RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 TBC1D16Q8TBP0 767 aa24.57■■□□□ 1.52
CAPN1-211ENST00000527739 ZC3H12CQ9C0D7 883 aaKnown RBP24.57■■□□□ 1.52
CAPN1-211ENST00000527739 TAF1P21675 1872 aa24.57■■□□□ 1.52
CAPN1-211ENST00000527739 H7C1W4 665 aa24.56■■□□□ 1.52
CAPN1-211ENST00000527739 UFL1O94874 794 aa24.56■■□□□ 1.52
CAPN1-211ENST00000527739 DEFB115Q30KQ5 88 aa24.56■■□□□ 1.52
CAPN1-211ENST00000527739 LINS1Q8NG48 757 aa24.56■■□□□ 1.52
CAPN1-211ENST00000527739 TTLL11Q8NHH1 800 aa24.56■■□□□ 1.52
CAPN1-211ENST00000527739 CDC5LQ99459 802 aaKnown RBP24.56■■□□□ 1.52
CAPN1-211ENST00000527739 WBP1LQ9NX94 342 aa24.56■■□□□ 1.52
CAPN1-211ENST00000527739 GPRC5DQ9NZD1 345 aa24.56■■□□□ 1.52
CAPN1-211ENST00000527739 GGA1Q9UJY5 639 aa24.56■■□□□ 1.52
CAPN1-211ENST00000527739 YDJCA8MPS7 323 aa24.55■■□□□ 1.52
CAPN1-211ENST00000527739 F6X3S4 739 aa24.55■■□□□ 1.52
CAPN1-211ENST00000527739 USP50Q70EL3 339 aaPredicted RBP24.55■■□□□ 1.52
CAPN1-211ENST00000527739 GREM2Q9H772 168 aa24.55■■□□□ 1.52
CAPN1-211ENST00000527739 AIDAQ96BJ3 306 aa24.54■■□□□ 1.52
CAPN1-211ENST00000527739 ADARB2Q9NS39 739 aaKnown RBP24.54■■□□□ 1.52
CAPN1-211ENST00000527739 ECE2O60344 883 aa24.53■■□□□ 1.52
CAPN1-211ENST00000527739 CTCFP49711 727 aaPredicted RBP24.53■■□□□ 1.52
CAPN1-211ENST00000527739 PRDM10Q9NQV6 1147 aa24.53■■□□□ 1.52
CAPN1-211ENST00000527739 PODXL2Q9NZ53 605 aa24.53■■□□□ 1.52
CAPN1-211ENST00000527739 ABT1Q9ULW3 272 aaKnown RBP24.53■■□□□ 1.52
CAPN1-211ENST00000527739 TRAF5O00463 557 aa24.52■■□□□ 1.52
CAPN1-211ENST00000527739 ZBTB12Q9Y330 459 aaPredicted RBP24.52■■□□□ 1.52
CAPN1-211ENST00000527739 WDR33Q9C0J8 1336 aaKnown RBP24.52■■□□□ 1.52
CAPN1-211ENST00000527739 COL4A1P02462 1669 aa24.52■■□□□ 1.52
CAPN1-211ENST00000527739 PSMD14O00487 310 aa24.51■■□□□ 1.51
CAPN1-211ENST00000527739 LBX1P52954 281 aa24.51■■□□□ 1.51
CAPN1-211ENST00000527739 CNOT7Q9UIV1 285 aaKnown RBP24.51■■□□□ 1.51
CAPN1-211ENST00000527739 H7C1D1 291 aa24.5■■□□□ 1.51
CAPN1-211ENST00000527739 IGHMBP2P38935 993 aaKnown RBP24.5■■□□□ 1.51
CAPN1-211ENST00000527739 SLC4A10Q6U841 1118 aa24.5■■□□□ 1.51
CAPN1-211ENST00000527739 KCNQ5Q9NR82 932 aa24.5■■□□□ 1.51
CAPN1-211ENST00000527739 ZNF521Q96K83 1311 aa24.5■■□□□ 1.51
CAPN1-211ENST00000527739 DUOX1Q9NRD9 1551 aa24.5■■□□□ 1.51
CAPN1-211ENST00000527739 ATP2B4P23634 1241 aa24.49■■□□□ 1.51
CAPN1-211ENST00000527739 CST9Q5W186 159 aa24.49■■□□□ 1.51
CAPN1-211ENST00000527739 BSDC1Q9NW68 430 aaPredicted RBP24.49■■□□□ 1.51
CAPN1-211ENST00000527739 XDHP47989 1333 aa24.49■■□□□ 1.51
CAPN1-211ENST00000527739 E9PSI1 815 aa24.48■■□□□ 1.51
CAPN1-211ENST00000527739 HSPA8P11142 646 aaKnown RBP24.48■■□□□ 1.51
CAPN1-211ENST00000527739 ITGA6P23229 1130 aa24.48■■□□□ 1.51
CAPN1-211ENST00000527739 BEND3Q5T5X7 828 aa24.48■■□□□ 1.51
CAPN1-211ENST00000527739 MICALL2Q8IY33 904 aa24.48■■□□□ 1.51
CAPN1-211ENST00000527739 MINPP1Q9UNW1 487 aa24.48■■□□□ 1.51
CAPN1-211ENST00000527739 SHTN1A0MZ66 631 aa24.47■■□□□ 1.51
CAPN1-211ENST00000527739 CASP7P55210 303 aa24.47■■□□□ 1.51
CAPN1-211ENST00000527739 MPHOSPH8Q99549 860 aa24.47■■□□□ 1.51
CAPN1-211ENST00000527739 PLA2G12BQ9BX93 195 aa24.47■■□□□ 1.51
CAPN1-211ENST00000527739 CHMP3Q9Y3E7 222 aa24.47■■□□□ 1.51
CAPN1-211ENST00000527739 FAM161AQ3B820 660 aa24.46■■□□□ 1.51
CAPN1-211ENST00000527739 CYP4F22Q6NT55 531 aa24.46■■□□□ 1.51
CAPN1-211ENST00000527739 LRRC37AA6NMS7 1700 aa24.46■■□□□ 1.51
CAPN1-211ENST00000527739 GRM1Q13255 1194 aa24.45■■□□□ 1.5
CAPN1-211ENST00000527739 RBM26Q5T8P6 1007 aaKnown RBP24.45■■□□□ 1.5
CAPN1-211ENST00000527739 PAXIP1Q6ZW49 1069 aaPredicted RBP24.45■■□□□ 1.5
CAPN1-211ENST00000527739 C9orf78Q9NZ63 289 aaPredicted RBP24.45■■□□□ 1.5
CAPN1-211ENST00000527739 THSD7BQ9C0I4 1608 aa24.44■■□□□ 1.5
CAPN1-211ENST00000527739 WTIPA6NIX2 430 aaPredicted RBP24.44■■□□□ 1.5
CAPN1-211ENST00000527739 CSF1RP07333 972 aa24.44■■□□□ 1.5
CAPN1-211ENST00000527739 TRPM4Q8TD43 1214 aa24.44■■□□□ 1.5
CAPN1-211ENST00000527739 DPF2Q92785 391 aa24.44■■□□□ 1.5
CAPN1-211ENST00000527739 CAPNS2Q96L46 248 aa24.44■■□□□ 1.5
CAPN1-211ENST00000527739 TRPM7Q96QT4 1865 aa24.44■■□□□ 1.5
CAPN1-211ENST00000527739 RTL9Q8NET4 1388 aa24.43■■□□□ 1.5
CAPN1-211ENST00000527739 ANKRD18BA2A2Z9 1011 aa24.43■■□□□ 1.5
CAPN1-211ENST00000527739 CCER2I3L3R5 266 aa24.43■■□□□ 1.5
CAPN1-211ENST00000527739 HIRAP54198 1017 aaPredicted RBP24.43■■□□□ 1.5
CAPN1-211ENST00000527739 SLFN5Q08AF3 891 aa24.43■■□□□ 1.5
CAPN1-211ENST00000527739 SAMD7Q7Z3H4 446 aa24.43■■□□□ 1.5
CAPN1-211ENST00000527739 SRCIN1Q9C0H9 1055 aa24.43■■□□□ 1.5
CAPN1-211ENST00000527739 RPS12P25398 132 aaKnown RBP24.42■■□□□ 1.5
CAPN1-211ENST00000527739 CCT4P50991 539 aaKnown RBP24.42■■□□□ 1.5
CAPN1-211ENST00000527739 MAP2K1Q02750 393 aaPredicted RBP24.42■■□□□ 1.5
CAPN1-211ENST00000527739 TBC1D10BQ4KMP7 808 aaPredicted RBP24.42■■□□□ 1.5
CAPN1-211ENST00000527739 CDCA7LQ96GN5 454 aa24.42■■□□□ 1.5
CAPN1-211ENST00000527739 GLIS2Q9BZE0 524 aaPredicted RBP24.42■■□□□ 1.5
CAPN1-211ENST00000527739 TLL2Q9Y6L7 1015 aa24.42■■□□□ 1.5
CAPN1-211ENST00000527739 GRM8O00222 908 aa24.41■■□□□ 1.5
CAPN1-211ENST00000527739 IFIT5Q13325 482 aaKnown RBP24.41■■□□□ 1.5
CAPN1-211ENST00000527739 MRPL50Q8N5N7 158 aaKnown RBP24.41■■□□□ 1.5
CAPN1-211ENST00000527739 AOC2O75106 756 aa24.4■■□□□ 1.5
CAPN1-211ENST00000527739 ALDH1L1O75891 902 aa24.4■■□□□ 1.5
CAPN1-211ENST00000527739 VIL1P09327 827 aaKnown RBP24.4■■□□□ 1.5
CAPN1-211ENST00000527739 KCNJ4P48050 445 aa24.4■■□□□ 1.5
CAPN1-211ENST00000527739 FOXO4P98177 505 aa24.4■■□□□ 1.5
CAPN1-211ENST00000527739 LMBR1LQ6UX01 489 aa24.4■■□□□ 1.5
CAPN1-211ENST00000527739 FBXW7Q969H0 707 aa24.4■■□□□ 1.5
CAPN1-211ENST00000527739 ANKRD2Q9GZV1 360 aa24.4■■□□□ 1.5
CAPN1-211ENST00000527739 TAF7LQ5H9L4 462 aa24.39■■□□□ 1.49
CAPN1-211ENST00000527739 ZC3H15Q8WU90 426 aaKnown RBP24.39■■□□□ 1.49
CAPN1-211ENST00000527739 ZNF408Q9H9D4 720 aa24.39■■□□□ 1.49
CAPN1-211ENST00000527739 LEMD3Q9Y2U8 911 aa24.39■■□□□ 1.49
CAPN1-211ENST00000527739 CELF2O95319 508 aaKnown RBP24.38■■□□□ 1.49
CAPN1-211ENST00000527739 PODNQ7Z5L7 613 aa24.38■■□□□ 1.49
CAPN1-211ENST00000527739 SSH1Q8WYL5 1049 aa24.38■■□□□ 1.49
CAPN1-211ENST00000527739 PGAP2Q9UHJ9 254 aa24.38■■□□□ 1.49
CAPN1-211ENST00000527739 USP17L3A6NCW0 530 aa24.37■■□□□ 1.49
CAPN1-211ENST00000527739 USP17L4A6NCW7 530 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms