RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 BSDC1Q9NW68 430 aaPredicted RBP15.37■□□□□ 0.05
COPB1-206ENST00000529210 PSME4Q14997 1843 aa15.36■□□□□ 0.05
COPB1-206ENST00000529210 SLFN5Q08AF3 891 aa15.36■□□□□ 0.05
COPB1-206ENST00000529210 GREM2Q9H772 168 aa15.36■□□□□ 0.05
COPB1-206ENST00000529210 ADARB2Q9NS39 739 aaKnown RBP15.36■□□□□ 0.05
COPB1-206ENST00000529210 XDHP47989 1333 aa15.36■□□□□ 0.05
COPB1-206ENST00000529210 C6orf229H3BNL8 230 aa15.35■□□□□ 0.05
COPB1-206ENST00000529210 EAPPQ56P03 285 aaPredicted RBP15.35■□□□□ 0.05
COPB1-206ENST00000529210 TRMT2AQ8IZ69 625 aaKnown RBP15.35■□□□□ 0.05
COPB1-206ENST00000529210 DPF2Q92785 391 aa15.35■□□□□ 0.05
COPB1-206ENST00000529210 GGA1Q9UJY5 639 aa15.35■□□□□ 0.05
COPB1-206ENST00000529210 PCNTO95613 3336 aa15.35■□□□□ 0.05
COPB1-206ENST00000529210 ALDH1L1O75891 902 aa15.34■□□□□ 0.05
COPB1-206ENST00000529210 RAD17O75943 681 aa15.34■□□□□ 0.05
COPB1-206ENST00000529210 GMPSP49915 693 aaPredicted RBP15.34■□□□□ 0.05
COPB1-206ENST00000529210 CNTROBQ8N137 903 aa15.34■□□□□ 0.05
COPB1-206ENST00000529210 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
COPB1-206ENST00000529210 PGAP2Q9UHJ9 254 aa15.34■□□□□ 0.05
COPB1-206ENST00000529210 MINPP1Q9UNW1 487 aa15.34■□□□□ 0.05
COPB1-206ENST00000529210 SCN9AQ15858 1988 aa15.33■□□□□ 0.05
COPB1-206ENST00000529210 F6X3S4 739 aa15.33■□□□□ 0.04
COPB1-206ENST00000529210 ECE2O60344 883 aa15.33■□□□□ 0.04
COPB1-206ENST00000529210 UFL1O94874 794 aa15.33■□□□□ 0.04
COPB1-206ENST00000529210 ATP2B4P23634 1241 aa15.33■□□□□ 0.04
COPB1-206ENST00000529210 RPS12P25398 132 aaKnown RBP15.33■□□□□ 0.04
COPB1-206ENST00000529210 ZC3H15Q8WU90 426 aaKnown RBP15.33■□□□□ 0.04
COPB1-206ENST00000529210 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
COPB1-206ENST00000529210 DBNDD1Q9H9R9 158 aa15.33■□□□□ 0.04
COPB1-206ENST00000529210 ANKIB1Q9P2G1 1089 aa15.33■□□□□ 0.04
COPB1-206ENST00000529210 CLEC11AQ9Y240 323 aa15.33■□□□□ 0.04
COPB1-206ENST00000529210 SPEF2Q9C093 1822 aa15.33■□□□□ 0.04
COPB1-206ENST00000529210 PSMD14O00487 310 aa15.32■□□□□ 0.04
COPB1-206ENST00000529210 ITGA6P23229 1130 aa15.32■□□□□ 0.04
COPB1-206ENST00000529210 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
COPB1-206ENST00000529210 PTPRCP08575 1304 aa15.32■□□□□ 0.04
COPB1-206ENST00000529210 MED23Q9ULK4 1368 aa15.32■□□□□ 0.04
COPB1-206ENST00000529210 TMEM88BA6NKF7 163 aa15.31■□□□□ 0.04
COPB1-206ENST00000529210 GRM8O00222 908 aa15.31■□□□□ 0.04
COPB1-206ENST00000529210 RIMBP2O15034 1052 aa15.31■□□□□ 0.04
COPB1-206ENST00000529210 VIL1P09327 827 aaKnown RBP15.31■□□□□ 0.04
COPB1-206ENST00000529210 CT47B1P0C2W7 299 aaPredicted RBP15.31■□□□□ 0.04
COPB1-206ENST00000529210 IGHMBP2P38935 993 aaKnown RBP15.31■□□□□ 0.04
COPB1-206ENST00000529210 FOXO4P98177 505 aa15.31■□□□□ 0.04
COPB1-206ENST00000529210 MAP1SQ66K74 1059 aaPredicted RBP15.31■□□□□ 0.04
COPB1-206ENST00000529210 UTYO14607 1347 aa15.31■□□□□ 0.04
COPB1-206ENST00000529210 TRPM7Q96QT4 1865 aa15.31■□□□□ 0.04
COPB1-206ENST00000529210 CNTNAP1P78357 1384 aa15.3■□□□□ 0.04
COPB1-206ENST00000529210 FAM161AQ3B820 660 aa15.3■□□□□ 0.04
COPB1-206ENST00000529210 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
COPB1-206ENST00000529210 PODNQ7Z5L7 613 aa15.3■□□□□ 0.04
COPB1-206ENST00000529210 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
COPB1-206ENST00000529210 SRCIN1Q9C0H9 1055 aa15.3■□□□□ 0.04
COPB1-206ENST00000529210 CNOT7Q9UIV1 285 aaKnown RBP15.3■□□□□ 0.04
COPB1-206ENST00000529210 LEMD3Q9Y2U8 911 aa15.3■□□□□ 0.04
COPB1-206ENST00000529210 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
COPB1-206ENST00000529210 H7C1D1 291 aa15.29■□□□□ 0.04
COPB1-206ENST00000529210 CCT4P50991 539 aaKnown RBP15.29■□□□□ 0.04
COPB1-206ENST00000529210 HIRAP54198 1017 aaPredicted RBP15.29■□□□□ 0.04
COPB1-206ENST00000529210 DOK7Q18PE1 504 aa15.29■□□□□ 0.04
COPB1-206ENST00000529210 GPR101Q96P66 508 aaPredicted RBP15.29■□□□□ 0.04
COPB1-206ENST00000529210 ANKRD2Q9GZV1 360 aa15.29■□□□□ 0.04
COPB1-206ENST00000529210 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
COPB1-206ENST00000529210 A0A1B0GUL6 1792 aa15.29■□□□□ 0.04
COPB1-206ENST00000529210 ANKRD18BA2A2Z9 1011 aa15.28■□□□□ 0.04
COPB1-206ENST00000529210 BRPF1P55201 1214 aaPredicted RBP15.28■□□□□ 0.04
COPB1-206ENST00000529210 MICALL2Q8IY33 904 aa15.28■□□□□ 0.04
COPB1-206ENST00000529210 AGBL3Q8NEM8 1001 aa15.28■□□□□ 0.04
COPB1-206ENST00000529210 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
COPB1-206ENST00000529210 KCNQ5Q9NR82 932 aa15.28■□□□□ 0.04
COPB1-206ENST00000529210 RASSF10A6NK89 507 aa15.27■□□□□ 0.04
COPB1-206ENST00000529210 TRPM4Q8TD43 1214 aa15.27■□□□□ 0.04
COPB1-206ENST00000529210 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
COPB1-206ENST00000529210 GMLQ99445 158 aa15.27■□□□□ 0.04
COPB1-206ENST00000529210 MPHOSPH8Q99549 860 aa15.27■□□□□ 0.04
COPB1-206ENST00000529210 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
COPB1-206ENST00000529210 IFIT5Q13325 482 aaKnown RBP15.26■□□□□ 0.03
COPB1-206ENST00000529210 EPHA10Q5JZY3 1008 aa15.26■□□□□ 0.03
COPB1-206ENST00000529210 RSBN1LQ6PCB5 846 aaPredicted RBP15.26■□□□□ 0.03
COPB1-206ENST00000529210 C15orf52Q6ZUT6 534 aaKnown RBP15.26■□□□□ 0.03
COPB1-206ENST00000529210 COA1Q9GZY4 146 aa15.26■□□□□ 0.03
COPB1-206ENST00000529210 C9orf78Q9NZ63 289 aaPredicted RBP15.26■□□□□ 0.03
COPB1-206ENST00000529210 ZNF804BA4D1E1 1349 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 IRS2Q9Y4H2 1338 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 USP17L3A6NCW0 530 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 USP17L4A6NCW7 530 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 WTIPA6NIX2 430 aaPredicted RBP15.25■□□□□ 0.03
COPB1-206ENST00000529210 G3V3G9 751 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 MMP14P50281 582 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 ZNF280AP59817 542 aaPredicted RBP15.25■□□□□ 0.03
COPB1-206ENST00000529210 CHRNDQ07001 517 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 RABL6Q3YEC7 729 aaPredicted RBP15.25■□□□□ 0.03
COPB1-206ENST00000529210 DCAF8Q5TAQ9 597 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 SLC4A10Q6U841 1118 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 LMBR1LQ6UX01 489 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 USP17L1Q7RTZ2 530 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 KAZALD1Q96I82 304 aa15.25■□□□□ 0.03
COPB1-206ENST00000529210 CST9Q5W186 159 aa15.24■□□□□ 0.03
COPB1-206ENST00000529210 CDC37L1Q7L3B6 337 aa15.24■□□□□ 0.03
COPB1-206ENST00000529210 THSD7BQ9C0I4 1608 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms