RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 CCDC8Q9H0W5 538 aaPredicted RBP18.85■□□□□ 0.61
TM9SF1-208ENST00000529332 TLR7Q9NYK1 1049 aaKnown RBP18.85■□□□□ 0.61
TM9SF1-208ENST00000529332 ERVV-1B6SEH8 477 aa18.85■□□□□ 0.61
TM9SF1-208ENST00000529332 GIGYF2Q6Y7W6 1299 aaKnown RBP18.85■□□□□ 0.61
TM9SF1-208ENST00000529332 DZIP3Q86Y13 1208 aaKnown RBP18.85■□□□□ 0.61
TM9SF1-208ENST00000529332 ZNF500O60304 480 aaPredicted RBP18.84■□□□□ 0.61
TM9SF1-208ENST00000529332 PHF14O94880 888 aa18.84■□□□□ 0.61
TM9SF1-208ENST00000529332 EIF5P55010 431 aaKnown RBP18.84■□□□□ 0.61
TM9SF1-208ENST00000529332 G3BP1Q13283 466 aaKnown RBP eCLIP18.84■□□□□ 0.61
TM9SF1-208ENST00000529332 NMIQ13287 307 aaPredicted RBP18.84■□□□□ 0.61
TM9SF1-208ENST00000529332 PTF1AQ7RTS3 328 aa18.84■□□□□ 0.61
TM9SF1-208ENST00000529332 ZKSCAN5Q9Y2L8 839 aa18.84■□□□□ 0.61
TM9SF1-208ENST00000529332 RBM8AQ9Y5S9 174 aaKnown RBP18.84■□□□□ 0.61
TM9SF1-208ENST00000529332 CYP46A1Q9Y6A2 500 aa18.84■□□□□ 0.61
TM9SF1-208ENST00000529332 GJB2P29033 226 aa18.83■□□□□ 0.61
TM9SF1-208ENST00000529332 TRIM28Q13263 835 aaKnown RBP18.83■□□□□ 0.61
TM9SF1-208ENST00000529332 COL9A3Q14050 684 aaPredicted RBP18.83■□□□□ 0.61
TM9SF1-208ENST00000529332 UBE3BQ7Z3V4 1068 aa18.83■□□□□ 0.61
TM9SF1-208ENST00000529332 ISCA1Q9BUE6 129 aa18.83■□□□□ 0.61
TM9SF1-208ENST00000529332 TAF1LQ8IZX4 1826 aa18.83■□□□□ 0.61
TM9SF1-208ENST00000529332 CREB3L3Q68CJ9 461 aa18.83■□□□□ 0.6
TM9SF1-208ENST00000529332 KLHDC4Q8TBB5 520 aa18.83■□□□□ 0.6
TM9SF1-208ENST00000529332 SIL1Q9H173 461 aa18.83■□□□□ 0.6
TM9SF1-208ENST00000529332 CNTNAP4Q9C0A0 1308 aa18.83■□□□□ 0.6
TM9SF1-208ENST00000529332 ME3Q16798 604 aa18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 CCDC183Q5T5S1 534 aa18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 MAP4K1Q92918 833 aa18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 MTMR6Q9Y217 621 aa18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 UBE2HP62256 183 aa18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 LINC00116Q8NCU8 138 aa18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 ZSCAN31Q96LW9 406 aaPredicted RBP18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 SH2B1Q9NRF2 756 aaPredicted RBP18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 SNRKQ9NRH2 765 aa18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 CCDC39Q9UFE4 941 aa18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 CCNL1Q9UK58 526 aaPredicted RBP18.82■□□□□ 0.6
TM9SF1-208ENST00000529332 H7C1W4 665 aa18.81■□□□□ 0.6
TM9SF1-208ENST00000529332 RXRBP28702 533 aa18.81■□□□□ 0.6
TM9SF1-208ENST00000529332 TPRNQ4KMQ1 711 aa18.81■□□□□ 0.6
TM9SF1-208ENST00000529332 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.81■□□□□ 0.6
TM9SF1-208ENST00000529332 BOLA2Q9H3K6 86 aa18.81■□□□□ 0.6
TM9SF1-208ENST00000529332 BCORQ6W2J9 1755 aa18.81■□□□□ 0.6
TM9SF1-208ENST00000529332 A0A0D9SFI3 127 aa18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 FIBPO43427 364 aa18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 TPM2P07951 284 aa18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 ZKSCAN1P17029 563 aaPredicted RBP18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 EPHA10Q5JZY3 1008 aa18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 RC3H1Q5TC82 1133 aaKnown RBP18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 NECAB1Q8N987 351 aa18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 HIP1O00291 1037 aa18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 SLC27A2O14975 620 aa18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 TPCN1Q9ULQ1 816 aa18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 TBC1D2BQ9UPU7 963 aa18.8■□□□□ 0.6
TM9SF1-208ENST00000529332 CASP7P55210 303 aa18.79■□□□□ 0.6
TM9SF1-208ENST00000529332 ATP6V1DQ9Y5K8 247 aa18.79■□□□□ 0.6
TM9SF1-208ENST00000529332 MCM5P33992 734 aa18.79■□□□□ 0.6
TM9SF1-208ENST00000529332 KCNJ4P48050 445 aa18.79■□□□□ 0.6
TM9SF1-208ENST00000529332 DNM1Q05193 864 aaKnown RBP18.79■□□□□ 0.6
TM9SF1-208ENST00000529332 HLFQ16534 295 aa18.79■□□□□ 0.6
TM9SF1-208ENST00000529332 FSD1Q9BTV5 496 aa18.78■□□□□ 0.6
TM9SF1-208ENST00000529332 TAF6LQ9Y6J9 622 aa18.78■□□□□ 0.6
TM9SF1-208ENST00000529332 MED23Q9ULK4 1368 aa18.78■□□□□ 0.6
TM9SF1-208ENST00000529332 C4BP0C0L5 1744 aa18.77■□□□□ 0.6
TM9SF1-208ENST00000529332 PCCAP05165 728 aaPredicted RBP18.77■□□□□ 0.6
TM9SF1-208ENST00000529332 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
TM9SF1-208ENST00000529332 FAM184AQ8NB25 1140 aa18.77■□□□□ 0.6
TM9SF1-208ENST00000529332 ZNF652Q9Y2D9 606 aa18.77■□□□□ 0.6
TM9SF1-208ENST00000529332 SCN7AQ01118 1682 aa18.77■□□□□ 0.59
TM9SF1-208ENST00000529332 PRKCSHP14314 528 aaPredicted RBP18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 HMGB2P26583 209 aaKnown RBP18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 UVSSAQ2YD98 709 aa18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 ZNF589Q86UQ0 364 aaPredicted RBP18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 NLRP10Q86W26 655 aa18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 JARID2Q92833 1246 aaPredicted RBP18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 VPS37CA5D8V6 355 aaPredicted RBP18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 LETM1O95202 739 aaPredicted RBP18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 KCNQ4P56696 695 aa18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 ZBTB38Q8NAP3 1195 aaPredicted RBP18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 EDC3Q96F86 508 aaKnown RBP18.76■□□□□ 0.59
TM9SF1-208ENST00000529332 TRIM37O94972 964 aa18.75■□□□□ 0.59
TM9SF1-208ENST00000529332 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
TM9SF1-208ENST00000529332 HCLS1P14317 486 aaPredicted RBP18.75■□□□□ 0.59
TM9SF1-208ENST00000529332 GPTP24298 496 aa18.75■□□□□ 0.59
TM9SF1-208ENST00000529332 TCEANC2Q96MN5 208 aa18.75■□□□□ 0.59
TM9SF1-208ENST00000529332 RGL2O15211 777 aa18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 RPS6KA4O75676 772 aa18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 PSMA5P28066 241 aa18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 FUCA2Q9BTY2 467 aa18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 R3HCC1Q9Y3T6 440 aaKnown RBP18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 MYH3P11055 1940 aa18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 RFX5P48382 616 aaPredicted RBP18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 SLC27A3Q5K4L6 730 aa18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 ZNF34Q8IZ26 560 aa18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 USP25Q9UHP3 1055 aa18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 CDHR2Q9BYE9 1310 aa18.74■□□□□ 0.59
TM9SF1-208ENST00000529332 RRP9O43818 475 aaKnown RBP18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 PTMAP06454 111 aaKnown RBP18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 TERF1P54274 439 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 BLOC1S2Q6QNY1 142 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 COPRSQ9NQ92 184 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 DBNLQ9UJU6 430 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms