RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CLTCL1P53675 1640 aa12.88□□□□□ -0.35
CCDC90B-217ENST00000530253 EFSO43281 561 aa12.88□□□□□ -0.35
CCDC90B-217ENST00000530253 ALAS2P22557 587 aa12.88□□□□□ -0.35
CCDC90B-217ENST00000530253 USP3Q9Y6I4 520 aa12.88□□□□□ -0.35
CCDC90B-217ENST00000530253 DHX57Q6P158 1386 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-217ENST00000530253 PIK3CDO00329 1044 aa12.87□□□□□ -0.35
CCDC90B-217ENST00000530253 PCBP4P57723 403 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-217ENST00000530253 TEAD4Q15561 434 aa12.87□□□□□ -0.35
CCDC90B-217ENST00000530253 NEUROD4Q9HD90 331 aa12.87□□□□□ -0.35
CCDC90B-217ENST00000530253 ADGRB3O60242 1522 aa12.87□□□□□ -0.35
CCDC90B-217ENST00000530253 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-217ENST00000530253 CFAP65Q6ZU64 1925 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-217ENST00000530253 UBR1Q8IWV7 1749 aa12.86□□□□□ -0.35
CCDC90B-217ENST00000530253 SPATA31C1P0DKV0 1188 aa12.86□□□□□ -0.35
CCDC90B-217ENST00000530253 ZNF358Q9NW07 568 aa12.86□□□□□ -0.35
CCDC90B-217ENST00000530253 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
CCDC90B-217ENST00000530253 ANKRD30BQ9BXX2 1392 aa12.85□□□□□ -0.35
CCDC90B-217ENST00000530253 ELOA3CA0A087WX78 387 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-217ENST00000530253 ELOA3DA6NLF2 546 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-217ENST00000530253 ELOA3BQ3SY89 546 aa12.85□□□□□ -0.35
CCDC90B-217ENST00000530253 TRIM50Q86XT4 487 aa12.85□□□□□ -0.35
CCDC90B-217ENST00000530253 ELOA3Q8NG57 546 aa12.85□□□□□ -0.35
CCDC90B-217ENST00000530253 L3MBTL2Q969R5 705 aa12.85□□□□□ -0.35
CCDC90B-217ENST00000530253 TMEM131LA2VDJ0 1609 aa12.84□□□□□ -0.35
CCDC90B-217ENST00000530253 CHRNA4P43681 627 aa12.84□□□□□ -0.35
CCDC90B-217ENST00000530253 NCOA4Q13772 614 aa12.84□□□□□ -0.35
CCDC90B-217ENST00000530253 IDI1Q13907 227 aa12.84□□□□□ -0.35
CCDC90B-217ENST00000530253 ALG2Q9H553 416 aa12.84□□□□□ -0.35
CCDC90B-217ENST00000530253 SLC52A1Q9NWF4 448 aa12.84□□□□□ -0.35
CCDC90B-217ENST00000530253 HCN2Q9UL51 889 aa12.84□□□□□ -0.35
CCDC90B-217ENST00000530253 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
CCDC90B-217ENST00000530253 NOS2P35228 1153 aa12.83□□□□□ -0.36
CCDC90B-217ENST00000530253 TXLNAP40222 546 aa12.83□□□□□ -0.36
CCDC90B-217ENST00000530253 ZNF232Q9UNY5 417 aa12.83□□□□□ -0.36
CCDC90B-217ENST00000530253 NEUROD1Q13562 356 aa12.82□□□□□ -0.36
CCDC90B-217ENST00000530253 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC90B-217ENST00000530253 PLVAPQ9BX97 442 aa12.82□□□□□ -0.36
CCDC90B-217ENST00000530253 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
CCDC90B-217ENST00000530253 ARHGAP23Q9P227 1491 aa12.82□□□□□ -0.36
CCDC90B-217ENST00000530253 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
CCDC90B-217ENST00000530253 EML1O00423 815 aa12.81□□□□□ -0.36
CCDC90B-217ENST00000530253 SIN3BO75182 1162 aa12.81□□□□□ -0.36
CCDC90B-217ENST00000530253 SYT9Q86SS6 491 aa12.81□□□□□ -0.36
CCDC90B-217ENST00000530253 SLC9A9Q8IVB4 645 aa12.81□□□□□ -0.36
CCDC90B-217ENST00000530253 ZDHHC1Q8WTX9 485 aa12.81□□□□□ -0.36
CCDC90B-217ENST00000530253 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
CCDC90B-217ENST00000530253 SLIT1O75093 1534 aa12.81□□□□□ -0.36
CCDC90B-217ENST00000530253 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
CCDC90B-217ENST00000530253 CCDC144AA2RUR9 1427 aa12.8□□□□□ -0.36
CCDC90B-217ENST00000530253 SPATA31E1Q6ZUB1 1445 aa12.8□□□□□ -0.36
CCDC90B-217ENST00000530253 SERTM1A2A2V5 107 aa12.8□□□□□ -0.36
CCDC90B-217ENST00000530253 ATP1A2P50993 1020 aa12.8□□□□□ -0.36
CCDC90B-217ENST00000530253 PRRT3Q5FWE3 981 aa12.8□□□□□ -0.36
CCDC90B-217ENST00000530253 TRIM11Q96F44 468 aa12.8□□□□□ -0.36
CCDC90B-217ENST00000530253 RAD21O60216 631 aa12.79□□□□□ -0.36
CCDC90B-217ENST00000530253 EPHA4P54764 986 aa12.79□□□□□ -0.36
CCDC90B-217ENST00000530253 LRRC69Q6ZNQ3 347 aa12.79□□□□□ -0.36
CCDC90B-217ENST00000530253 ZFYVE9O95405 1425 aa12.79□□□□□ -0.36
CCDC90B-217ENST00000530253 MYO5BQ9ULV0 1848 aa12.78□□□□□ -0.36
CCDC90B-217ENST00000530253 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
CCDC90B-217ENST00000530253 GATA4P43694 442 aa12.78□□□□□ -0.36
CCDC90B-217ENST00000530253 TMEM2Q9UHN6 1383 aa12.78□□□□□ -0.36
CCDC90B-217ENST00000530253 Q8N3U1 123 aa12.77□□□□□ -0.37
CCDC90B-217ENST00000530253 RHPN1Q8TCX5 695 aa12.77□□□□□ -0.37
CCDC90B-217ENST00000530253 FBXO41Q8TF61 875 aa12.77□□□□□ -0.37
CCDC90B-217ENST00000530253 NEXMIFQ5QGS0 1516 aa12.77□□□□□ -0.37
CCDC90B-217ENST00000530253 KIF1BO60333 1816 aa12.76□□□□□ -0.37
CCDC90B-217ENST00000530253 PSMA6P60900 246 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-217ENST00000530253 ANKIB1Q9P2G1 1089 aa12.76□□□□□ -0.37
CCDC90B-217ENST00000530253 C1orf53Q5VUE5 145 aa12.75□□□□□ -0.37
CCDC90B-217ENST00000530253 PLEKHM2Q8IWE5 1019 aa12.75□□□□□ -0.37
CCDC90B-217ENST00000530253 THEMISQ8N1K5 641 aaPredicted RBP12.75□□□□□ -0.37
CCDC90B-217ENST00000530253 TNFRSF25Q93038 417 aa12.75□□□□□ -0.37
CCDC90B-217ENST00000530253 MDFIQ99750 246 aa12.75□□□□□ -0.37
CCDC90B-217ENST00000530253 POLR1AO95602 1720 aaPredicted RBP12.74□□□□□ -0.37
CCDC90B-217ENST00000530253 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
CCDC90B-217ENST00000530253 RIMS2Q9UQ26 1411 aa12.74□□□□□ -0.37
CCDC90B-217ENST00000530253 APBA3O96018 575 aa12.74□□□□□ -0.37
CCDC90B-217ENST00000530253 TNS4Q8IZW8 715 aa12.74□□□□□ -0.37
CCDC90B-217ENST00000530253 DEPDC4Q8N2C3 294 aa12.74□□□□□ -0.37
CCDC90B-217ENST00000530253 PRDM6Q9NQX0 595 aa12.74□□□□□ -0.37
CCDC90B-217ENST00000530253 MED14O60244 1454 aa12.73□□□□□ -0.37
CCDC90B-217ENST00000530253 SCAF11Q99590 1463 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-217ENST00000530253 HIRAP54198 1017 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-217ENST00000530253 TPCN2Q8NHX9 752 aa12.73□□□□□ -0.37
CCDC90B-217ENST00000530253 LTKP29376 864 aa12.72□□□□□ -0.37
CCDC90B-217ENST00000530253 DOC2BQ14184 412 aa12.72□□□□□ -0.37
CCDC90B-217ENST00000530253 NACC1Q96RE7 527 aa12.72□□□□□ -0.37
CCDC90B-217ENST00000530253 PPLO60437 1756 aa12.71□□□□□ -0.37
CCDC90B-217ENST00000530253 ZNF335Q9H4Z2 1342 aaPredicted RBP12.71□□□□□ -0.37
CCDC90B-217ENST00000530253 LTBP4Q8N2S1 1624 aa12.71□□□□□ -0.37
CCDC90B-217ENST00000530253 M0R2N6 131 aa12.71□□□□□ -0.37
CCDC90B-217ENST00000530253 SPEM2Q0P670 501 aa12.71□□□□□ -0.37
CCDC90B-217ENST00000530253 TBCELQ5QJ74 424 aa12.71□□□□□ -0.37
CCDC90B-217ENST00000530253 SEMA6BQ9H3T3 888 aa12.71□□□□□ -0.37
CCDC90B-217ENST00000530253 RBM19Q9Y4C8 960 aaKnown RBP12.71□□□□□ -0.37
CCDC90B-217ENST00000530253 M0R082 166 aa12.7□□□□□ -0.38
CCDC90B-217ENST00000530253 CCDC102BQ68D86 513 aa12.7□□□□□ -0.38
CCDC90B-217ENST00000530253 ZNF417Q8TAU3 575 aa12.7□□□□□ -0.38
CCDC90B-217ENST00000530253 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms