RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 ZNRF3Q9ULT6 936 aa22.98■■□□□ 1.27
TRIM3-205ENST00000527237 CT47B1P0C2W7 299 aaPredicted RBP22.97■■□□□ 1.27
TRIM3-205ENST00000527237 NBPF7P0C2Y1 421 aaPredicted RBP22.97■■□□□ 1.27
TRIM3-205ENST00000527237 SCNN1DP51172 638 aa22.97■■□□□ 1.27
TRIM3-205ENST00000527237 CXCL9Q07325 125 aa22.97■■□□□ 1.27
TRIM3-205ENST00000527237 WASHC4Q2M389 1173 aa22.97■■□□□ 1.27
TRIM3-205ENST00000527237 SUCLG2Q96I99 432 aa22.97■■□□□ 1.27
TRIM3-205ENST00000527237 C9orf78Q9NZ63 289 aaPredicted RBP22.97■■□□□ 1.27
TRIM3-205ENST00000527237 ANKIB1Q9P2G1 1089 aa22.97■■□□□ 1.27
TRIM3-205ENST00000527237 TRPM7Q96QT4 1865 aa22.96■■□□□ 1.27
TRIM3-205ENST00000527237 RAD17O75943 681 aa22.96■■□□□ 1.27
TRIM3-205ENST00000527237 SMC1BQ8NDV3 1235 aa22.96■■□□□ 1.27
TRIM3-205ENST00000527237 HACL1Q9UJ83 578 aa22.96■■□□□ 1.27
TRIM3-205ENST00000527237 CHMP3Q9Y3E7 222 aa22.96■■□□□ 1.27
TRIM3-205ENST00000527237 XDHP47989 1333 aa22.96■■□□□ 1.27
TRIM3-205ENST00000527237 POLR2AP24928 1970 aaKnown RBP22.96■■□□□ 1.27
TRIM3-205ENST00000527237 IQCA1LA6NCM1 817 aa22.95■■□□□ 1.26
TRIM3-205ENST00000527237 RARSP54136 660 aaKnown RBP22.95■■□□□ 1.26
TRIM3-205ENST00000527237 FSTL1Q12841 308 aa22.95■■□□□ 1.26
TRIM3-205ENST00000527237 DOK7Q18PE1 504 aa22.95■■□□□ 1.26
TRIM3-205ENST00000527237 KAZALD1Q96I82 304 aa22.95■■□□□ 1.26
TRIM3-205ENST00000527237 BSDC1Q9NW68 430 aaPredicted RBP22.95■■□□□ 1.26
TRIM3-205ENST00000527237 GGA1Q9UJY5 639 aa22.95■■□□□ 1.26
TRIM3-205ENST00000527237 MINPP1Q9UNW1 487 aa22.95■■□□□ 1.26
TRIM3-205ENST00000527237 UTYO14607 1347 aa22.94■■□□□ 1.26
TRIM3-205ENST00000527237 EPHX2P34913 555 aa22.94■■□□□ 1.26
TRIM3-205ENST00000527237 LMBR1LQ6UX01 489 aa22.94■■□□□ 1.26
TRIM3-205ENST00000527237 NOB1Q9ULX3 412 aaKnown RBP22.94■■□□□ 1.26
TRIM3-205ENST00000527237 ECE2O60344 883 aa22.93■■□□□ 1.26
TRIM3-205ENST00000527237 IGHMBP2P38935 993 aaKnown RBP22.93■■□□□ 1.26
TRIM3-205ENST00000527237 EAPPQ56P03 285 aaPredicted RBP22.93■■□□□ 1.26
TRIM3-205ENST00000527237 EYA3Q99504 573 aa22.93■■□□□ 1.26
TRIM3-205ENST00000527237 KCNQ5Q9NR82 932 aa22.93■■□□□ 1.26
TRIM3-205ENST00000527237 ZBED9Q6R2W3 1325 aa22.92■■□□□ 1.26
TRIM3-205ENST00000527237 ANKRD18BA2A2Z9 1011 aa22.92■■□□□ 1.26
TRIM3-205ENST00000527237 EPS15P42566 896 aa22.92■■□□□ 1.26
TRIM3-205ENST00000527237 HTRA3P83110 453 aa22.92■■□□□ 1.26
TRIM3-205ENST00000527237 CIAPIN1Q6FI81 312 aa22.92■■□□□ 1.26
TRIM3-205ENST00000527237 ZNF594Q96JF6 807 aaPredicted RBP22.92■■□□□ 1.26
TRIM3-205ENST00000527237 MYH13Q9UKX3 1938 aa22.92■■□□□ 1.26
TRIM3-205ENST00000527237 BRPF1P55201 1214 aaPredicted RBP22.91■■□□□ 1.26
TRIM3-205ENST00000527237 SHTN1A0MZ66 631 aa22.9■■□□□ 1.26
TRIM3-205ENST00000527237 GMPSP49915 693 aaPredicted RBP22.9■■□□□ 1.26
TRIM3-205ENST00000527237 IFIT5Q13325 482 aaKnown RBP22.9■■□□□ 1.26
TRIM3-205ENST00000527237 BICC1Q9H694 974 aaKnown RBP22.9■■□□□ 1.26
TRIM3-205ENST00000527237 TNNQ9UQP3 1299 aa22.9■■□□□ 1.26
TRIM3-205ENST00000527237 MED23Q9ULK4 1368 aa22.89■■□□□ 1.26
TRIM3-205ENST00000527237 ARAP2Q8WZ64 1704 aa22.89■■□□□ 1.26
TRIM3-205ENST00000527237 PSMD14O00487 310 aa22.89■■□□□ 1.25
TRIM3-205ENST00000527237 ATP2B4P23634 1241 aa22.89■■□□□ 1.25
TRIM3-205ENST00000527237 KLRK1P26718 216 aa22.89■■□□□ 1.25
TRIM3-205ENST00000527237 LMOD1P29536 600 aaPredicted RBP22.89■■□□□ 1.25
TRIM3-205ENST00000527237 CCT4P50991 539 aaKnown RBP22.89■■□□□ 1.25
TRIM3-205ENST00000527237 CHADLQ6NUI6 762 aa22.89■■□□□ 1.25
TRIM3-205ENST00000527237 LDHDQ86WU2 507 aa22.89■■□□□ 1.25
TRIM3-205ENST00000527237 ANKRD44Q8N8A2 993 aa22.89■■□□□ 1.25
TRIM3-205ENST00000527237 MPHOSPH8Q99549 860 aa22.89■■□□□ 1.25
TRIM3-205ENST00000527237 ZC3H12CQ9C0D7 883 aaKnown RBP22.89■■□□□ 1.25
TRIM3-205ENST00000527237 USP44Q9H0E7 712 aa22.89■■□□□ 1.25
TRIM3-205ENST00000527237 GPRC5DQ9NZD1 345 aa22.89■■□□□ 1.25
TRIM3-205ENST00000527237 KIF16BQ96L93 1317 aa22.88■■□□□ 1.25
TRIM3-205ENST00000527237 BCAR3O75815 825 aa22.88■■□□□ 1.25
TRIM3-205ENST00000527237 CHRNDQ07001 517 aa22.88■■□□□ 1.25
TRIM3-205ENST00000527237 ZBTB12Q9Y330 459 aaPredicted RBP22.88■■□□□ 1.25
TRIM3-205ENST00000527237 SNAP23O00161 211 aa22.87■■□□□ 1.25
TRIM3-205ENST00000527237 TXNRD3Q86VQ6 643 aa22.87■■□□□ 1.25
TRIM3-205ENST00000527237 APLP1P51693 650 aa22.86■■□□□ 1.25
TRIM3-205ENST00000527237 TNIP1Q15025 636 aa22.86■■□□□ 1.25
TRIM3-205ENST00000527237 HELBQ8NG08 1087 aaPredicted RBP22.86■■□□□ 1.25
TRIM3-205ENST00000527237 TAF5LO75529 589 aa22.85■■□□□ 1.25
TRIM3-205ENST00000527237 CCDC57Q2TAC2 916 aa22.85■■□□□ 1.25
TRIM3-205ENST00000527237 RABL6Q3YEC7 729 aaPredicted RBP22.85■■□□□ 1.25
TRIM3-205ENST00000527237 API5Q9BZZ5 524 aaKnown RBP22.85■■□□□ 1.25
TRIM3-205ENST00000527237 CLEC11AQ9Y240 323 aa22.85■■□□□ 1.25
TRIM3-205ENST00000527237 ECM29Q5VYK3 1845 aa22.85■■□□□ 1.25
TRIM3-205ENST00000527237 ZNF804BA4D1E1 1349 aa22.84■■□□□ 1.25
TRIM3-205ENST00000527237 IRS2Q9Y4H2 1338 aa22.83■■□□□ 1.25
TRIM3-205ENST00000527237 G3V3G9 751 aa22.83■■□□□ 1.25
TRIM3-205ENST00000527237 TAF7LQ5H9L4 462 aa22.83■■□□□ 1.25
TRIM3-205ENST00000527237 DCAF8Q5TAQ9 597 aa22.83■■□□□ 1.25
TRIM3-205ENST00000527237 MAP1SQ66K74 1059 aaPredicted RBP22.83■■□□□ 1.25
TRIM3-205ENST00000527237 PNMA8AQ86V59 439 aaPredicted RBP22.83■■□□□ 1.25
TRIM3-205ENST00000527237 TRPM4Q8TD43 1214 aa22.83■■□□□ 1.25
TRIM3-205ENST00000527237 PUS3Q9BZE2 481 aaKnown RBP22.83■■□□□ 1.25
TRIM3-205ENST00000527237 ANKRD2Q9GZV1 360 aa22.83■■□□□ 1.25
TRIM3-205ENST00000527237 LEMD3Q9Y2U8 911 aa22.83■■□□□ 1.25
TRIM3-205ENST00000527237 TRIM27P14373 513 aa22.82■■□□□ 1.24
TRIM3-205ENST00000527237 ADARB2Q9NS39 739 aaKnown RBP22.82■■□□□ 1.24
TRIM3-205ENST00000527237 ZNF609O15014 1411 aa22.82■■□□□ 1.24
TRIM3-205ENST00000527237 PASKQ96RG2 1323 aa22.82■■□□□ 1.24
TRIM3-205ENST00000527237 LDHAL6AQ6ZMR3 332 aa22.81■■□□□ 1.24
TRIM3-205ENST00000527237 MICALL2Q8IY33 904 aa22.81■■□□□ 1.24
TRIM3-205ENST00000527237 KLHDC4Q8TBB5 520 aa22.81■■□□□ 1.24
TRIM3-205ENST00000527237 FRAT1Q92837 279 aaPredicted RBP22.81■■□□□ 1.24
TRIM3-205ENST00000527237 CNNM1Q9NRU3 951 aa22.81■■□□□ 1.24
TRIM3-205ENST00000527237 CNOT7Q9UIV1 285 aaKnown RBP22.81■■□□□ 1.24
TRIM3-205ENST00000527237 PLIN1O60240 522 aa22.8■■□□□ 1.24
TRIM3-205ENST00000527237 ITGBL1O95965 494 aaPredicted RBP22.8■■□□□ 1.24
TRIM3-205ENST00000527237 EGFRP00533 1210 aa22.8■■□□□ 1.24
TRIM3-205ENST00000527237 USP50Q70EL3 339 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms