RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 CAPN5O15484 640 aaPredicted RBP7.84□□□□□ -1.15
LINC01001-202ENST00000527683 AMPHP49418 695 aa7.84□□□□□ -1.15
LINC01001-202ENST00000527683 ADAM32Q8TC27 787 aa7.84□□□□□ -1.15
LINC01001-202ENST00000527683 COG3Q96JB2 828 aa7.84□□□□□ -1.15
LINC01001-202ENST00000527683 YTHDC1Q96MU7 727 aaKnown RBP7.84□□□□□ -1.15
LINC01001-202ENST00000527683 TESK2Q96S53 571 aa7.84□□□□□ -1.15
LINC01001-202ENST00000527683 ARHGAP9Q9BRR9 750 aa7.84□□□□□ -1.15
LINC01001-202ENST00000527683 ANKRD36BQ8N2N9 1353 aa7.84□□□□□ -1.16
LINC01001-202ENST00000527683 PIK3C2AO00443 1686 aa7.83□□□□□ -1.16
LINC01001-202ENST00000527683 FYB1O15117 783 aa7.83□□□□□ -1.16
LINC01001-202ENST00000527683 WDR4P57081 412 aaKnown RBP7.83□□□□□ -1.16
LINC01001-202ENST00000527683 TMF1P82094 1093 aa7.83□□□□□ -1.16
LINC01001-202ENST00000527683 CDCA8Q53HL2 280 aa7.83□□□□□ -1.16
LINC01001-202ENST00000527683 LCE2CQ5TA81 110 aa7.83□□□□□ -1.16
LINC01001-202ENST00000527683 MAP4K5Q9Y4K4 846 aa7.83□□□□□ -1.16
LINC01001-202ENST00000527683 CD2APQ9Y5K6 639 aa7.83□□□□□ -1.16
LINC01001-202ENST00000527683 NSD2O96028 1365 aa7.83□□□□□ -1.16
LINC01001-202ENST00000527683 RRS1Q15050 365 aaKnown RBP7.82□□□□□ -1.16
LINC01001-202ENST00000527683 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
LINC01001-202ENST00000527683 MSL1Q68DK7 614 aa7.82□□□□□ -1.16
LINC01001-202ENST00000527683 EDC4Q6P2E9 1401 aaKnown RBP7.82□□□□□ -1.16
LINC01001-202ENST00000527683 PRKRIP1Q9H875 184 aaPredicted RBP7.82□□□□□ -1.16
LINC01001-202ENST00000527683 A0A1W2PP64 1363 aa7.82□□□□□ -1.16
LINC01001-202ENST00000527683 ZC3H4Q9UPT8 1303 aaKnown RBP7.81□□□□□ -1.16
LINC01001-202ENST00000527683 SBF2Q86WG5 1849 aa7.81□□□□□ -1.16
LINC01001-202ENST00000527683 FSHRP23945 695 aa7.81□□□□□ -1.16
LINC01001-202ENST00000527683 NR5A1Q13285 461 aa7.81□□□□□ -1.16
LINC01001-202ENST00000527683 HSP90AB2PQ58FF8 381 aa7.81□□□□□ -1.16
LINC01001-202ENST00000527683 SMIM5Q71RC9 77 aa7.81□□□□□ -1.16
LINC01001-202ENST00000527683 VASH1Q7L8A9 365 aaPredicted RBP7.81□□□□□ -1.16
LINC01001-202ENST00000527683 AMIGO3Q86WK7 504 aa7.81□□□□□ -1.16
LINC01001-202ENST00000527683 USHBP1Q8N6Y0 703 aa7.81□□□□□ -1.16
LINC01001-202ENST00000527683 BANK1Q8NDB2 785 aa7.81□□□□□ -1.16
LINC01001-202ENST00000527683 RGPD3A6NKT7 1758 aaPredicted RBP7.81□□□□□ -1.16
LINC01001-202ENST00000527683 RGPD4Q7Z3J3 1758 aa7.81□□□□□ -1.16
LINC01001-202ENST00000527683 CGNL1Q0VF96 1302 aa7.8□□□□□ -1.16
LINC01001-202ENST00000527683 ABCC6O95255 1503 aa7.8□□□□□ -1.16
LINC01001-202ENST00000527683 CYP27B1O15528 508 aa7.8□□□□□ -1.16
LINC01001-202ENST00000527683 ZIC2O95409 532 aaPredicted RBP7.8□□□□□ -1.16
LINC01001-202ENST00000527683 FBXO45P0C2W1 286 aa7.8□□□□□ -1.16
LINC01001-202ENST00000527683 HMGB2P26583 209 aaKnown RBP7.8□□□□□ -1.16
LINC01001-202ENST00000527683 MPRIPQ6WCQ1 1025 aa7.8□□□□□ -1.16
LINC01001-202ENST00000527683 FLAD1Q8NFF5 587 aa7.8□□□□□ -1.16
LINC01001-202ENST00000527683 RAPGEF4Q8WZA2 1011 aa7.8□□□□□ -1.16
LINC01001-202ENST00000527683 TRIM47Q96LD4 638 aa7.8□□□□□ -1.16
LINC01001-202ENST00000527683 GGNBP2Q9H3C7 697 aa7.8□□□□□ -1.16
LINC01001-202ENST00000527683 UTRNP46939 3433 aa7.79□□□□□ -1.16
LINC01001-202ENST00000527683 TATP17735 454 aaPredicted RBP7.79□□□□□ -1.16
LINC01001-202ENST00000527683 PTK2Q05397 1052 aa7.79□□□□□ -1.16
LINC01001-202ENST00000527683 PIGBQ92521 554 aa7.79□□□□□ -1.16
LINC01001-202ENST00000527683 ZFP42Q96MM3 310 aa7.79□□□□□ -1.16
LINC01001-202ENST00000527683 KCTD15Q96SI1 283 aaPredicted RBP7.79□□□□□ -1.16
LINC01001-202ENST00000527683 POLR3GLQ9BT43 218 aa7.79□□□□□ -1.16
LINC01001-202ENST00000527683 GPSM3Q9Y4H4 160 aa7.79□□□□□ -1.16
LINC01001-202ENST00000527683 INTS6LQ5JSJ4 861 aaKnown RBP7.78□□□□□ -1.16
LINC01001-202ENST00000527683 ZBTB33Q86T24 672 aa7.78□□□□□ -1.16
LINC01001-202ENST00000527683 SMARCC1Q92922 1105 aaPredicted RBP7.78□□□□□ -1.16
LINC01001-202ENST00000527683 PAPPAQ13219 1627 aa7.78□□□□□ -1.16
LINC01001-202ENST00000527683 HSPA6P17066 643 aa7.77□□□□□ -1.17
LINC01001-202ENST00000527683 CBLBQ13191 982 aa7.77□□□□□ -1.17
LINC01001-202ENST00000527683 RALBP1Q15311 655 aa7.77□□□□□ -1.17
LINC01001-202ENST00000527683 PPP1R26Q5T8A7 1209 aaPredicted RBP7.77□□□□□ -1.17
LINC01001-202ENST00000527683 MEGF6O75095 1541 aa7.77□□□□□ -1.17
LINC01001-202ENST00000527683 ATP10DQ9P241 1426 aa7.77□□□□□ -1.17
LINC01001-202ENST00000527683 PALLDQ8WX93 1383 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 LOC102724428A0A0B4J2F2 783 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 SOBPA7XYQ1 873 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 ESPNB1AK53 854 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 SIK1P57059 783 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 IRF5Q13568 498 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 MRPL14Q6P1L8 145 aaKnown RBP7.76□□□□□ -1.17
LINC01001-202ENST00000527683 CCDC116Q8IYX3 515 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 LINC00116Q8NCU8 138 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 ZNF526Q8TF50 670 aaPredicted RBP7.76□□□□□ -1.17
LINC01001-202ENST00000527683 PURBQ96QR8 312 aaKnown RBP7.76□□□□□ -1.17
LINC01001-202ENST00000527683 TMPRSS4Q9NRS4 437 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 WWC3Q9ULE0 1092 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 ASAP1Q9ULH1 1129 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 TBC1D2BQ9UPU7 963 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 MYBBP1AQ9BQG0 1328 aaKnown RBP7.76□□□□□ -1.17
LINC01001-202ENST00000527683 PCDH11XQ9BZA7 1347 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 PCDH11YQ9BZA8 1340 aa7.76□□□□□ -1.17
LINC01001-202ENST00000527683 INSRP06213 1382 aa7.75□□□□□ -1.17
LINC01001-202ENST00000527683 NPC1L1Q9UHC9 1359 aa7.75□□□□□ -1.17
LINC01001-202ENST00000527683 RGPD5Q99666 1765 aa7.75□□□□□ -1.17
LINC01001-202ENST00000527683 ITPK1Q13572 414 aa7.75□□□□□ -1.17
LINC01001-202ENST00000527683 MEIOBQ8N635 442 aa7.75□□□□□ -1.17
LINC01001-202ENST00000527683 KDF1Q8NAX2 398 aaPredicted RBP7.75□□□□□ -1.17
LINC01001-202ENST00000527683 MRS2Q9HD23 443 aa7.75□□□□□ -1.17
LINC01001-202ENST00000527683 NHSQ6T4R5 1651 aa7.75□□□□□ -1.17
LINC01001-202ENST00000527683 IGSF1Q8N6C5 1336 aa7.75□□□□□ -1.17
LINC01001-202ENST00000527683 ZBBXA8MT70 800 aa7.74□□□□□ -1.17
LINC01001-202ENST00000527683 SSFA2P28290 1259 aa7.74□□□□□ -1.17
LINC01001-202ENST00000527683 ADD1P35611 737 aaKnown RBP7.74□□□□□ -1.17
LINC01001-202ENST00000527683 DNAJC5GQ8N7S2 189 aa7.74□□□□□ -1.17
LINC01001-202ENST00000527683 SLC10A4Q96EP9 437 aa7.74□□□□□ -1.17
LINC01001-202ENST00000527683 ATG3Q9NT62 314 aa7.74□□□□□ -1.17
LINC01001-202ENST00000527683 SPG7Q9UQ90 795 aa7.74□□□□□ -1.17
LINC01001-202ENST00000527683 EMILIN1Q9Y6C2 1016 aa7.74□□□□□ -1.17
LINC01001-202ENST00000527683 RTL1A6NKG5 1358 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms