RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 DALRD3Q5D0E6 543 aaKnown RBP16.9■□□□□ 0.3
SMCO4-205ENST00000529714 CC2D2BQ6DHV5 1058 aa16.9■□□□□ 0.3
SMCO4-205ENST00000529714 ATG9AQ7Z3C6 839 aa16.9■□□□□ 0.3
SMCO4-205ENST00000529714 ERC1Q8IUD2 1116 aa16.9■□□□□ 0.3
SMCO4-205ENST00000529714 SP8Q8IXZ3 490 aa16.9■□□□□ 0.3
SMCO4-205ENST00000529714 CCDC136Q96JN2 1154 aa16.9■□□□□ 0.3
SMCO4-205ENST00000529714 SIL1Q9H173 461 aa16.9■□□□□ 0.3
SMCO4-205ENST00000529714 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
SMCO4-205ENST00000529714 IGHDP01880 384 aa16.89■□□□□ 0.29
SMCO4-205ENST00000529714 GRIPAP1Q4V328 841 aa16.89■□□□□ 0.29
SMCO4-205ENST00000529714 LRRC24Q50LG9 513 aa16.89■□□□□ 0.29
SMCO4-205ENST00000529714 SMC5Q8IY18 1101 aa16.89■□□□□ 0.29
SMCO4-205ENST00000529714 PUS3Q9BZE2 481 aaKnown RBP16.89■□□□□ 0.29
SMCO4-205ENST00000529714 EXOC6BQ9Y2D4 811 aa16.89■□□□□ 0.29
SMCO4-205ENST00000529714 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
SMCO4-205ENST00000529714 OS9Q13438 667 aaPredicted RBP16.88■□□□□ 0.29
SMCO4-205ENST00000529714 SOGA3Q5TF21 947 aa16.88■□□□□ 0.29
SMCO4-205ENST00000529714 C7orf43Q8WVR3 580 aa16.88■□□□□ 0.29
SMCO4-205ENST00000529714 ANKRD2Q9GZV1 360 aa16.88■□□□□ 0.29
SMCO4-205ENST00000529714 TMX4Q9H1E5 349 aaPredicted RBP16.88■□□□□ 0.29
SMCO4-205ENST00000529714 MINPP1Q9UNW1 487 aa16.88■□□□□ 0.29
SMCO4-205ENST00000529714 LTBP1Q14766 1721 aa16.87■□□□□ 0.29
SMCO4-205ENST00000529714 CHRNDQ07001 517 aa16.87■□□□□ 0.29
SMCO4-205ENST00000529714 CENPQQ7L2Z9 268 aaPredicted RBP16.87■□□□□ 0.29
SMCO4-205ENST00000529714 KIF1BPQ96EK5 621 aa16.87■□□□□ 0.29
SMCO4-205ENST00000529714 KDM2BQ8NHM5 1336 aa16.87■□□□□ 0.29
SMCO4-205ENST00000529714 SRCAPQ6ZRS2 3230 aa16.87■□□□□ 0.29
SMCO4-205ENST00000529714 SASH1O94885 1247 aa16.86■□□□□ 0.29
SMCO4-205ENST00000529714 METTL24Q5JXM2 366 aa16.86■□□□□ 0.29
SMCO4-205ENST00000529714 VGLL2Q8N8G2 317 aa16.86■□□□□ 0.29
SMCO4-205ENST00000529714 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
SMCO4-205ENST00000529714 CEP126Q9P2H0 1117 aa16.86■□□□□ 0.29
SMCO4-205ENST00000529714 XDHP47989 1333 aa16.86■□□□□ 0.29
SMCO4-205ENST00000529714 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
SMCO4-205ENST00000529714 PDE8BO95263 885 aa16.85■□□□□ 0.29
SMCO4-205ENST00000529714 RHPN1Q8TCX5 695 aa16.85■□□□□ 0.29
SMCO4-205ENST00000529714 LRRCC1Q9C099 1032 aa16.85■□□□□ 0.29
SMCO4-205ENST00000529714 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
SMCO4-205ENST00000529714 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
SMCO4-205ENST00000529714 CCDC93Q567U6 631 aa16.84■□□□□ 0.29
SMCO4-205ENST00000529714 AKAP2Q9Y2D5 859 aa16.84■□□□□ 0.29
SMCO4-205ENST00000529714 LEMD3Q9Y2U8 911 aa16.84■□□□□ 0.29
SMCO4-205ENST00000529714 C21orf2O43822 256 aa16.83■□□□□ 0.28
SMCO4-205ENST00000529714 TFCP2Q12800 502 aa16.83■□□□□ 0.28
SMCO4-205ENST00000529714 B4GALNT3Q6L9W6 998 aa16.83■□□□□ 0.28
SMCO4-205ENST00000529714 RTKN2Q8IZC4 609 aa16.83■□□□□ 0.28
SMCO4-205ENST00000529714 ANKIB1Q9P2G1 1089 aa16.83■□□□□ 0.28
SMCO4-205ENST00000529714 BCS1LQ9Y276 419 aa16.83■□□□□ 0.28
SMCO4-205ENST00000529714 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
SMCO4-205ENST00000529714 ARAP2Q8WZ64 1704 aa16.82■□□□□ 0.28
SMCO4-205ENST00000529714 DUOX1Q9NRD9 1551 aa16.82■□□□□ 0.28
SMCO4-205ENST00000529714 ZNF609O15014 1411 aa16.82■□□□□ 0.28
SMCO4-205ENST00000529714 ATP2B4P23634 1241 aa16.82■□□□□ 0.28
SMCO4-205ENST00000529714 GPSM2P81274 684 aa16.82■□□□□ 0.28
SMCO4-205ENST00000529714 UBE4AQ14139 1066 aa16.82■□□□□ 0.28
SMCO4-205ENST00000529714 PUM3Q15397 648 aaKnown RBP16.82■□□□□ 0.28
SMCO4-205ENST00000529714 MPNDQ8N594 471 aa16.82■□□□□ 0.28
SMCO4-205ENST00000529714 NSFL1CQ9UNZ2 370 aaKnown RBP16.82■□□□□ 0.28
SMCO4-205ENST00000529714 TAF5LO75529 589 aa16.81■□□□□ 0.28
SMCO4-205ENST00000529714 FGFR2P21802 821 aa16.81■□□□□ 0.28
SMCO4-205ENST00000529714 NUCB1Q02818 461 aa16.81■□□□□ 0.28
SMCO4-205ENST00000529714 DPP8Q6V1X1 898 aaPredicted RBP16.81■□□□□ 0.28
SMCO4-205ENST00000529714 CLASRPQ8N2M8 674 aaKnown RBP16.81■□□□□ 0.28
SMCO4-205ENST00000529714 HELBQ8NG08 1087 aaPredicted RBP16.81■□□□□ 0.28
SMCO4-205ENST00000529714 LPIN2Q92539 896 aa16.81■□□□□ 0.28
SMCO4-205ENST00000529714 RTFDC1Q9BY42 306 aaPredicted RBP16.81■□□□□ 0.28
SMCO4-205ENST00000529714 ZBTB47Q9UFB7 747 aaPredicted RBP16.81■□□□□ 0.28
SMCO4-205ENST00000529714 GGA1Q9UJY5 639 aa16.81■□□□□ 0.28
SMCO4-205ENST00000529714 ZNF804BA4D1E1 1349 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 APBB1O00213 710 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 ATP2B3Q16720 1220 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 TNNI3KQ59H18 835 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 ANKRD45Q5TZF3 282 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 OLFM4Q6UX06 510 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 SLC51AQ86UW1 340 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 SUPT20HQ8NEM7 779 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 TBC1D16Q8TBP0 767 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 PSMD1Q99460 953 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 FPGT-TNNI3KV9GXZ4 949 aa16.8■□□□□ 0.28
SMCO4-205ENST00000529714 LTBP3Q9NS15 1303 aa16.79■□□□□ 0.28
SMCO4-205ENST00000529714 UFL1O94874 794 aa16.79■□□□□ 0.28
SMCO4-205ENST00000529714 IFIT1P09914 478 aaKnown RBP16.79■□□□□ 0.28
SMCO4-205ENST00000529714 SLC5A1P13866 664 aa16.79■□□□□ 0.28
SMCO4-205ENST00000529714 KCNJ4P48050 445 aa16.79■□□□□ 0.28
SMCO4-205ENST00000529714 C15orf52Q6ZUT6 534 aaKnown RBP16.79■□□□□ 0.28
SMCO4-205ENST00000529714 CHD1LQ86WJ1 897 aa16.79■□□□□ 0.28
SMCO4-205ENST00000529714 IL1RAPL2Q9NP60 686 aa16.79■□□□□ 0.28
SMCO4-205ENST00000529714 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
SMCO4-205ENST00000529714 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.79■□□□□ 0.28
SMCO4-205ENST00000529714 MED23Q9ULK4 1368 aa16.78■□□□□ 0.28
SMCO4-205ENST00000529714 A0A1B0GUL7 405 aa16.78■□□□□ 0.28
SMCO4-205ENST00000529714 EAF2Q96CJ1 260 aaPredicted RBP16.78■□□□□ 0.28
SMCO4-205ENST00000529714 VPS33BQ9H267 617 aa16.78■□□□□ 0.28
SMCO4-205ENST00000529714 POLLQ9UGP5 575 aa16.78■□□□□ 0.28
SMCO4-205ENST00000529714 WWC3Q9ULE0 1092 aa16.78■□□□□ 0.28
SMCO4-205ENST00000529714 GOLGB1Q14789 3259 aaKnown RBP16.78■□□□□ 0.28
SMCO4-205ENST00000529714 IRS2Q9Y4H2 1338 aa16.77■□□□□ 0.28
SMCO4-205ENST00000529714 FKBP4Q02790 459 aaKnown RBP eCLIP16.77■□□□□ 0.28
SMCO4-205ENST00000529714 AACSQ86V21 672 aa16.77■□□□□ 0.28
SMCO4-205ENST00000529714 EYA3Q99504 573 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms