RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 CABP4P57796 275 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 NBPF10Q6P3W6 841 aaKnown RBP9.9□□□□□ -0.82
CSTF3-208ENST00000528865 FAM173BQ6P4H8 233 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 LMBR1LQ6UX01 489 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 STOX1Q6ZVD7 989 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 UBE3BQ7Z3V4 1068 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 NBPF15Q8N660 670 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 TDRD7Q8NHU6 1098 aaKnown RBP9.9□□□□□ -0.82
CSTF3-208ENST00000528865 BRF1Q92994 677 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 TCEANC2Q96MN5 208 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 TTC12Q9H892 705 aaPredicted RBP9.9□□□□□ -0.82
CSTF3-208ENST00000528865 PKD1L3Q7Z443 1732 aa9.9□□□□□ -0.83
CSTF3-208ENST00000528865 DCCP43146 1447 aa9.9□□□□□ -0.83
CSTF3-208ENST00000528865 GLI3P10071 1580 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 ERVV-2B6SEH9 535 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 EYA2O00167 538 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 JAK2O60674 1132 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 KCNA4P22459 653 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 EVCP57679 992 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 SCRN1Q12765 414 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 NKX1-1Q15270 411 aaPredicted RBP9.89□□□□□ -0.83
CSTF3-208ENST00000528865 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.89□□□□□ -0.83
CSTF3-208ENST00000528865 FERMT3Q86UX7 667 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 JARID2Q92833 1246 aaPredicted RBP9.89□□□□□ -0.83
CSTF3-208ENST00000528865 ZNF830Q96NB3 372 aaPredicted RBP9.89□□□□□ -0.83
CSTF3-208ENST00000528865 TNMDQ9H2S6 317 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 KCNF1Q9H3M0 494 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 DACT1Q9NYF0 836 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 TFIP11Q9UBB9 837 aaKnown RBP9.89□□□□□ -0.83
CSTF3-208ENST00000528865 FBXO3Q9UK99 471 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 CFAP45Q9UL16 551 aa9.89□□□□□ -0.83
CSTF3-208ENST00000528865 GOLGA6L4A6NEF3 574 aa9.88□□□□□ -0.83
CSTF3-208ENST00000528865 ATP5J2-PTCD1G3V325 749 aa9.88□□□□□ -0.83
CSTF3-208ENST00000528865 RNF113AO15541 343 aaKnown RBP9.88□□□□□ -0.83
CSTF3-208ENST00000528865 DTNBO60941 627 aa9.88□□□□□ -0.83
CSTF3-208ENST00000528865 PTCD1O75127 700 aaKnown RBP9.88□□□□□ -0.83
CSTF3-208ENST00000528865 CTDNEP1O95476 244 aa9.88□□□□□ -0.83
CSTF3-208ENST00000528865 CCDC129Q6ZRS4 1044 aa9.88□□□□□ -0.83
CSTF3-208ENST00000528865 PLA2G4DQ86XP0 818 aa9.88□□□□□ -0.83
CSTF3-208ENST00000528865 CCDC191Q8NCU4 936 aa9.88□□□□□ -0.83
CSTF3-208ENST00000528865 NSUN7Q8NE18 718 aaKnown RBP9.88□□□□□ -0.83
CSTF3-208ENST00000528865 ZNF274Q96GC6 653 aaPredicted RBP9.88□□□□□ -0.83
CSTF3-208ENST00000528865 SEC62Q99442 399 aaKnown RBP9.88□□□□□ -0.83
CSTF3-208ENST00000528865 CBX8Q9HC52 389 aa9.88□□□□□ -0.83
CSTF3-208ENST00000528865 CWC25Q9NXE8 425 aaPredicted RBP9.88□□□□□ -0.83
CSTF3-208ENST00000528865 SPATA31A3Q5VYP0 1347 aa9.87□□□□□ -0.83
CSTF3-208ENST00000528865 CTAGE5O15320 804 aa9.87□□□□□ -0.83
CSTF3-208ENST00000528865 CSB-PGBD3P0DP91 1061 aa9.87□□□□□ -0.83
CSTF3-208ENST00000528865 ATF3P18847 181 aa9.87□□□□□ -0.83
CSTF3-208ENST00000528865 CDC25BP30305 580 aa9.87□□□□□ -0.83
CSTF3-208ENST00000528865 ZNF75DP51815 510 aa9.87□□□□□ -0.83
CSTF3-208ENST00000528865 STK3Q13188 491 aa9.87□□□□□ -0.83
CSTF3-208ENST00000528865 TRIM28Q13263 835 aaKnown RBP9.87□□□□□ -0.83
CSTF3-208ENST00000528865 DDX46Q7L014 1031 aaKnown RBP9.87□□□□□ -0.83
CSTF3-208ENST00000528865 DNAJC2Q99543 621 aaKnown RBP9.87□□□□□ -0.83
CSTF3-208ENST00000528865 ISCA1Q9BUE6 129 aa9.87□□□□□ -0.83
CSTF3-208ENST00000528865 PAG1Q9NWQ8 432 aa9.87□□□□□ -0.83
CSTF3-208ENST00000528865 PARP4Q9UKK3 1724 aaKnown RBP9.87□□□□□ -0.83
CSTF3-208ENST00000528865 SALL1Q9NSC2 1324 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 ARFGEF2Q9Y6D5 1785 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 E7EWF7 191 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 H3BQV1 296 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 NR1I2O75469 434 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 CHGBP05060 677 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 HSPD1P10809 573 aaKnown RBP9.86□□□□□ -0.83
CSTF3-208ENST00000528865 TRHP20396 242 aaPredicted RBP9.86□□□□□ -0.83
CSTF3-208ENST00000528865 RBM10P98175 930 aaKnown RBP9.86□□□□□ -0.83
CSTF3-208ENST00000528865 ANO6Q4KMQ2 910 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 IFFO2Q5TF58 517 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 TNS3Q68CZ2 1445 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 SARM1Q6SZW1 724 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 TTLL7Q6ZT98 887 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 PLA2G12BQ9BX93 195 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 PYCARDQ9ULZ3 195 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 KIF3AQ9Y496 699 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 LAMB4A4D0S4 1761 aa9.86□□□□□ -0.83
CSTF3-208ENST00000528865 SPEF2Q9C093 1822 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 GOLIM4O00461 696 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 HSP90B1P14625 803 aaKnown RBP9.85□□□□□ -0.83
CSTF3-208ENST00000528865 PDIA3P30101 505 aaKnown RBP9.85□□□□□ -0.83
CSTF3-208ENST00000528865 PIP4K2AP48426 406 aaPredicted RBP9.85□□□□□ -0.83
CSTF3-208ENST00000528865 TIMM10P62072 90 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 IQCB1Q15051 598 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 CAMK4Q16566 473 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 LRRFIP1Q32MZ4 808 aaKnown RBP9.85□□□□□ -0.83
CSTF3-208ENST00000528865 CADPS2Q86UW7 1296 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 LUZP1Q86V48 1076 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 MPNDQ8N594 471 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 ENGASEQ8NFI3 743 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 ZCRB1Q8TBF4 217 aaKnown RBP9.85□□□□□ -0.83
CSTF3-208ENST00000528865 ZNF396Q96N95 335 aaPredicted RBP9.85□□□□□ -0.83
CSTF3-208ENST00000528865 FAM13BQ9NYF5 915 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 NDUFB9Q9Y6M9 179 aa9.85□□□□□ -0.83
CSTF3-208ENST00000528865 AFDNP55196 1824 aaKnown RBP9.84□□□□□ -0.83
CSTF3-208ENST00000528865 PTPDC1A2A3K4 754 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 CSF1RP07333 972 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 ZFYP08048 801 aaPredicted RBP9.84□□□□□ -0.83
CSTF3-208ENST00000528865 IFIT1P09914 478 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms