RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 HYPKQ9NX55 129 aa16.57■□□□□ 0.24
SF3B2-203ENST00000524627 POLR2AP24928 1970 aaKnown RBP16.57■□□□□ 0.24
SF3B2-203ENST00000524627 RPS8P62241 208 aaKnown RBP16.56■□□□□ 0.24
SF3B2-203ENST00000524627 DGKZQ13574 1117 aa16.56■□□□□ 0.24
SF3B2-203ENST00000524627 TBC1D16Q8TBP0 767 aa16.56■□□□□ 0.24
SF3B2-203ENST00000524627 GBA2Q9HCG7 927 aaPredicted RBP16.56■□□□□ 0.24
SF3B2-203ENST00000524627 TRIM28Q13263 835 aaKnown RBP16.55■□□□□ 0.24
SF3B2-203ENST00000524627 KIF4BQ2VIQ3 1234 aa16.55■□□□□ 0.24
SF3B2-203ENST00000524627 RGMBQ6NW40 437 aa16.55■□□□□ 0.24
SF3B2-203ENST00000524627 RIC3Q7Z5B4 369 aa16.55■□□□□ 0.24
SF3B2-203ENST00000524627 C2orf69Q8N8R5 385 aa16.55■□□□□ 0.24
SF3B2-203ENST00000524627 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
SF3B2-203ENST00000524627 FAM155AB1AL88 458 aaPredicted RBP16.54■□□□□ 0.24
SF3B2-203ENST00000524627 G3V3G9 751 aa16.54■□□□□ 0.24
SF3B2-203ENST00000524627 RGS19P49795 217 aa16.54■□□□□ 0.24
SF3B2-203ENST00000524627 DCAF8Q5TAQ9 597 aa16.54■□□□□ 0.24
SF3B2-203ENST00000524627 ZC3H12CQ9C0D7 883 aaKnown RBP16.54■□□□□ 0.24
SF3B2-203ENST00000524627 MBIPQ9NS73 344 aa16.54■□□□□ 0.24
SF3B2-203ENST00000524627 ANKIB1Q9P2G1 1089 aa16.54■□□□□ 0.24
SF3B2-203ENST00000524627 ADAMTS8Q9UP79 889 aa16.54■□□□□ 0.24
SF3B2-203ENST00000524627 SCN9AQ15858 1988 aa16.54■□□□□ 0.24
SF3B2-203ENST00000524627 UFL1O94874 794 aa16.53■□□□□ 0.24
SF3B2-203ENST00000524627 ZNF157P51786 506 aaPredicted RBP16.53■□□□□ 0.24
SF3B2-203ENST00000524627 GOLGA2Q08379 1002 aa16.53■□□□□ 0.24
SF3B2-203ENST00000524627 DDX10Q13206 875 aaKnown RBP16.53■□□□□ 0.24
SF3B2-203ENST00000524627 ZBTB38Q8NAP3 1195 aaPredicted RBP16.53■□□□□ 0.24
SF3B2-203ENST00000524627 GGA3Q9NZ52 723 aa16.53■□□□□ 0.24
SF3B2-203ENST00000524627 ASTN2O75129 1339 aaPredicted RBP16.52■□□□□ 0.24
SF3B2-203ENST00000524627 VIL1P09327 827 aaKnown RBP16.52■□□□□ 0.24
SF3B2-203ENST00000524627 SULF1Q8IWU6 871 aa16.52■□□□□ 0.24
SF3B2-203ENST00000524627 CCDC102AQ96A19 550 aa16.52■□□□□ 0.24
SF3B2-203ENST00000524627 MYD88Q99836 296 aa16.52■□□□□ 0.24
SF3B2-203ENST00000524627 PHAXQ9H814 394 aaKnown RBP16.52■□□□□ 0.24
SF3B2-203ENST00000524627 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
SF3B2-203ENST00000524627 GGA1Q9UJY5 639 aa16.52■□□□□ 0.24
SF3B2-203ENST00000524627 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-203ENST00000524627 KIF23Q02241 960 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-203ENST00000524627 JARID2Q92833 1246 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-203ENST00000524627 CCDC85AQ96PX6 553 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-203ENST00000524627 SLC34A2O95436 690 aa16.5■□□□□ 0.23
SF3B2-203ENST00000524627 HSP90B1P14625 803 aaKnown RBP16.5■□□□□ 0.23
SF3B2-203ENST00000524627 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
SF3B2-203ENST00000524627 TRPA1O75762 1119 aa16.49■□□□□ 0.23
SF3B2-203ENST00000524627 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
SF3B2-203ENST00000524627 ZNF853P0CG23 659 aa16.49■□□□□ 0.23
SF3B2-203ENST00000524627 ANGEL2Q5VTE6 544 aaKnown RBP16.49■□□□□ 0.23
SF3B2-203ENST00000524627 RSBN1LQ6PCB5 846 aaPredicted RBP16.49■□□□□ 0.23
SF3B2-203ENST00000524627 CDCA5Q96FF9 252 aa16.49■□□□□ 0.23
SF3B2-203ENST00000524627 RNF186Q9NXI6 227 aa16.49■□□□□ 0.23
SF3B2-203ENST00000524627 SAGE1Q9NXZ1 904 aa16.49■□□□□ 0.23
SF3B2-203ENST00000524627 PDE8AO60658 829 aa16.48■□□□□ 0.23
SF3B2-203ENST00000524627 SLC10A3P09131 477 aa16.48■□□□□ 0.23
SF3B2-203ENST00000524627 ZNF280AP59817 542 aaPredicted RBP16.48■□□□□ 0.23
SF3B2-203ENST00000524627 SCARF1Q14162 830 aa16.48■□□□□ 0.23
SF3B2-203ENST00000524627 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
SF3B2-203ENST00000524627 AGBL3Q8NEM8 1001 aa16.48■□□□□ 0.23
SF3B2-203ENST00000524627 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
SF3B2-203ENST00000524627 CWC25Q9NXE8 425 aaPredicted RBP16.48■□□□□ 0.23
SF3B2-203ENST00000524627 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
SF3B2-203ENST00000524627 AKAP11Q9UKA4 1901 aa16.47■□□□□ 0.23
SF3B2-203ENST00000524627 XDHP47989 1333 aa16.46■□□□□ 0.23
SF3B2-203ENST00000524627 ZNF609O15014 1411 aa16.46■□□□□ 0.23
SF3B2-203ENST00000524627 APAF1O14727 1248 aa16.46■□□□□ 0.23
SF3B2-203ENST00000524627 GNAI1P63096 354 aa16.46■□□□□ 0.23
SF3B2-203ENST00000524627 CSRNP1Q96S65 589 aa16.46■□□□□ 0.23
SF3B2-203ENST00000524627 METTL22Q9BUU2 404 aaPredicted RBP16.46■□□□□ 0.23
SF3B2-203ENST00000524627 TNRC18O15417 2968 aaPredicted RBP16.45■□□□□ 0.22
SF3B2-203ENST00000524627 PSME4Q14997 1843 aa16.45■□□□□ 0.22
SF3B2-203ENST00000524627 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
SF3B2-203ENST00000524627 USP17L8P0C7I0 530 aa16.45■□□□□ 0.22
SF3B2-203ENST00000524627 CALD1Q05682 793 aaKnown RBP16.45■□□□□ 0.22
SF3B2-203ENST00000524627 RASAL3Q86YV0 1011 aa16.45■□□□□ 0.22
SF3B2-203ENST00000524627 C8orf58Q8NAV2 365 aa16.45■□□□□ 0.22
SF3B2-203ENST00000524627 MYOZ2Q9NPC6 264 aa16.45■□□□□ 0.22
SF3B2-203ENST00000524627 SCAF8Q9UPN6 1271 aaKnown RBP16.45■□□□□ 0.22
SF3B2-203ENST00000524627 USP17L3A6NCW0 530 aa16.44■□□□□ 0.22
SF3B2-203ENST00000524627 USP17L4A6NCW7 530 aa16.44■□□□□ 0.22
SF3B2-203ENST00000524627 ATP2B4P23634 1241 aa16.44■□□□□ 0.22
SF3B2-203ENST00000524627 USP17L1Q7RTZ2 530 aa16.44■□□□□ 0.22
SF3B2-203ENST00000524627 GMLQ99445 158 aa16.44■□□□□ 0.22
SF3B2-203ENST00000524627 MAP3K2Q9Y2U5 619 aa16.44■□□□□ 0.22
SF3B2-203ENST00000524627 WTIPA6NIX2 430 aaPredicted RBP16.43■□□□□ 0.22
SF3B2-203ENST00000524627 CTSWP56202 376 aa16.43■□□□□ 0.22
SF3B2-203ENST00000524627 SOX10P56693 466 aa16.43■□□□□ 0.22
SF3B2-203ENST00000524627 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
SF3B2-203ENST00000524627 PODNQ7Z5L7 613 aa16.43■□□□□ 0.22
SF3B2-203ENST00000524627 CDC5LQ99459 802 aaKnown RBP16.43■□□□□ 0.22
SF3B2-203ENST00000524627 PAPPA2Q9BXP8 1791 aa16.43■□□□□ 0.22
SF3B2-203ENST00000524627 PITPNM2Q9BZ72 1349 aa16.43■□□□□ 0.22
SF3B2-203ENST00000524627 FKBP1BP68106 108 aa16.42■□□□□ 0.22
SF3B2-203ENST00000524627 MOB2Q70IA6 237 aa16.42■□□□□ 0.22
SF3B2-203ENST00000524627 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
SF3B2-203ENST00000524627 PRAMEF18Q5VWM3 479 aa16.41■□□□□ 0.22
SF3B2-203ENST00000524627 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
SF3B2-203ENST00000524627 TSPYL6Q8N831 410 aa16.41■□□□□ 0.22
SF3B2-203ENST00000524627 FBXW7Q969H0 707 aa16.41■□□□□ 0.22
SF3B2-203ENST00000524627 MXD3Q9BW11 206 aa16.41■□□□□ 0.22
SF3B2-203ENST00000524627 GREM2Q9H772 168 aa16.41■□□□□ 0.22
SF3B2-203ENST00000524627 PRKRIP1Q9H875 184 aaPredicted RBP16.41■□□□□ 0.22
SF3B2-203ENST00000524627 MED23Q9ULK4 1368 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms