RNA–Protein interactions for RNA: ENST00000529573.1

PDZD3-211, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-211ENST00000529573 HDGFL1Q5TGJ6 251 aa12.91□□□□□ -0.34
PDZD3-211ENST00000529573 TBC1D16Q8TBP0 767 aa12.91□□□□□ -0.34
PDZD3-211ENST00000529573 DCPSQ96C86 337 aaKnown RBP12.91□□□□□ -0.34
PDZD3-211ENST00000529573 EYA3Q99504 573 aa12.91□□□□□ -0.34
PDZD3-211ENST00000529573 DBF4Q9UBU7 674 aaPredicted RBP12.91□□□□□ -0.34
PDZD3-211ENST00000529573 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
PDZD3-211ENST00000529573 ZNF609O15014 1411 aa12.9□□□□□ -0.34
PDZD3-211ENST00000529573 ZNF157P51786 506 aaPredicted RBP12.9□□□□□ -0.34
PDZD3-211ENST00000529573 RPS8P62241 208 aaKnown RBP12.9□□□□□ -0.34
PDZD3-211ENST00000529573 KIF4BQ2VIQ3 1234 aa12.9□□□□□ -0.34
PDZD3-211ENST00000529573 RBM26Q5T8P6 1007 aaKnown RBP12.9□□□□□ -0.34
PDZD3-211ENST00000529573 PODXL2Q9NZ53 605 aa12.9□□□□□ -0.34
PDZD3-211ENST00000529573 IRS4O14654 1257 aaPredicted RBP12.89□□□□□ -0.35
PDZD3-211ENST00000529573 SLC10A3P09131 477 aa12.89□□□□□ -0.35
PDZD3-211ENST00000529573 RALBP1Q15311 655 aa12.89□□□□□ -0.35
PDZD3-211ENST00000529573 HYPKQ9NX55 129 aa12.89□□□□□ -0.35
PDZD3-211ENST00000529573 RNF186Q9NXI6 227 aa12.89□□□□□ -0.35
PDZD3-211ENST00000529573 GGA3Q9NZ52 723 aa12.89□□□□□ -0.35
PDZD3-211ENST00000529573 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
PDZD3-211ENST00000529573 TRPA1O75762 1119 aa12.88□□□□□ -0.35
PDZD3-211ENST00000529573 ZNF280AP59817 542 aaPredicted RBP12.88□□□□□ -0.35
PDZD3-211ENST00000529573 NEUROD2Q15784 382 aa12.88□□□□□ -0.35
PDZD3-211ENST00000529573 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
PDZD3-211ENST00000529573 SULF1Q8IWU6 871 aa12.88□□□□□ -0.35
PDZD3-211ENST00000529573 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
PDZD3-211ENST00000529573 CDCA5Q96FF9 252 aa12.88□□□□□ -0.35
PDZD3-211ENST00000529573 CSRNP1Q96S65 589 aa12.88□□□□□ -0.35
PDZD3-211ENST00000529573 ZC3H12CQ9C0D7 883 aaKnown RBP12.88□□□□□ -0.35
PDZD3-211ENST00000529573 LAS1LQ9Y4W2 734 aaKnown RBP12.88□□□□□ -0.35
PDZD3-211ENST00000529573 AKAP11Q9UKA4 1901 aa12.88□□□□□ -0.35
PDZD3-211ENST00000529573 ZBTB38Q8NAP3 1195 aaPredicted RBP12.87□□□□□ -0.35
PDZD3-211ENST00000529573 SEC31BQ9NQW1 1179 aa12.87□□□□□ -0.35
PDZD3-211ENST00000529573 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
PDZD3-211ENST00000529573 PSME4Q14997 1843 aa12.86□□□□□ -0.35
PDZD3-211ENST00000529573 UFL1O94874 794 aa12.86□□□□□ -0.35
PDZD3-211ENST00000529573 DUSP27Q5VZP5 1158 aa12.86□□□□□ -0.35
PDZD3-211ENST00000529573 RSBN1LQ6PCB5 846 aaPredicted RBP12.86□□□□□ -0.35
PDZD3-211ENST00000529573 RASAL3Q86YV0 1011 aa12.86□□□□□ -0.35
PDZD3-211ENST00000529573 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
PDZD3-211ENST00000529573 AGBL3Q8NEM8 1001 aa12.86□□□□□ -0.35
PDZD3-211ENST00000529573 RUNDC1Q96C34 613 aa12.86□□□□□ -0.35
PDZD3-211ENST00000529573 GMLQ99445 158 aa12.86□□□□□ -0.35
PDZD3-211ENST00000529573 GGA1Q9UJY5 639 aa12.86□□□□□ -0.35
PDZD3-211ENST00000529573 HSP90B1P14625 803 aaKnown RBP12.85□□□□□ -0.35
PDZD3-211ENST00000529573 FKBP1BP68106 108 aa12.85□□□□□ -0.35
PDZD3-211ENST00000529573 SCARF1Q14162 830 aa12.85□□□□□ -0.35
PDZD3-211ENST00000529573 ANGEL2Q5VTE6 544 aaKnown RBP12.85□□□□□ -0.35
PDZD3-211ENST00000529573 ANKIB1Q9P2G1 1089 aa12.85□□□□□ -0.35
PDZD3-211ENST00000529573 PITPNM2Q9BZ72 1349 aa12.85□□□□□ -0.35
PDZD3-211ENST00000529573 PAPPA2Q9BXP8 1791 aa12.84□□□□□ -0.35
PDZD3-211ENST00000529573 G3V3G9 751 aa12.84□□□□□ -0.35
PDZD3-211ENST00000529573 SOX10P56693 466 aa12.84□□□□□ -0.35
PDZD3-211ENST00000529573 CCDC152Q4G0S7 254 aa12.84□□□□□ -0.35
PDZD3-211ENST00000529573 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
PDZD3-211ENST00000529573 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
PDZD3-211ENST00000529573 CTU1Q7Z7A3 348 aaKnown RBP12.84□□□□□ -0.35
PDZD3-211ENST00000529573 CCDC191Q8NCU4 936 aa12.84□□□□□ -0.35
PDZD3-211ENST00000529573 MBIPQ9NS73 344 aa12.84□□□□□ -0.35
PDZD3-211ENST00000529573 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
PDZD3-211ENST00000529573 HTTP42858 3142 aa12.84□□□□□ -0.35
PDZD3-211ENST00000529573 PDE8AO60658 829 aa12.83□□□□□ -0.36
PDZD3-211ENST00000529573 PCCAP05165 728 aaPredicted RBP12.83□□□□□ -0.36
PDZD3-211ENST00000529573 USP17L8P0C7I0 530 aa12.83□□□□□ -0.36
PDZD3-211ENST00000529573 ZNF853P0CG23 659 aa12.83□□□□□ -0.36
PDZD3-211ENST00000529573 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
PDZD3-211ENST00000529573 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
PDZD3-211ENST00000529573 MYOZ2Q9NPC6 264 aa12.83□□□□□ -0.36
PDZD3-211ENST00000529573 XDHP47989 1333 aa12.83□□□□□ -0.36
PDZD3-211ENST00000529573 PODNQ7Z5L7 613 aa12.82□□□□□ -0.36
PDZD3-211ENST00000529573 ADAMTS8Q9UP79 889 aa12.82□□□□□ -0.36
PDZD3-211ENST00000529573 USP17L3A6NCW0 530 aa12.81□□□□□ -0.36
PDZD3-211ENST00000529573 USP17L4A6NCW7 530 aa12.81□□□□□ -0.36
PDZD3-211ENST00000529573 ATP2B4P23634 1241 aa12.81□□□□□ -0.36
PDZD3-211ENST00000529573 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.36
PDZD3-211ENST00000529573 MOB2Q70IA6 237 aa12.81□□□□□ -0.36
PDZD3-211ENST00000529573 USP17L1Q7RTZ2 530 aa12.81□□□□□ -0.36
PDZD3-211ENST00000529573 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
PDZD3-211ENST00000529573 MYD88Q99836 296 aa12.81□□□□□ -0.36
PDZD3-211ENST00000529573 CWC25Q9NXE8 425 aaPredicted RBP12.81□□□□□ -0.36
PDZD3-211ENST00000529573 MKI67P46013 3256 aaKnown RBP12.81□□□□□ -0.36
PDZD3-211ENST00000529573 WTIPA6NIX2 430 aaPredicted RBP12.8□□□□□ -0.36
PDZD3-211ENST00000529573 UBE2Q2LH0YL09 131 aa12.8□□□□□ -0.36
PDZD3-211ENST00000529573 PKN2Q16513 984 aaKnown RBP12.8□□□□□ -0.36
PDZD3-211ENST00000529573 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
PDZD3-211ENST00000529573 CCDC85AQ96PX6 553 aaPredicted RBP12.8□□□□□ -0.36
PDZD3-211ENST00000529573 METTL22Q9BUU2 404 aaPredicted RBP12.8□□□□□ -0.36
PDZD3-211ENST00000529573 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
PDZD3-211ENST00000529573 CENPFP49454 3210 aa12.79□□□□□ -0.36
PDZD3-211ENST00000529573 ZNF646O15015 1829 aaPredicted RBP12.79□□□□□ -0.36
PDZD3-211ENST00000529573 NBPF9Q3BBW0 867 aa12.79□□□□□ -0.36
PDZD3-211ENST00000529573 NOM1Q5C9Z4 860 aaKnown RBP12.79□□□□□ -0.36
PDZD3-211ENST00000529573 DACT2Q5SW24 774 aa12.79□□□□□ -0.36
PDZD3-211ENST00000529573 PRPF38BQ5VTL8 546 aaKnown RBP12.79□□□□□ -0.36
PDZD3-211ENST00000529573 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
PDZD3-211ENST00000529573 SCAF8Q9UPN6 1271 aaKnown RBP12.79□□□□□ -0.36
PDZD3-211ENST00000529573 MED23Q9ULK4 1368 aa12.79□□□□□ -0.36
PDZD3-211ENST00000529573 TM4SF4P48230 202 aa12.78□□□□□ -0.36
PDZD3-211ENST00000529573 CTSWP56202 376 aa12.78□□□□□ -0.36
PDZD3-211ENST00000529573 PRAMEF18Q5VWM3 479 aa12.78□□□□□ -0.36
PDZD3-211ENST00000529573 ZNF296Q8WUU4 475 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms