RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 POTEIP0CG38 1075 aa22.56■■□□□ 1.2
CLK4-211ENST00000522556 POTEJP0CG39 1038 aa22.56■■□□□ 1.2
CLK4-211ENST00000522556 VEGFAP15692 232 aaPredicted RBP22.56■■□□□ 1.2
CLK4-211ENST00000522556 ANKRD44Q8N8A2 993 aa22.56■■□□□ 1.2
CLK4-211ENST00000522556 L3MBTL3Q96JM7 780 aaPredicted RBP22.56■■□□□ 1.2
CLK4-211ENST00000522556 BICC1Q9H694 974 aaKnown RBP22.56■■□□□ 1.2
CLK4-211ENST00000522556 DBNDD1Q9H9R9 158 aa22.56■■□□□ 1.2
CLK4-211ENST00000522556 BSDC1Q9NW68 430 aaPredicted RBP22.56■■□□□ 1.2
CLK4-211ENST00000522556 GJA3Q9Y6H8 435 aa22.56■■□□□ 1.2
CLK4-211ENST00000522556 KIF16BQ96L93 1317 aa22.56■■□□□ 1.2
CLK4-211ENST00000522556 TOMM70O94826 608 aa22.55■■□□□ 1.2
CLK4-211ENST00000522556 CXCL9Q07325 125 aa22.55■■□□□ 1.2
CLK4-211ENST00000522556 DOK7Q18PE1 504 aa22.55■■□□□ 1.2
CLK4-211ENST00000522556 WASHC4Q2M389 1173 aa22.55■■□□□ 1.2
CLK4-211ENST00000522556 ANKRD18BA2A2Z9 1011 aa22.54■■□□□ 1.2
CLK4-211ENST00000522556 RAD17O75943 681 aa22.54■■□□□ 1.2
CLK4-211ENST00000522556 TRIM27P14373 513 aa22.54■■□□□ 1.2
CLK4-211ENST00000522556 IGHMBP2P38935 993 aaKnown RBP22.54■■□□□ 1.2
CLK4-211ENST00000522556 EIF6P56537 245 aaKnown RBP22.54■■□□□ 1.2
CLK4-211ENST00000522556 FRAT1Q92837 279 aaPredicted RBP22.54■■□□□ 1.2
CLK4-211ENST00000522556 API5Q9BZZ5 524 aaKnown RBP22.54■■□□□ 1.2
CLK4-211ENST00000522556 KCNQ5Q9NR82 932 aa22.54■■□□□ 1.2
CLK4-211ENST00000522556 GGA1Q9UJY5 639 aa22.54■■□□□ 1.2
CLK4-211ENST00000522556 ZNRF3Q9ULT6 936 aa22.54■■□□□ 1.2
CLK4-211ENST00000522556 XDHP47989 1333 aa22.54■■□□□ 1.2
CLK4-211ENST00000522556 ZNF646O15015 1829 aaPredicted RBP22.53■■□□□ 1.2
CLK4-211ENST00000522556 SNAP23O00161 211 aa22.53■■□□□ 1.2
CLK4-211ENST00000522556 KLRK1P26718 216 aa22.53■■□□□ 1.2
CLK4-211ENST00000522556 GPC2Q8N158 579 aa22.53■■□□□ 1.2
CLK4-211ENST00000522556 VPS33BQ9H267 617 aa22.53■■□□□ 1.2
CLK4-211ENST00000522556 ADAMTSL1Q8N6G6 1762 aa22.53■■□□□ 1.2
CLK4-211ENST00000522556 SCNN1DP51172 638 aa22.52■■□□□ 1.2
CLK4-211ENST00000522556 IFIT5Q13325 482 aaKnown RBP22.52■■□□□ 1.2
CLK4-211ENST00000522556 C16orf71Q8IYS4 520 aaPredicted RBP22.52■■□□□ 1.2
CLK4-211ENST00000522556 ECE2O60344 883 aa22.51■■□□□ 1.19
CLK4-211ENST00000522556 CCT4P50991 539 aaKnown RBP22.51■■□□□ 1.19
CLK4-211ENST00000522556 CHRNDQ07001 517 aa22.51■■□□□ 1.19
CLK4-211ENST00000522556 RABL6Q3YEC7 729 aaPredicted RBP22.51■■□□□ 1.19
CLK4-211ENST00000522556 HELBQ8NG08 1087 aaPredicted RBP22.51■■□□□ 1.19
CLK4-211ENST00000522556 RBM46Q8TBY0 533 aaKnown RBP22.51■■□□□ 1.19
CLK4-211ENST00000522556 CLUAP1Q96AJ1 413 aa22.51■■□□□ 1.19
CLK4-211ENST00000522556 MPHOSPH8Q99549 860 aa22.51■■□□□ 1.19
CLK4-211ENST00000522556 MEIS3Q99687 375 aa22.51■■□□□ 1.19
CLK4-211ENST00000522556 TAF1DQ9H5J8 278 aaPredicted RBP22.51■■□□□ 1.19
CLK4-211ENST00000522556 PSME4Q14997 1843 aa22.51■■□□□ 1.19
CLK4-211ENST00000522556 TXNRD3Q86VQ6 643 aa22.5■■□□□ 1.19
CLK4-211ENST00000522556 PUS3Q9BZE2 481 aaKnown RBP22.5■■□□□ 1.19
CLK4-211ENST00000522556 SHTN1A0MZ66 631 aa22.49■■□□□ 1.19
CLK4-211ENST00000522556 TAF5LO75529 589 aa22.49■■□□□ 1.19
CLK4-211ENST00000522556 ATF7IPQ6VMQ6 1270 aa22.49■■□□□ 1.19
CLK4-211ENST00000522556 KLHDC4Q8TBB5 520 aa22.49■■□□□ 1.19
CLK4-211ENST00000522556 ARHGAP45Q92619 1136 aa22.49■■□□□ 1.19
CLK4-211ENST00000522556 EYA3Q99504 573 aa22.49■■□□□ 1.19
CLK4-211ENST00000522556 ATP2B4P23634 1241 aa22.48■■□□□ 1.19
CLK4-211ENST00000522556 EPS15P42566 896 aa22.48■■□□□ 1.19
CLK4-211ENST00000522556 CCDC57Q2TAC2 916 aa22.48■■□□□ 1.19
CLK4-211ENST00000522556 INTS3Q68E01 1043 aaKnown RBP22.48■■□□□ 1.19
CLK4-211ENST00000522556 CIAPIN1Q6FI81 312 aa22.48■■□□□ 1.19
CLK4-211ENST00000522556 HACL1Q9UJ83 578 aa22.48■■□□□ 1.19
CLK4-211ENST00000522556 PSMD14O00487 310 aa22.47■■□□□ 1.19
CLK4-211ENST00000522556 EPHX2P34913 555 aa22.47■■□□□ 1.19
CLK4-211ENST00000522556 GMPSP49915 693 aaPredicted RBP22.47■■□□□ 1.19
CLK4-211ENST00000522556 ZC3H12CQ9C0D7 883 aaKnown RBP22.47■■□□□ 1.19
CLK4-211ENST00000522556 ZBTB12Q9Y330 459 aaPredicted RBP22.47■■□□□ 1.19
CLK4-211ENST00000522556 MED23Q9ULK4 1368 aa22.47■■□□□ 1.19
CLK4-211ENST00000522556 IQCA1LA6NCM1 817 aa22.46■■□□□ 1.19
CLK4-211ENST00000522556 TAF7LQ5H9L4 462 aa22.46■■□□□ 1.19
CLK4-211ENST00000522556 LRRFIP2Q9Y608 721 aaKnown RBP22.46■■□□□ 1.19
CLK4-211ENST00000522556 IRS2Q9Y4H2 1338 aa22.46■■□□□ 1.19
CLK4-211ENST00000522556 UBTFL1P0CB47 393 aaPredicted RBP22.45■■□□□ 1.18
CLK4-211ENST00000522556 RLBP1P12271 317 aa22.45■■□□□ 1.18
CLK4-211ENST00000522556 EAPPQ56P03 285 aaPredicted RBP22.45■■□□□ 1.18
CLK4-211ENST00000522556 LDHAL6AQ6ZMR3 332 aa22.45■■□□□ 1.18
CLK4-211ENST00000522556 TMEM57Q8N5G2 664 aa22.45■■□□□ 1.18
CLK4-211ENST00000522556 ZNF804BA4D1E1 1349 aa22.45■■□□□ 1.18
CLK4-211ENST00000522556 RFX5P48382 616 aaPredicted RBP22.44■■□□□ 1.18
CLK4-211ENST00000522556 LRRC24Q50LG9 513 aa22.44■■□□□ 1.18
CLK4-211ENST00000522556 ZKSCAN2Q63HK3 967 aa22.44■■□□□ 1.18
CLK4-211ENST00000522556 IPO8O15397 1037 aaKnown RBP22.43■■□□□ 1.18
CLK4-211ENST00000522556 PLIN1O60240 522 aa22.43■■□□□ 1.18
CLK4-211ENST00000522556 HSPA6P17066 643 aa22.43■■□□□ 1.18
CLK4-211ENST00000522556 SMC1BQ8NDV3 1235 aa22.43■■□□□ 1.18
CLK4-211ENST00000522556 ANKRD2Q9GZV1 360 aa22.43■■□□□ 1.18
CLK4-211ENST00000522556 CNNM1Q9NRU3 951 aa22.43■■□□□ 1.18
CLK4-211ENST00000522556 GPRC5DQ9NZD1 345 aa22.43■■□□□ 1.18
CLK4-211ENST00000522556 HTRA3P83110 453 aa22.42■■□□□ 1.18
CLK4-211ENST00000522556 LEMD3Q9Y2U8 911 aa22.42■■□□□ 1.18
CLK4-211ENST00000522556 LMOD1P29536 600 aaPredicted RBP22.41■■□□□ 1.18
CLK4-211ENST00000522556 FSTL1Q12841 308 aa22.41■■□□□ 1.18
CLK4-211ENST00000522556 RIPOR2Q9Y4F9 1068 aa22.41■■□□□ 1.18
CLK4-211ENST00000522556 G3V3G9 751 aa22.4■■□□□ 1.18
CLK4-211ENST00000522556 KCNJ4P48050 445 aa22.4■■□□□ 1.18
CLK4-211ENST00000522556 TNIP1Q15025 636 aa22.4■■□□□ 1.18
CLK4-211ENST00000522556 DCAF8Q5TAQ9 597 aa22.4■■□□□ 1.18
CLK4-211ENST00000522556 CHADLQ6NUI6 762 aa22.4■■□□□ 1.18
CLK4-211ENST00000522556 TRPM4Q8TD43 1214 aa22.4■■□□□ 1.18
CLK4-211ENST00000522556 MXD3Q9BW11 206 aa22.4■■□□□ 1.18
CLK4-211ENST00000522556 EGFRP00533 1210 aa22.39■■□□□ 1.17
CLK4-211ENST00000522556 LDHDQ86WU2 507 aa22.39■■□□□ 1.17
CLK4-211ENST00000522556 MAP1SQ66K74 1059 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms