RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 CHMP3Q9Y3E7 222 aa16.37■□□□□ 0.21
CNKSR1-211ENST00000528001 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
CNKSR1-211ENST00000528001 ZBTB7BO15156 539 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-211ENST00000528001 GNAI2P04899 355 aa16.36■□□□□ 0.21
CNKSR1-211ENST00000528001 ATP2B4P23634 1241 aa16.36■□□□□ 0.21
CNKSR1-211ENST00000528001 GPSM2P81274 684 aa16.36■□□□□ 0.21
CNKSR1-211ENST00000528001 ZNF784Q8NCA9 323 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-211ENST00000528001 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
CNKSR1-211ENST00000528001 JDP2Q8WYK2 163 aa16.36■□□□□ 0.21
CNKSR1-211ENST00000528001 GGA1Q9UJY5 639 aa16.36■□□□□ 0.21
CNKSR1-211ENST00000528001 LEMD3Q9Y2U8 911 aa16.36■□□□□ 0.21
CNKSR1-211ENST00000528001 FZD9O00144 591 aa16.35■□□□□ 0.21
CNKSR1-211ENST00000528001 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
CNKSR1-211ENST00000528001 LDHAL6AQ6ZMR3 332 aa16.35■□□□□ 0.21
CNKSR1-211ENST00000528001 ITPRIPQ8IWB1 547 aa16.35■□□□□ 0.21
CNKSR1-211ENST00000528001 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
CNKSR1-211ENST00000528001 DDX19BQ9UMR2 479 aa16.35■□□□□ 0.21
CNKSR1-211ENST00000528001 LRRFIP2Q9Y608 721 aaKnown RBP16.35■□□□□ 0.21
CNKSR1-211ENST00000528001 PPIP5K2O43314 1243 aa16.34■□□□□ 0.21
CNKSR1-211ENST00000528001 RFX5P48382 616 aaPredicted RBP16.34■□□□□ 0.21
CNKSR1-211ENST00000528001 MVPQ14764 893 aaKnown RBP16.34■□□□□ 0.21
CNKSR1-211ENST00000528001 WASHC4Q2M389 1173 aa16.34■□□□□ 0.21
CNKSR1-211ENST00000528001 DPY19L2Q6NUT2 758 aa16.34■□□□□ 0.21
CNKSR1-211ENST00000528001 LARGE2Q8N3Y3 721 aa16.34■□□□□ 0.21
CNKSR1-211ENST00000528001 POLLQ9UGP5 575 aa16.34■□□□□ 0.21
CNKSR1-211ENST00000528001 GLTPD2A6NH11 291 aa16.33■□□□□ 0.2
CNKSR1-211ENST00000528001 CHRNDQ07001 517 aa16.33■□□□□ 0.2
CNKSR1-211ENST00000528001 C15orf52Q6ZUT6 534 aaKnown RBP16.33■□□□□ 0.2
CNKSR1-211ENST00000528001 SLC51AQ86UW1 340 aa16.33■□□□□ 0.2
CNKSR1-211ENST00000528001 RIPOR2Q9Y4F9 1068 aa16.33■□□□□ 0.2
CNKSR1-211ENST00000528001 MROH5Q6ZUA9 1318 aa16.33■□□□□ 0.2
CNKSR1-211ENST00000528001 KDM2BQ8NHM5 1336 aa16.33■□□□□ 0.2
CNKSR1-211ENST00000528001 MED23Q9ULK4 1368 aa16.33■□□□□ 0.2
CNKSR1-211ENST00000528001 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
CNKSR1-211ENST00000528001 C6orf229H3BNL8 230 aa16.32■□□□□ 0.2
CNKSR1-211ENST00000528001 CIAO1O76071 339 aa16.32■□□□□ 0.2
CNKSR1-211ENST00000528001 UFL1O94874 794 aa16.32■□□□□ 0.2
CNKSR1-211ENST00000528001 PTPN12Q05209 780 aaKnown RBP16.32■□□□□ 0.2
CNKSR1-211ENST00000528001 NIM1KQ8IY84 436 aa16.32■□□□□ 0.2
CNKSR1-211ENST00000528001 PANK1Q8TE04 598 aa16.32■□□□□ 0.2
CNKSR1-211ENST00000528001 ZC3H12CQ9C0D7 883 aaKnown RBP16.32■□□□□ 0.2
CNKSR1-211ENST00000528001 COPRSQ9NQ92 184 aa16.32■□□□□ 0.2
CNKSR1-211ENST00000528001 CNNM1Q9NRU3 951 aa16.32■□□□□ 0.2
CNKSR1-211ENST00000528001 ZNRF3Q9ULT6 936 aa16.32■□□□□ 0.2
CNKSR1-211ENST00000528001 AOC3Q16853 763 aa16.31■□□□□ 0.2
CNKSR1-211ENST00000528001 ZNF594Q96JF6 807 aaPredicted RBP16.31■□□□□ 0.2
CNKSR1-211ENST00000528001 SPEF2Q9C093 1822 aa16.31■□□□□ 0.2
CNKSR1-211ENST00000528001 COL4A5P29400 1685 aa16.3■□□□□ 0.2
CNKSR1-211ENST00000528001 ZNF804BA4D1E1 1349 aa16.3■□□□□ 0.2
CNKSR1-211ENST00000528001 PLIN1O60240 522 aa16.3■□□□□ 0.2
CNKSR1-211ENST00000528001 RRP1P56182 461 aaKnown RBP16.3■□□□□ 0.2
CNKSR1-211ENST00000528001 EIF6P56537 245 aaKnown RBP16.3■□□□□ 0.2
CNKSR1-211ENST00000528001 UBE4AQ14139 1066 aa16.3■□□□□ 0.2
CNKSR1-211ENST00000528001 GPC2Q8N158 579 aa16.3■□□□□ 0.2
CNKSR1-211ENST00000528001 L3MBTL3Q96JM7 780 aaPredicted RBP16.3■□□□□ 0.2
CNKSR1-211ENST00000528001 A0A1B0GUL6 1792 aa16.29■□□□□ 0.2
CNKSR1-211ENST00000528001 WDR90Q96KV7 1748 aa16.29■□□□□ 0.2
CNKSR1-211ENST00000528001 EYA2O00167 538 aa16.29■□□□□ 0.2
CNKSR1-211ENST00000528001 SRGAP3O43295 1099 aa16.29■□□□□ 0.2
CNKSR1-211ENST00000528001 PODNQ7Z5L7 613 aa16.29■□□□□ 0.2
CNKSR1-211ENST00000528001 ZBTB40Q9NUA8 1239 aa16.29■□□□□ 0.2
CNKSR1-211ENST00000528001 ZNF609O15014 1411 aa16.28■□□□□ 0.2
CNKSR1-211ENST00000528001 IRS2Q9Y4H2 1338 aa16.28■□□□□ 0.2
CNKSR1-211ENST00000528001 IL15P40933 162 aaPredicted RBP16.28■□□□□ 0.2
CNKSR1-211ENST00000528001 ATP8B2P98198 1209 aa16.28■□□□□ 0.2
CNKSR1-211ENST00000528001 POLA2Q14181 598 aa16.28■□□□□ 0.2
CNKSR1-211ENST00000528001 VGLL2Q8N8G2 317 aa16.28■□□□□ 0.2
CNKSR1-211ENST00000528001 SSH3Q8TE77 659 aa16.28■□□□□ 0.2
CNKSR1-211ENST00000528001 GPBP1L1Q9HC44 474 aaPredicted RBP16.28■□□□□ 0.2
CNKSR1-211ENST00000528001 PDE8BO95263 885 aa16.27■□□□□ 0.2
CNKSR1-211ENST00000528001 KCNJ4P48050 445 aa16.27■□□□□ 0.2
CNKSR1-211ENST00000528001 PUS3Q9BZE2 481 aaKnown RBP16.27■□□□□ 0.2
CNKSR1-211ENST00000528001 COA1Q9GZY4 146 aa16.27■□□□□ 0.2
CNKSR1-211ENST00000528001 COG6Q9Y2V7 657 aa16.27■□□□□ 0.2
CNKSR1-211ENST00000528001 ZBTB22O15209 634 aa16.26■□□□□ 0.19
CNKSR1-211ENST00000528001 TNIP1Q15025 636 aa16.26■□□□□ 0.19
CNKSR1-211ENST00000528001 LRRC24Q50LG9 513 aa16.26■□□□□ 0.19
CNKSR1-211ENST00000528001 C20orf194Q5TEA3 1177 aa16.26■□□□□ 0.19
CNKSR1-211ENST00000528001 ATG9AQ7Z3C6 839 aa16.26■□□□□ 0.19
CNKSR1-211ENST00000528001 RPAP2Q8IXW5 612 aaPredicted RBP16.26■□□□□ 0.19
CNKSR1-211ENST00000528001 ZNF541Q9H0D2 1346 aa16.25■□□□□ 0.19
CNKSR1-211ENST00000528001 ECE2O60344 883 aa16.25■□□□□ 0.19
CNKSR1-211ENST00000528001 CXCL9Q07325 125 aa16.25■□□□□ 0.19
CNKSR1-211ENST00000528001 AAMPQ13685 434 aa16.25■□□□□ 0.19
CNKSR1-211ENST00000528001 METTL24Q5JXM2 366 aa16.25■□□□□ 0.19
CNKSR1-211ENST00000528001 CIAPIN1Q6FI81 312 aa16.25■□□□□ 0.19
CNKSR1-211ENST00000528001 CEP85Q6P2H3 762 aa16.25■□□□□ 0.19
CNKSR1-211ENST00000528001 KLHDC4Q8TBB5 520 aa16.25■□□□□ 0.19
CNKSR1-211ENST00000528001 PNMA6EA0A0J9YXQ4 647 aa16.24■□□□□ 0.19
CNKSR1-211ENST00000528001 IQCA1LA6NCM1 817 aa16.24■□□□□ 0.19
CNKSR1-211ENST00000528001 YDJCA8MPS7 323 aa16.24■□□□□ 0.19
CNKSR1-211ENST00000528001 RIMBP2O15034 1052 aa16.24■□□□□ 0.19
CNKSR1-211ENST00000528001 TAF5LO75529 589 aa16.24■□□□□ 0.19
CNKSR1-211ENST00000528001 VEGFAP15692 232 aaPredicted RBP16.24■□□□□ 0.19
CNKSR1-211ENST00000528001 PUM3Q15397 648 aaKnown RBP16.24■□□□□ 0.19
CNKSR1-211ENST00000528001 NOP58Q9Y2X3 529 aaKnown RBP16.24■□□□□ 0.19
CNKSR1-211ENST00000528001 G3V3G9 751 aa16.23■□□□□ 0.19
CNKSR1-211ENST00000528001 DDNO94850 711 aaPredicted RBP16.23■□□□□ 0.19
CNKSR1-211ENST00000528001 FGFR2P21802 821 aa16.23■□□□□ 0.19
CNKSR1-211ENST00000528001 RPS12P25398 132 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms