ 0.99
PACSIN3-206ENST00000530405 USP17L3A6NCW0 530 aa21.25■□□□□ 0.99
PACSIN3-206ENST00000530405 USP17L4A6NCW7 530 aa21.25■□□□□ 0.99
PACSIN3-206ENST00000530405 USP17L1Q7RTZ2 530 aa21.25■□□□□ 0.99
PACSIN3-206ENST00000530405 CCDC152Q4G0S7 254 aa21.24■□□□□ 0.99
PACSIN3-206ENST00000530405 GCC1Q96CN9 775 aa21.24■□□□□ 0.99
PACSIN3-206ENST00000530405 CFHR5Q9BXR6 569 aa21.24■□□□□ 0.99
PACSIN3-206ENST00000530405 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
PACSIN3-206ENST00000530405 XDHP47989 1333 aa21.24■□□□□ 0.99
PACSIN3-206ENST00000530405 ATP2B4P23634 1241 aa21.22■□□□□ 0.99
PACSIN3-206ENST00000530405 SREBF2Q12772 1141 aa21.22■□□□□ 0.99
PACSIN3-206ENST00000530405 NEUROD2Q15784 382 aa21.22■□□□□ 0.99
PACSIN3-206ENST00000530405 SCAF8Q9UPN6 1271 aaKnown RBP21.22■□□□□ 0.99
PACSIN3-206ENST00000530405 PDE8AO60658 829 aa21.21■□□□□ 0.99
PACSIN3-206ENST00000530405 FKTNO75072 461 aa21.21■□□□□ 0.99
PACSIN3-206ENST00000530405 NF2P35240 595 aa21.21■□□□□ 0.99
PACSIN3-206ENST00000530405 TTLL12Q14166 644 aaPredicted RBP21.21■□□□□ 0.99
PACSIN3-206ENST00000530405 NBPF9Q3BBW0 867 aa21.21■□□□□ 0.99
PACSIN3-206ENST00000530405 PRAMEF18Q5VWM3 479 aa21.21■□□□□ 0.99
PACSIN3-206ENST00000530405 RIC3Q7Z5B4 369 aa21.21■□□□□ 0.99
PACSIN3-206ENST00000530405 TRIM35Q9UPQ4 493 aa21.21■□□□□ 0.99
PACSIN3-206ENST00000530405 PCCAP05165 728 aaPredicted RBP21.2■□□□□ 0.98
PACSIN3-206ENST00000530405 GOLGA2Q08379 1002 aa21.2■□□□□ 0.98
PACSIN3-206ENST00000530405 DUSP27Q5VZP5 1158 aa21.2■□□□□ 0.98
PACSIN3-206ENST00000530405 ANKRD18AQ8IVF6 992 aa21.2■□□□□ 0.98
PACSIN3-206ENST00000530405 CCDC191Q8NCU4 936 aa21.2■□□□□ 0.98
PACSIN3-206ENST00000530405 OGFOD1Q8N543 542 aa21.19■□□□□ 0.98
PACSIN3-206ENST00000530405 WNT10BO00744 389 aa21.18■□□□□ 0.98
PACSIN3-206ENST00000530405 MMP14P50281 582 aa21.18■□□□□ 0.98
PACSIN3-206ENST00000530405 DACT2Q5SW24 774 aa21.18■□□□□ 0.98
PACSIN3-206ENST00000530405 MYO3BQ8WXR4 1341 aa21.18■□□□□ 0.98
PACSIN3-206ENST00000530405 HTTP42858 3142 aa21.18■□□□□ 0.98
PACSIN3-206ENST00000530405 MED23Q9ULK4 1368 aa21.18■□□□□ 0.98
PACSIN3-206ENST00000530405 ZNF646O15015 1829 aaPredicted RBP21.18■□□□□ 0.98
PACSIN3-206ENST00000530405 MKI67P46013 3256 aaKnown RBP21.17■□□□□ 0.98
PACSIN3-206ENST00000530405 MKRN3Q13064 507 aaKnown RBP21.17■□□□□ 0.98
PACSIN3-206ENST00000530405 CCDC146Q8IYE0 955 aa21.17■□□□□ 0.98
PACSIN3-206ENST00000530405 MYD88Q99836 296 aa21.17■□□□□ 0.98
PACSIN3-206ENST00000530405 ALDH1A1P00352 501 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms