RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 TNNQ9UQP3 1299 aa29.08■■■□□ 2.25
LRRK1-206ENST00000527698 LRRC37AA6NMS7 1700 aa29.07■■■□□ 2.24
LRRK1-206ENST00000527698 RLBP1P12271 317 aa29.07■■■□□ 2.24
LRRK1-206ENST00000527698 FKBP4Q02790 459 aaKnown RBP eCLIP29.07■■■□□ 2.24
LRRK1-206ENST00000527698 FAM161AQ3B820 660 aa29.07■■■□□ 2.24
LRRK1-206ENST00000527698 EPHA10Q5JZY3 1008 aa29.07■■■□□ 2.24
LRRK1-206ENST00000527698 SUPT20HQ8NEM7 779 aa29.07■■■□□ 2.24
LRRK1-206ENST00000527698 VPS33BQ9H267 617 aa29.07■■■□□ 2.24
LRRK1-206ENST00000527698 DDX19BQ9UMR2 479 aa29.07■■■□□ 2.24
LRRK1-206ENST00000527698 GNAI2P04899 355 aa29.06■■■□□ 2.24
LRRK1-206ENST00000527698 TAF7LQ5H9L4 462 aa29.05■■■□□ 2.24
LRRK1-206ENST00000527698 PANK1Q8TE04 598 aa29.05■■■□□ 2.24
LRRK1-206ENST00000527698 ZBTB7BO15156 539 aaPredicted RBP29.04■■■□□ 2.24
LRRK1-206ENST00000527698 PLIN1O60240 522 aa29.04■■■□□ 2.24
LRRK1-206ENST00000527698 MVPQ14764 893 aaKnown RBP29.04■■■□□ 2.24
LRRK1-206ENST00000527698 DPY19L2Q6NUT2 758 aa29.04■■■□□ 2.24
LRRK1-206ENST00000527698 MPNDQ8N594 471 aa29.04■■■□□ 2.24
LRRK1-206ENST00000527698 ANKRD44Q8N8A2 993 aa29.04■■■□□ 2.24
LRRK1-206ENST00000527698 DPP8Q6V1X1 898 aaPredicted RBP29.03■■■□□ 2.24
LRRK1-206ENST00000527698 LRRFIP2Q9Y608 721 aaKnown RBP29.03■■■□□ 2.24
LRRK1-206ENST00000527698 RTFDC1Q9BY42 306 aaPredicted RBP29.02■■■□□ 2.24
LRRK1-206ENST00000527698 PODXL2Q9NZ53 605 aa29.02■■■□□ 2.24
LRRK1-206ENST00000527698 RRP1P56182 461 aaKnown RBP29.01■■■□□ 2.23
LRRK1-206ENST00000527698 ANKRD2Q9GZV1 360 aa29.01■■■□□ 2.23
LRRK1-206ENST00000527698 SNED1Q8TER0 1413 aa29.01■■■□□ 2.23
LRRK1-206ENST00000527698 SPEF2Q9C093 1822 aa29■■■□□ 2.23
LRRK1-206ENST00000527698 MTX1Q13505 466 aa29■■■□□ 2.23
LRRK1-206ENST00000527698 NSFL1CQ9UNZ2 370 aaKnown RBP29■■■□□ 2.23
LRRK1-206ENST00000527698 PCNTO95613 3336 aa28.99■■■□□ 2.23
LRRK1-206ENST00000527698 POTECB2RU33 542 aa28.99■■■□□ 2.23
LRRK1-206ENST00000527698 OLFM4Q6UX06 510 aa28.99■■■□□ 2.23
LRRK1-206ENST00000527698 LDHAL6AQ6ZMR3 332 aa28.99■■■□□ 2.23
LRRK1-206ENST00000527698 ANKIB1Q9P2G1 1089 aa28.99■■■□□ 2.23
LRRK1-206ENST00000527698 FBXO3Q9UK99 471 aa28.99■■■□□ 2.23
LRRK1-206ENST00000527698 XDHP47989 1333 aa28.98■■■□□ 2.23
LRRK1-206ENST00000527698 MINPP1Q9UNW1 487 aa28.98■■■□□ 2.23
LRRK1-206ENST00000527698 EYA3Q99504 573 aa28.97■■■□□ 2.23
LRRK1-206ENST00000527698 COG6Q9Y2V7 657 aa28.97■■■□□ 2.23
LRRK1-206ENST00000527698 CNNM1Q9NRU3 951 aa28.96■■■□□ 2.23
LRRK1-206ENST00000527698 ATP2B4P23634 1241 aa28.95■■■□□ 2.22
LRRK1-206ENST00000527698 GGA1Q9UJY5 639 aa28.95■■■□□ 2.22
LRRK1-206ENST00000527698 COL4A1P02462 1669 aa28.94■■■□□ 2.22
LRRK1-206ENST00000527698 IARSP41252 1262 aaKnown RBP28.94■■■□□ 2.22
LRRK1-206ENST00000527698 GPSM2P81274 684 aa28.94■■■□□ 2.22
LRRK1-206ENST00000527698 LEMD3Q9Y2U8 911 aa28.94■■■□□ 2.22
LRRK1-206ENST00000527698 JDP2Q8WYK2 163 aa28.93■■■□□ 2.22
LRRK1-206ENST00000527698 LTBP1Q14766 1721 aa28.93■■■□□ 2.22
LRRK1-206ENST00000527698 MROH5Q6ZUA9 1318 aa28.93■■■□□ 2.22
LRRK1-206ENST00000527698 C6orf229H3BNL8 230 aa28.92■■■□□ 2.22
LRRK1-206ENST00000527698 SRGAP3O43295 1099 aa28.92■■■□□ 2.22
LRRK1-206ENST00000527698 ZNF277Q9NRM2 450 aaPredicted RBP28.92■■■□□ 2.22
LRRK1-206ENST00000527698 ZBTB40Q9NUA8 1239 aa28.92■■■□□ 2.22
LRRK1-206ENST00000527698 WASHC4Q2M389 1173 aa28.91■■■□□ 2.22
LRRK1-206ENST00000527698 C20orf194Q5TEA3 1177 aa28.91■■■□□ 2.22
LRRK1-206ENST00000527698 TBC1D16Q8TBP0 767 aa28.91■■■□□ 2.22
LRRK1-206ENST00000527698 ZNF594Q96JF6 807 aaPredicted RBP28.91■■■□□ 2.22
LRRK1-206ENST00000527698 CIAO1O76071 339 aa28.9■■■□□ 2.22
LRRK1-206ENST00000527698 RFX5P48382 616 aaPredicted RBP28.9■■■□□ 2.22
LRRK1-206ENST00000527698 ATP8B2P98198 1209 aa28.9■■■□□ 2.22
LRRK1-206ENST00000527698 CHRNDQ07001 517 aa28.9■■■□□ 2.22
LRRK1-206ENST00000527698 KIAA2012Q0VF49 1180 aa28.9■■■□□ 2.22
LRRK1-206ENST00000527698 COPRSQ9NQ92 184 aa28.9■■■□□ 2.22
LRRK1-206ENST00000527698 RIPOR2Q9Y4F9 1068 aa28.9■■■□□ 2.22
LRRK1-206ENST00000527698 UFL1O94874 794 aa28.89■■■□□ 2.22
LRRK1-206ENST00000527698 PTPN12Q05209 780 aaKnown RBP28.89■■■□□ 2.22
LRRK1-206ENST00000527698 AAMPQ13685 434 aa28.89■■■□□ 2.22
LRRK1-206ENST00000527698 COL13A1Q5TAT6 717 aaPredicted RBP28.89■■■□□ 2.22
LRRK1-206ENST00000527698 LARGE2Q8N3Y3 721 aa28.89■■■□□ 2.22
LRRK1-206ENST00000527698 ZC3H12CQ9C0D7 883 aaKnown RBP28.89■■■□□ 2.22
LRRK1-206ENST00000527698 POLLQ9UGP5 575 aa28.89■■■□□ 2.22
LRRK1-206ENST00000527698 SCN4AP35499 1836 aa28.89■■■□□ 2.22
LRRK1-206ENST00000527698 PPIP5K2O43314 1243 aa28.88■■■□□ 2.21
LRRK1-206ENST00000527698 RPAP2Q8IXW5 612 aaPredicted RBP28.88■■■□□ 2.21
LRRK1-206ENST00000527698 EYA2O00167 538 aa28.87■■■□□ 2.21
LRRK1-206ENST00000527698 KCNJ4P48050 445 aa28.87■■■□□ 2.21
LRRK1-206ENST00000527698 CHADLQ6NUI6 762 aa28.86■■■□□ 2.21
LRRK1-206ENST00000527698 SSH3Q8TE77 659 aa28.86■■■□□ 2.21
LRRK1-206ENST00000527698 DUOX1Q9NRD9 1551 aa28.86■■■□□ 2.21
LRRK1-206ENST00000527698 DDNO94850 711 aaPredicted RBP28.85■■■□□ 2.21
LRRK1-206ENST00000527698 IL15P40933 162 aaPredicted RBP28.85■■■□□ 2.21
LRRK1-206ENST00000527698 NIM1KQ8IY84 436 aa28.85■■■□□ 2.21
LRRK1-206ENST00000527698 ZNF804BA4D1E1 1349 aa28.85■■■□□ 2.21
LRRK1-206ENST00000527698 A0A1B0GUL6 1792 aa28.84■■■□□ 2.21
LRRK1-206ENST00000527698 HMMRO75330 724 aa28.84■■■□□ 2.21
LRRK1-206ENST00000527698 UBE4AQ14139 1066 aa28.84■■■□□ 2.21
LRRK1-206ENST00000527698 AOC3Q16853 763 aa28.84■■■□□ 2.21
LRRK1-206ENST00000527698 SUPT16HQ9Y5B9 1047 aaKnown RBP28.84■■■□□ 2.21
LRRK1-206ENST00000527698 MED23Q9ULK4 1368 aa28.84■■■□□ 2.21
LRRK1-206ENST00000527698 IQCA1LA6NCM1 817 aa28.83■■■□□ 2.21
LRRK1-206ENST00000527698 G3V3G9 751 aa28.83■■■□□ 2.21
LRRK1-206ENST00000527698 POLA2Q14181 598 aa28.83■■■□□ 2.21
LRRK1-206ENST00000527698 METTL24Q5JXM2 366 aa28.83■■■□□ 2.21
LRRK1-206ENST00000527698 DCAF8Q5TAQ9 597 aa28.83■■■□□ 2.21
LRRK1-206ENST00000527698 L3MBTL3Q96JM7 780 aaPredicted RBP28.83■■■□□ 2.21
LRRK1-206ENST00000527698 PUS3Q9BZE2 481 aaKnown RBP28.83■■■□□ 2.21
LRRK1-206ENST00000527698 FZD9O00144 591 aa28.82■■■□□ 2.2
LRRK1-206ENST00000527698 CEP85Q6P2H3 762 aa28.82■■■□□ 2.2
LRRK1-206ENST00000527698 C15orf52Q6ZUT6 534 aaKnown RBP28.82■■■□□ 2.2
LRRK1-206ENST00000527698 SLC51AQ86UW1 340 aa28.82■■■□□ 2.2
LRRK1-206ENST00000527698 KLHDC4Q8TBB5 520 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms