RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 HTTP42858 3142 aa23.42■■□□□ 1.34
LTBP3-211ENST00000528966 NEFMP07197 916 aa23.42■■□□□ 1.34
LTBP3-211ENST00000528966 AIMP1Q12904 312 aaKnown RBP23.42■■□□□ 1.34
LTBP3-211ENST00000528966 XAGE3Q8WTP9 111 aa23.42■■□□□ 1.34
LTBP3-211ENST00000528966 TSPYL4Q9UJ04 414 aa23.42■■□□□ 1.34
LTBP3-211ENST00000528966 VIL1P09327 827 aaKnown RBP23.41■■□□□ 1.34
LTBP3-211ENST00000528966 CCER1Q8TC90 406 aaPredicted RBP23.41■■□□□ 1.34
LTBP3-211ENST00000528966 TBC1D8O95759 1140 aa23.4■■□□□ 1.34
LTBP3-211ENST00000528966 HDAC9Q9UKV0 1011 aa23.4■■□□□ 1.34
LTBP3-211ENST00000528966 PSME4Q14997 1843 aa23.39■■□□□ 1.33
LTBP3-211ENST00000528966 ANGEL2Q5VTE6 544 aaKnown RBP23.39■■□□□ 1.33
LTBP3-211ENST00000528966 TBC1D16Q8TBP0 767 aa23.39■■□□□ 1.33
LTBP3-211ENST00000528966 NECTIN2Q92692 538 aa23.39■■□□□ 1.33
LTBP3-211ENST00000528966 FKBP1BP68106 108 aa23.38■■□□□ 1.33
LTBP3-211ENST00000528966 SF3B3Q15393 1217 aaKnown RBP23.38■■□□□ 1.33
LTBP3-211ENST00000528966 MOB2Q70IA6 237 aa23.38■■□□□ 1.33
LTBP3-211ENST00000528966 EYA3Q99504 573 aa23.38■■□□□ 1.33
LTBP3-211ENST00000528966 ZNF609O15014 1411 aa23.37■■□□□ 1.33
LTBP3-211ENST00000528966 ZNF280AP59817 542 aaPredicted RBP23.37■■□□□ 1.33
LTBP3-211ENST00000528966 SCARF1Q14162 830 aa23.37■■□□□ 1.33
LTBP3-211ENST00000528966 CENPFP49454 3210 aa23.37■■□□□ 1.33
LTBP3-211ENST00000528966 GCC1Q96CN9 775 aa23.36■■□□□ 1.33
LTBP3-211ENST00000528966 FAM89AQ96GI7 184 aa23.36■■□□□ 1.33
LTBP3-211ENST00000528966 FBXO46Q6PJ61 603 aaPredicted RBP23.35■■□□□ 1.33
LTBP3-211ENST00000528966 GPR25O00155 361 aa23.34■■□□□ 1.33
LTBP3-211ENST00000528966 ZC3H12CQ9C0D7 883 aaKnown RBP23.34■■□□□ 1.33
LTBP3-211ENST00000528966 SCAF8Q9UPN6 1271 aaKnown RBP23.34■■□□□ 1.33
LTBP3-211ENST00000528966 UBE2Q2LH0YL09 131 aa23.33■■□□□ 1.33
LTBP3-211ENST00000528966 NOM1Q5C9Z4 860 aaKnown RBP23.33■■□□□ 1.33
LTBP3-211ENST00000528966 RSBN1LQ6PCB5 846 aaPredicted RBP23.33■■□□□ 1.33
LTBP3-211ENST00000528966 PITPNM2Q9BZ72 1349 aa23.33■■□□□ 1.32
LTBP3-211ENST00000528966 TM4SF4P48230 202 aa23.32■■□□□ 1.32
LTBP3-211ENST00000528966 HABP4Q5JVS0 413 aaKnown RBP23.32■■□□□ 1.32
LTBP3-211ENST00000528966 AGBL3Q8NEM8 1001 aa23.32■■□□□ 1.32
LTBP3-211ENST00000528966 ISCA1Q9BUE6 129 aa23.32■■□□□ 1.32
LTBP3-211ENST00000528966 PODXL2Q9NZ53 605 aa23.32■■□□□ 1.32
LTBP3-211ENST00000528966 RPS8P62241 208 aaKnown RBP23.31■■□□□ 1.32
LTBP3-211ENST00000528966 GMLQ99445 158 aa23.31■■□□□ 1.32
LTBP3-211ENST00000528966 MYOZ2Q9NPC6 264 aa23.31■■□□□ 1.32
LTBP3-211ENST00000528966 BRCA2P51587 3418 aa23.31■■□□□ 1.32
LTBP3-211ENST00000528966 MAPK8IP3Q9UPT6 1336 aa23.31■■□□□ 1.32
LTBP3-211ENST00000528966 ATP5J2-PTCD1G3V325 749 aa23.3■■□□□ 1.32
LTBP3-211ENST00000528966 UFL1O94874 794 aa23.3■■□□□ 1.32
LTBP3-211ENST00000528966 RTL5Q5HYW3 569 aaPredicted RBP23.3■■□□□ 1.32
LTBP3-211ENST00000528966 PRAMEF18Q5VWM3 479 aa23.3■■□□□ 1.32
LTBP3-211ENST00000528966 R3HDMLQ9H3Y0 253 aa23.3■■□□□ 1.32
LTBP3-211ENST00000528966 BABAM1Q9NWV8 329 aa23.3■■□□□ 1.32
LTBP3-211ENST00000528966 KIAA0100Q14667 2235 aaKnown RBP23.3■■□□□ 1.32
LTBP3-211ENST00000528966 KRT24Q2M2I5 525 aa23.29■■□□□ 1.32
LTBP3-211ENST00000528966 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
LTBP3-211ENST00000528966 CHPF2Q9P2E5 772 aa23.29■■□□□ 1.32
LTBP3-211ENST00000528966 G3V3G9 751 aa23.28■■□□□ 1.32
LTBP3-211ENST00000528966 USP17L8P0C7I0 530 aa23.28■■□□□ 1.32
LTBP3-211ENST00000528966 DCAF8Q5TAQ9 597 aa23.28■■□□□ 1.32
LTBP3-211ENST00000528966 IRS4O14654 1257 aaPredicted RBP23.27■■□□□ 1.32
LTBP3-211ENST00000528966 MKRN3Q13064 507 aaKnown RBP23.27■■□□□ 1.32
LTBP3-211ENST00000528966 CFHR5Q9BXR6 569 aa23.27■■□□□ 1.32
LTBP3-211ENST00000528966 SEC31BQ9NQW1 1179 aa23.27■■□□□ 1.32
LTBP3-211ENST00000528966 FKTNO75072 461 aa23.26■■□□□ 1.31
LTBP3-211ENST00000528966 RIPK4P57078 832 aa23.26■■□□□ 1.31
LTBP3-211ENST00000528966 ANKRD13DQ6ZTN6 518 aa23.26■■□□□ 1.31
LTBP3-211ENST00000528966 ANKIB1Q9P2G1 1089 aa23.26■■□□□ 1.31
LTBP3-211ENST00000528966 GGA1Q9UJY5 639 aa23.26■■□□□ 1.31
LTBP3-211ENST00000528966 ZNF646O15015 1829 aaPredicted RBP23.25■■□□□ 1.31
LTBP3-211ENST00000528966 NBPF9Q3BBW0 867 aa23.25■■□□□ 1.31
LTBP3-211ENST00000528966 POTEFA5A3E0 1075 aa23.24■■□□□ 1.31
LTBP3-211ENST00000528966 TTLL12Q14166 644 aaPredicted RBP23.24■■□□□ 1.31
LTBP3-211ENST00000528966 PNNQ9H307 717 aaKnown RBP23.24■■□□□ 1.31
LTBP3-211ENST00000528966 RBBP6Q7Z6E9 1792 aaKnown RBP23.24■■□□□ 1.31
LTBP3-211ENST00000528966 SREBF2Q12772 1141 aa23.23■■□□□ 1.31
LTBP3-211ENST00000528966 USP17L3A6NCW0 530 aa23.22■■□□□ 1.31
LTBP3-211ENST00000528966 USP17L4A6NCW7 530 aa23.22■■□□□ 1.31
LTBP3-211ENST00000528966 TRIM28Q13263 835 aaKnown RBP23.22■■□□□ 1.31
LTBP3-211ENST00000528966 USP17L1Q7RTZ2 530 aa23.22■■□□□ 1.31
LTBP3-211ENST00000528966 CEP290O15078 2479 aa23.21■■□□□ 1.31
LTBP3-211ENST00000528966 PTPN12Q05209 780 aaKnown RBP23.21■■□□□ 1.31
LTBP3-211ENST00000528966 HDGFL1Q5TGJ6 251 aa23.2■■□□□ 1.3
LTBP3-211ENST00000528966 CHL1O00533 1208 aa23.19■■□□□ 1.3
LTBP3-211ENST00000528966 WNT10BO00744 389 aa23.19■■□□□ 1.3
LTBP3-211ENST00000528966 TMPOP42166 694 aaKnown RBP23.19■■□□□ 1.3
LTBP3-211ENST00000528966 FXR1P51114 621 aaKnown RBP eCLIP23.19■■□□□ 1.3
LTBP3-211ENST00000528966 PODNQ7Z5L7 613 aa23.19■■□□□ 1.3
LTBP3-211ENST00000528966 MXD3Q9BW11 206 aa23.19■■□□□ 1.3
LTBP3-211ENST00000528966 XDHP47989 1333 aa23.18■■□□□ 1.3
LTBP3-211ENST00000528966 WTIPA6NIX2 430 aaPredicted RBP23.18■■□□□ 1.3
LTBP3-211ENST00000528966 NF2P35240 595 aa23.18■■□□□ 1.3
LTBP3-211ENST00000528966 OTOP1Q7RTM1 612 aa23.18■■□□□ 1.3
LTBP3-211ENST00000528966 ZBTB38Q8NAP3 1195 aaPredicted RBP23.18■■□□□ 1.3
LTBP3-211ENST00000528966 TRIM17Q9Y577 477 aa23.18■■□□□ 1.3
LTBP3-211ENST00000528966 SPRYD7Q5W111 196 aa23.17■■□□□ 1.3
LTBP3-211ENST00000528966 DBF4Q9UBU7 674 aaPredicted RBP23.17■■□□□ 1.3
LTBP3-211ENST00000528966 LAMB1P07942 1786 aa23.17■■□□□ 1.3
LTBP3-211ENST00000528966 SZT2Q5T011 3432 aa23.16■■□□□ 1.3
LTBP3-211ENST00000528966 LMOD3Q0VAK6 560 aa23.16■■□□□ 1.3
LTBP3-211ENST00000528966 PRKG1Q13976 671 aa23.16■■□□□ 1.3
LTBP3-211ENST00000528966 DACT2Q5SW24 774 aa23.16■■□□□ 1.3
LTBP3-211ENST00000528966 LDLRAD1Q5T700 205 aa23.16■■□□□ 1.3
LTBP3-211ENST00000528966 INTS3Q68E01 1043 aaKnown RBP23.16■■□□□ 1.3
LTBP3-211ENST00000528966 TRIOBPQ9H2D6 2365 aa23.16■■□□□ 1.3
LTBP3-211ENST00000528966 CCDC152Q4G0S7 254 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms