RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 CHADLQ6NUI6 762 aa22.17■■□□□ 1.14
NR1H3-228ENST00000525441 PNMA8AQ86V59 439 aaPredicted RBP22.17■■□□□ 1.14
NR1H3-228ENST00000525441 LDHDQ86WU2 507 aa22.17■■□□□ 1.14
NR1H3-228ENST00000525441 BCL2L13Q9BXK5 485 aa22.17■■□□□ 1.14
NR1H3-228ENST00000525441 RIMBP2O15034 1052 aa22.16■■□□□ 1.14
NR1H3-228ENST00000525441 FAM161AQ3B820 660 aa22.16■■□□□ 1.14
NR1H3-228ENST00000525441 ZC3H12CQ9C0D7 883 aaKnown RBP22.16■■□□□ 1.14
NR1H3-228ENST00000525441 ATP2B4P23634 1241 aa22.15■■□□□ 1.14
NR1H3-228ENST00000525441 EAPPQ56P03 285 aaPredicted RBP22.15■■□□□ 1.14
NR1H3-228ENST00000525441 MPHOSPH8Q99549 860 aa22.15■■□□□ 1.14
NR1H3-228ENST00000525441 ANKRD18BA2A2Z9 1011 aa22.14■■□□□ 1.13
NR1H3-228ENST00000525441 G3V3G9 751 aa22.14■■□□□ 1.13
NR1H3-228ENST00000525441 RAD17O75943 681 aa22.14■■□□□ 1.13
NR1H3-228ENST00000525441 HNRNPUQ00839 825 aaKnown RBP eCLIP22.14■■□□□ 1.13
NR1H3-228ENST00000525441 DCAF8Q5TAQ9 597 aa22.14■■□□□ 1.13
NR1H3-228ENST00000525441 CHMP3Q9Y3E7 222 aa22.14■■□□□ 1.13
NR1H3-228ENST00000525441 LTBP1Q14766 1721 aa22.14■■□□□ 1.13
NR1H3-228ENST00000525441 SCNN1DP51172 638 aa22.13■■□□□ 1.13
NR1H3-228ENST00000525441 FOXO4P98177 505 aa22.13■■□□□ 1.13
NR1H3-228ENST00000525441 IFIT5Q13325 482 aaKnown RBP22.13■■□□□ 1.13
NR1H3-228ENST00000525441 DBNDD1Q9H9R9 158 aa22.13■■□□□ 1.13
NR1H3-228ENST00000525441 MINPP1Q9UNW1 487 aa22.13■■□□□ 1.13
NR1H3-228ENST00000525441 CLEC11AQ9Y240 323 aa22.13■■□□□ 1.13
NR1H3-228ENST00000525441 YDJCA8MPS7 323 aa22.12■■□□□ 1.13
NR1H3-228ENST00000525441 ECE2O60344 883 aa22.12■■□□□ 1.13
NR1H3-228ENST00000525441 POTEIP0CG38 1075 aa22.12■■□□□ 1.13
NR1H3-228ENST00000525441 POTEJP0CG39 1038 aa22.12■■□□□ 1.13
NR1H3-228ENST00000525441 GPR101Q96P66 508 aaPredicted RBP22.12■■□□□ 1.13
NR1H3-228ENST00000525441 GMPSP49915 693 aaPredicted RBP22.11■■□□□ 1.13
NR1H3-228ENST00000525441 DOK7Q18PE1 504 aa22.11■■□□□ 1.13
NR1H3-228ENST00000525441 LMBR1LQ6UX01 489 aa22.11■■□□□ 1.13
NR1H3-228ENST00000525441 ANKRD2Q9GZV1 360 aa22.11■■□□□ 1.13
NR1H3-228ENST00000525441 GPRC5DQ9NZD1 345 aa22.11■■□□□ 1.13
NR1H3-228ENST00000525441 EPS15P42566 896 aa22.1■■□□□ 1.13
NR1H3-228ENST00000525441 BRPF1P55201 1214 aaPredicted RBP22.1■■□□□ 1.13
NR1H3-228ENST00000525441 CCDC57Q2TAC2 916 aa22.1■■□□□ 1.13
NR1H3-228ENST00000525441 UTYO14607 1347 aa22.09■■□□□ 1.13
NR1H3-228ENST00000525441 CCT4P50991 539 aaKnown RBP22.09■■□□□ 1.13
NR1H3-228ENST00000525441 TAF7LQ5H9L4 462 aa22.09■■□□□ 1.13
NR1H3-228ENST00000525441 EPHA10Q5JZY3 1008 aa22.09■■□□□ 1.13
NR1H3-228ENST00000525441 USP50Q70EL3 339 aaPredicted RBP22.09■■□□□ 1.13
NR1H3-228ENST00000525441 ADARB2Q9NS39 739 aaKnown RBP22.09■■□□□ 1.13
NR1H3-228ENST00000525441 LEMD3Q9Y2U8 911 aa22.09■■□□□ 1.13
NR1H3-228ENST00000525441 NBPF7P0C2Y1 421 aaPredicted RBP22.08■■□□□ 1.13
NR1H3-228ENST00000525441 RARSP54136 660 aaKnown RBP22.08■■□□□ 1.13
NR1H3-228ENST00000525441 SUCLG2Q96I99 432 aa22.08■■□□□ 1.13
NR1H3-228ENST00000525441 API5Q9BZZ5 524 aaKnown RBP22.08■■□□□ 1.13
NR1H3-228ENST00000525441 PSMD14O00487 310 aa22.07■■□□□ 1.12
NR1H3-228ENST00000525441 NOB1Q9ULX3 412 aaKnown RBP22.07■■□□□ 1.12
NR1H3-228ENST00000525441 SPEF2Q9C093 1822 aa22.07■■□□□ 1.12
NR1H3-228ENST00000525441 MED23Q9ULK4 1368 aa22.07■■□□□ 1.12
NR1H3-228ENST00000525441 KIF16BQ96L93 1317 aa22.06■■□□□ 1.12
NR1H3-228ENST00000525441 RPS12P25398 132 aaKnown RBP22.06■■□□□ 1.12
NR1H3-228ENST00000525441 KCNJ4P48050 445 aa22.06■■□□□ 1.12
NR1H3-228ENST00000525441 DPF2Q92785 391 aa22.06■■□□□ 1.12
NR1H3-228ENST00000525441 H7C1D1 291 aa22.05■■□□□ 1.12
NR1H3-228ENST00000525441 CHRNDQ07001 517 aa22.05■■□□□ 1.12
NR1H3-228ENST00000525441 PODNQ7Z5L7 613 aa22.05■■□□□ 1.12
NR1H3-228ENST00000525441 ZNF804BA4D1E1 1349 aa22.05■■□□□ 1.12
NR1H3-228ENST00000525441 CNTROBQ8N137 903 aa22.04■■□□□ 1.12
NR1H3-228ENST00000525441 CNOT7Q9UIV1 285 aaKnown RBP22.04■■□□□ 1.12
NR1H3-228ENST00000525441 ADAMTSL1Q8N6G6 1762 aa22.04■■□□□ 1.12
NR1H3-228ENST00000525441 MAP1SQ66K74 1059 aaPredicted RBP22.03■■□□□ 1.12
NR1H3-228ENST00000525441 LDHAL6AQ6ZMR3 332 aa22.03■■□□□ 1.12
NR1H3-228ENST00000525441 MICALL2Q8IY33 904 aa22.03■■□□□ 1.12
NR1H3-228ENST00000525441 ARHGAP45Q92619 1136 aa22.03■■□□□ 1.12
NR1H3-228ENST00000525441 KAZALD1Q96I82 304 aa22.03■■□□□ 1.12
NR1H3-228ENST00000525441 USP44Q9H0E7 712 aa22.03■■□□□ 1.12
NR1H3-228ENST00000525441 BICC1Q9H694 974 aaKnown RBP22.03■■□□□ 1.12
NR1H3-228ENST00000525441 KCNQ5Q9NR82 932 aa22.03■■□□□ 1.12
NR1H3-228ENST00000525441 CNNM1Q9NRU3 951 aa22.03■■□□□ 1.12
NR1H3-228ENST00000525441 ZBTB12Q9Y330 459 aaPredicted RBP22.03■■□□□ 1.12
NR1H3-228ENST00000525441 CEP350Q5VT06 3117 aa22.03■■□□□ 1.12
NR1H3-228ENST00000525441 IPO8O15397 1037 aaKnown RBP22.02■■□□□ 1.12
NR1H3-228ENST00000525441 ITGBL1O95965 494 aaPredicted RBP22.02■■□□□ 1.12
NR1H3-228ENST00000525441 VIL1P09327 827 aaKnown RBP22.02■■□□□ 1.12
NR1H3-228ENST00000525441 HTRA3P83110 453 aa22.02■■□□□ 1.12
NR1H3-228ENST00000525441 RABL6Q3YEC7 729 aaPredicted RBP22.02■■□□□ 1.12
NR1H3-228ENST00000525441 COA1Q9GZY4 146 aa22.02■■□□□ 1.12
NR1H3-228ENST00000525441 ZBED9Q6R2W3 1325 aa22.02■■□□□ 1.12
NR1H3-228ENST00000525441 PASKQ96RG2 1323 aa22.02■■□□□ 1.12
NR1H3-228ENST00000525441 WTIPA6NIX2 430 aaPredicted RBP22.01■■□□□ 1.11
NR1H3-228ENST00000525441 DNAJC5GQ8N7S2 189 aa22.01■■□□□ 1.11
NR1H3-228ENST00000525441 ZNF594Q96JF6 807 aaPredicted RBP22.01■■□□□ 1.11
NR1H3-228ENST00000525441 HDAC5Q9UQL6 1122 aa22.01■■□□□ 1.11
NR1H3-228ENST00000525441 USP17L3A6NCW0 530 aa22■■□□□ 1.11
NR1H3-228ENST00000525441 USP17L4A6NCW7 530 aa22■■□□□ 1.11
NR1H3-228ENST00000525441 USP17L1Q7RTZ2 530 aa22■■□□□ 1.11
NR1H3-228ENST00000525441 CREBZFQ9NS37 354 aa22■■□□□ 1.11
NR1H3-228ENST00000525441 RSBN1LQ6PCB5 846 aaPredicted RBP21.99■■□□□ 1.11
NR1H3-228ENST00000525441 ANKRD44Q8N8A2 993 aa21.99■■□□□ 1.11
NR1H3-228ENST00000525441 AGBL3Q8NEM8 1001 aa21.99■■□□□ 1.11
NR1H3-228ENST00000525441 HELBQ8NG08 1087 aaPredicted RBP21.99■■□□□ 1.11
NR1H3-228ENST00000525441 ZC3H15Q8WU90 426 aaKnown RBP21.99■■□□□ 1.11
NR1H3-228ENST00000525441 KLRG1Q96E93 195 aa21.99■■□□□ 1.11
NR1H3-228ENST00000525441 SCN9AQ15858 1988 aa21.98■■□□□ 1.11
NR1H3-228ENST00000525441 TAF5LO75529 589 aa21.98■■□□□ 1.11
NR1H3-228ENST00000525441 UBTFL1P0CB47 393 aaPredicted RBP21.98■■□□□ 1.11
NR1H3-228ENST00000525441 ZNF609O15014 1411 aa21.97■■□□□ 1.11
NR1H3-228ENST00000525441 SHTN1A0MZ66 631 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms