RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 DPF2Q92785 391 aa15.3■□□□□ 0.04
SDCBP-211ENST00000523441 POLLQ9UGP5 575 aa15.3■□□□□ 0.04
SDCBP-211ENST00000523441 MAPK8IP3Q9UPT6 1336 aa15.3■□□□□ 0.04
SDCBP-211ENST00000523441 RTL9Q8NET4 1388 aa15.29■□□□□ 0.04
SDCBP-211ENST00000523441 ERBB4Q15303 1308 aa15.29■□□□□ 0.04
SDCBP-211ENST00000523441 HSP90AB3PQ58FF7 597 aa15.29■□□□□ 0.04
SDCBP-211ENST00000523441 ANGEL2Q5VTE6 544 aaKnown RBP15.29■□□□□ 0.04
SDCBP-211ENST00000523441 LRP10Q7Z4F1 713 aa15.29■□□□□ 0.04
SDCBP-211ENST00000523441 RASAL3Q86YV0 1011 aa15.29■□□□□ 0.04
SDCBP-211ENST00000523441 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
SDCBP-211ENST00000523441 ATP5J2-PTCD1G3V325 749 aa15.28■□□□□ 0.04
SDCBP-211ENST00000523441 TCIRG1Q13488 830 aa15.28■□□□□ 0.04
SDCBP-211ENST00000523441 TTLL12Q14166 644 aaPredicted RBP15.28■□□□□ 0.04
SDCBP-211ENST00000523441 PRAMEF18Q5VWM3 479 aa15.28■□□□□ 0.04
SDCBP-211ENST00000523441 SCARF1Q14162 830 aa15.27■□□□□ 0.04
SDCBP-211ENST00000523441 LAS1LQ9Y4W2 734 aaKnown RBP15.27■□□□□ 0.04
SDCBP-211ENST00000523441 UBE2Q2LH0YL09 131 aa15.26■□□□□ 0.03
SDCBP-211ENST00000523441 RPS12P25398 132 aaKnown RBP15.26■□□□□ 0.03
SDCBP-211ENST00000523441 KRT24Q2M2I5 525 aa15.26■□□□□ 0.03
SDCBP-211ENST00000523441 ZNF296Q8WUU4 475 aaPredicted RBP15.26■□□□□ 0.03
SDCBP-211ENST00000523441 PLEKHF1Q96S99 279 aa15.26■□□□□ 0.03
SDCBP-211ENST00000523441 EYA3Q99504 573 aa15.26■□□□□ 0.03
SDCBP-211ENST00000523441 ZC3H12CQ9C0D7 883 aaKnown RBP15.26■□□□□ 0.03
SDCBP-211ENST00000523441 TMC4Q7Z404 712 aa15.25■□□□□ 0.03
SDCBP-211ENST00000523441 TBC1D16Q8TBP0 767 aa15.25■□□□□ 0.03
SDCBP-211ENST00000523441 CCDC85AQ96PX6 553 aaPredicted RBP15.25■□□□□ 0.03
SDCBP-211ENST00000523441 ANKIB1Q9P2G1 1089 aa15.25■□□□□ 0.03
SDCBP-211ENST00000523441 UFL1O94874 794 aa15.24■□□□□ 0.03
SDCBP-211ENST00000523441 RIPK4P57078 832 aa15.24■□□□□ 0.03
SDCBP-211ENST00000523441 PRKG1Q13976 671 aa15.24■□□□□ 0.03
SDCBP-211ENST00000523441 NEUROD2Q15784 382 aa15.24■□□□□ 0.03
SDCBP-211ENST00000523441 FBXW7Q969H0 707 aa15.24■□□□□ 0.03
SDCBP-211ENST00000523441 CHPF2Q9P2E5 772 aa15.24■□□□□ 0.03
SDCBP-211ENST00000523441 PAPPA2Q9BXP8 1791 aa15.24■□□□□ 0.03
SDCBP-211ENST00000523441 SPEF2Q9C093 1822 aa15.22■□□□□ 0.03
SDCBP-211ENST00000523441 JARID2Q92833 1246 aaPredicted RBP15.22■□□□□ 0.03
SDCBP-211ENST00000523441 SEC31BQ9NQW1 1179 aa15.22■□□□□ 0.03
SDCBP-211ENST00000523441 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
SDCBP-211ENST00000523441 VIL1P09327 827 aaKnown RBP15.21■□□□□ 0.03
SDCBP-211ENST00000523441 RPS8P62241 208 aaKnown RBP15.21■□□□□ 0.03
SDCBP-211ENST00000523441 MYOZ2Q9NPC6 264 aa15.21■□□□□ 0.03
SDCBP-211ENST00000523441 PSME4Q14997 1843 aa15.2■□□□□ 0.02
SDCBP-211ENST00000523441 GPR25O00155 361 aa15.2■□□□□ 0.02
SDCBP-211ENST00000523441 PKN2Q16513 984 aaKnown RBP15.2■□□□□ 0.02
SDCBP-211ENST00000523441 RSBN1LQ6PCB5 846 aaPredicted RBP15.2■□□□□ 0.02
SDCBP-211ENST00000523441 MXD3Q9BW11 206 aa15.2■□□□□ 0.02
SDCBP-211ENST00000523441 GGA1Q9UJY5 639 aa15.2■□□□□ 0.02
SDCBP-211ENST00000523441 USP17L8P0C7I0 530 aa15.19■□□□□ 0.02
SDCBP-211ENST00000523441 SF3B3Q15393 1217 aaKnown RBP15.19■□□□□ 0.02
SDCBP-211ENST00000523441 NBPF9Q3BBW0 867 aa15.19■□□□□ 0.02
SDCBP-211ENST00000523441 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
SDCBP-211ENST00000523441 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
SDCBP-211ENST00000523441 PNNQ9H307 717 aaKnown RBP15.19■□□□□ 0.02
SDCBP-211ENST00000523441 R3HDMLQ9H3Y0 253 aa15.19■□□□□ 0.02
SDCBP-211ENST00000523441 HDGFL1Q5TGJ6 251 aa15.18■□□□□ 0.02
SDCBP-211ENST00000523441 FBXO46Q6PJ61 603 aaPredicted RBP15.18■□□□□ 0.02
SDCBP-211ENST00000523441 CCDC146Q8IYE0 955 aa15.18■□□□□ 0.02
SDCBP-211ENST00000523441 PLBD2Q8NHP8 589 aa15.18■□□□□ 0.02
SDCBP-211ENST00000523441 ISCA1Q9BUE6 129 aa15.18■□□□□ 0.02
SDCBP-211ENST00000523441 FZD1Q9UP38 647 aa15.18■□□□□ 0.02
SDCBP-211ENST00000523441 FKTNO75072 461 aa15.17■□□□□ 0.02
SDCBP-211ENST00000523441 ZNF280AP59817 542 aaPredicted RBP15.17■□□□□ 0.02
SDCBP-211ENST00000523441 FKBP1BP68106 108 aa15.17■□□□□ 0.02
SDCBP-211ENST00000523441 AGBL3Q8NEM8 1001 aa15.17■□□□□ 0.02
SDCBP-211ENST00000523441 WTIPA6NIX2 430 aaPredicted RBP15.16■□□□□ 0.02
SDCBP-211ENST00000523441 SASH1O94885 1247 aa15.16■□□□□ 0.02
SDCBP-211ENST00000523441 POTEFA5A3E0 1075 aa15.15■□□□□ 0.02
SDCBP-211ENST00000523441 USP17L3A6NCW0 530 aa15.15■□□□□ 0.02
SDCBP-211ENST00000523441 USP17L4A6NCW7 530 aa15.15■□□□□ 0.02
SDCBP-211ENST00000523441 NF2P35240 595 aa15.15■□□□□ 0.02
SDCBP-211ENST00000523441 HABP4Q5JVS0 413 aaKnown RBP15.15■□□□□ 0.02
SDCBP-211ENST00000523441 USP17L1Q7RTZ2 530 aa15.15■□□□□ 0.02
SDCBP-211ENST00000523441 RIC3Q7Z5B4 369 aa15.15■□□□□ 0.02
SDCBP-211ENST00000523441 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
SDCBP-211ENST00000523441 TRIM17Q9Y577 477 aa15.15■□□□□ 0.02
SDCBP-211ENST00000523441 TMPOP42166 694 aaKnown RBP15.14■□□□□ 0.01
SDCBP-211ENST00000523441 PTPN12Q05209 780 aaKnown RBP15.14■□□□□ 0.01
SDCBP-211ENST00000523441 SREBF2Q12772 1141 aa15.14■□□□□ 0.01
SDCBP-211ENST00000523441 MYD88Q99836 296 aa15.14■□□□□ 0.01
SDCBP-211ENST00000523441 PODXL2Q9NZ53 605 aa15.14■□□□□ 0.01
SDCBP-211ENST00000523441 TM4SF4P48230 202 aa15.13■□□□□ 0.01
SDCBP-211ENST00000523441 LMOD3Q0VAK6 560 aa15.13■□□□□ 0.01
SDCBP-211ENST00000523441 DBF4Q9UBU7 674 aaPredicted RBP15.13■□□□□ 0.01
SDCBP-211ENST00000523441 ANGEL1Q9UNK9 670 aaKnown RBP15.13■□□□□ 0.01
SDCBP-211ENST00000523441 PITPNM2Q9BZ72 1349 aa15.13■□□□□ 0.01
SDCBP-211ENST00000523441 CCDC152Q4G0S7 254 aa15.12■□□□□ 0.01
SDCBP-211ENST00000523441 ANKRD18AQ8IVF6 992 aa15.12■□□□□ 0.01
SDCBP-211ENST00000523441 GMLQ99445 158 aa15.12■□□□□ 0.01
SDCBP-211ENST00000523441 XDHP47989 1333 aa15.12■□□□□ 0.01
SDCBP-211ENST00000523441 ARMC9Q7Z3E5 817 aa15.11■□□□□ 0.01
SDCBP-211ENST00000523441 OGFOD1Q8N543 542 aa15.11■□□□□ 0.01
SDCBP-211ENST00000523441 ZBTB38Q8NAP3 1195 aaPredicted RBP15.11■□□□□ 0.01
SDCBP-211ENST00000523441 PHAXQ9H814 394 aaKnown RBP15.11■□□□□ 0.01
SDCBP-211ENST00000523441 BABAM1Q9NWV8 329 aa15.11■□□□□ 0.01
SDCBP-211ENST00000523441 ELL2O00472 640 aaPredicted RBP15.1■□□□□ 0.01
SDCBP-211ENST00000523441 WNT10BO00744 389 aa15.1■□□□□ 0.01
SDCBP-211ENST00000523441 MYCP01106 439 aaPredicted RBP15.1■□□□□ 0.01
SDCBP-211ENST00000523441 ATP2B4P23634 1241 aa15.1■□□□□ 0.01
SDCBP-211ENST00000523441 GOLGA2Q08379 1002 aa15.1■□□□□ 0.01
SDCBP-211ENST00000523441 HYPKQ9NX55 129 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms