RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 DBF4Q9UBU7 674 aaPredicted RBP16.06■□□□□ 0.16
BRF2-204ENST00000522539 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
BRF2-204ENST00000522539 C6orf229H3BNL8 230 aa16.05■□□□□ 0.16
BRF2-204ENST00000522539 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
BRF2-204ENST00000522539 KIF23Q02241 960 aaPredicted RBP16.05■□□□□ 0.16
BRF2-204ENST00000522539 HDGFL1Q5TGJ6 251 aa16.05■□□□□ 0.16
BRF2-204ENST00000522539 ZNF428Q96B54 188 aa16.05■□□□□ 0.16
BRF2-204ENST00000522539 TNRC18O15417 2968 aaPredicted RBP16.04■□□□□ 0.16
BRF2-204ENST00000522539 IRS4O14654 1257 aaPredicted RBP16.04■□□□□ 0.16
BRF2-204ENST00000522539 SLC10A3P09131 477 aa16.04■□□□□ 0.16
BRF2-204ENST00000522539 ZNF280AP59817 542 aaPredicted RBP16.04■□□□□ 0.16
BRF2-204ENST00000522539 DOK7Q18PE1 504 aa16.04■□□□□ 0.16
BRF2-204ENST00000522539 KIF4BQ2VIQ3 1234 aa16.04■□□□□ 0.16
BRF2-204ENST00000522539 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
BRF2-204ENST00000522539 RNF186Q9NXI6 227 aa16.04■□□□□ 0.16
BRF2-204ENST00000522539 ZNF157P51786 506 aaPredicted RBP16.03■□□□□ 0.16
BRF2-204ENST00000522539 GGA3Q9NZ52 723 aa16.03■□□□□ 0.16
BRF2-204ENST00000522539 ASTN2O75129 1339 aaPredicted RBP16.02■□□□□ 0.16
BRF2-204ENST00000522539 RBM26Q5T8P6 1007 aaKnown RBP16.02■□□□□ 0.16
BRF2-204ENST00000522539 SULF1Q8IWU6 871 aa16.02■□□□□ 0.16
BRF2-204ENST00000522539 ZBTB38Q8NAP3 1195 aaPredicted RBP16.02■□□□□ 0.16
BRF2-204ENST00000522539 CSRNP1Q96S65 589 aa16.02■□□□□ 0.16
BRF2-204ENST00000522539 PCDH10Q9P2E7 1040 aa16.02■□□□□ 0.16
BRF2-204ENST00000522539 PDE4DIPQ5VU43 2346 aa16.02■□□□□ 0.15
BRF2-204ENST00000522539 NEUROD2Q15784 382 aa16.01■□□□□ 0.15
BRF2-204ENST00000522539 AGBL3Q8NEM8 1001 aa16.01■□□□□ 0.15
BRF2-204ENST00000522539 RUNDC1Q96C34 613 aa16.01■□□□□ 0.15
BRF2-204ENST00000522539 CFAP44Q96MT7 982 aa16.01■□□□□ 0.15
BRF2-204ENST00000522539 GMLQ99445 158 aa16.01■□□□□ 0.15
BRF2-204ENST00000522539 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
BRF2-204ENST00000522539 SEC31BQ9NQW1 1179 aa16.01■□□□□ 0.15
BRF2-204ENST00000522539 PSME4Q14997 1843 aa16.01■□□□□ 0.15
BRF2-204ENST00000522539 TRPA1O75762 1119 aa16■□□□□ 0.15
BRF2-204ENST00000522539 FKBP1BP68106 108 aa16■□□□□ 0.15
BRF2-204ENST00000522539 RTL5Q5HYW3 569 aaPredicted RBP16■□□□□ 0.15
BRF2-204ENST00000522539 DUSP27Q5VZP5 1158 aa16■□□□□ 0.15
BRF2-204ENST00000522539 RSBN1LQ6PCB5 846 aaPredicted RBP16■□□□□ 0.15
BRF2-204ENST00000522539 RASAL3Q86YV0 1011 aa16■□□□□ 0.15
BRF2-204ENST00000522539 CCDC146Q8IYE0 955 aa16■□□□□ 0.15
BRF2-204ENST00000522539 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
BRF2-204ENST00000522539 CDCA5Q96FF9 252 aa16■□□□□ 0.15
BRF2-204ENST00000522539 PITPNM2Q9BZ72 1349 aa15.99■□□□□ 0.15
BRF2-204ENST00000522539 UFL1O94874 794 aa15.99■□□□□ 0.15
BRF2-204ENST00000522539 ZNF853P0CG23 659 aa15.99■□□□□ 0.15
BRF2-204ENST00000522539 GGA1Q9UJY5 639 aa15.99■□□□□ 0.15
BRF2-204ENST00000522539 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
BRF2-204ENST00000522539 AKAP11Q9UKA4 1901 aa15.99■□□□□ 0.15
BRF2-204ENST00000522539 MYBBP1AQ9BQG0 1328 aaKnown RBP15.98■□□□□ 0.15
BRF2-204ENST00000522539 PAPPA2Q9BXP8 1791 aa15.98■□□□□ 0.15
BRF2-204ENST00000522539 HSP90B1P14625 803 aaKnown RBP15.98■□□□□ 0.15
BRF2-204ENST00000522539 SCARF1Q14162 830 aa15.98■□□□□ 0.15
BRF2-204ENST00000522539 ANGEL2Q5VTE6 544 aaKnown RBP15.98■□□□□ 0.15
BRF2-204ENST00000522539 MBIPQ9NS73 344 aa15.98■□□□□ 0.15
BRF2-204ENST00000522539 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
BRF2-204ENST00000522539 PCCAP05165 728 aaPredicted RBP15.97■□□□□ 0.15
BRF2-204ENST00000522539 CCDC152Q4G0S7 254 aa15.97■□□□□ 0.15
BRF2-204ENST00000522539 CTU1Q7Z7A3 348 aaKnown RBP15.97■□□□□ 0.15
BRF2-204ENST00000522539 CCDC191Q8NCU4 936 aa15.97■□□□□ 0.15
BRF2-204ENST00000522539 XDHP47989 1333 aa15.96■□□□□ 0.15
BRF2-204ENST00000522539 PDE8AO60658 829 aa15.96■□□□□ 0.15
BRF2-204ENST00000522539 USP17L8P0C7I0 530 aa15.96■□□□□ 0.15
BRF2-204ENST00000522539 RIC3Q7Z5B4 369 aa15.96■□□□□ 0.15
BRF2-204ENST00000522539 PODNQ7Z5L7 613 aa15.96■□□□□ 0.15
BRF2-204ENST00000522539 PHAXQ9H814 394 aaKnown RBP15.96■□□□□ 0.15
BRF2-204ENST00000522539 MYOZ2Q9NPC6 264 aa15.96■□□□□ 0.15
BRF2-204ENST00000522539 SOX10P56693 466 aa15.95■□□□□ 0.14
BRF2-204ENST00000522539 GOLGA2Q08379 1002 aa15.95■□□□□ 0.14
BRF2-204ENST00000522539 ADAMTS8Q9UP79 889 aa15.95■□□□□ 0.14
BRF2-204ENST00000522539 USP17L3A6NCW0 530 aa15.94■□□□□ 0.14
BRF2-204ENST00000522539 USP17L4A6NCW7 530 aa15.94■□□□□ 0.14
BRF2-204ENST00000522539 USP17L1Q7RTZ2 530 aa15.94■□□□□ 0.14
BRF2-204ENST00000522539 MYD88Q99836 296 aa15.94■□□□□ 0.14
BRF2-204ENST00000522539 ZNF646O15015 1829 aaPredicted RBP15.94■□□□□ 0.14
BRF2-204ENST00000522539 MED23Q9ULK4 1368 aa15.93■□□□□ 0.14
BRF2-204ENST00000522539 G3V3G9 751 aa15.93■□□□□ 0.14
BRF2-204ENST00000522539 ATP2B4P23634 1241 aa15.93■□□□□ 0.14
BRF2-204ENST00000522539 NOM1Q5C9Z4 860 aaKnown RBP15.93■□□□□ 0.14
BRF2-204ENST00000522539 DCAF8Q5TAQ9 597 aa15.93■□□□□ 0.14
BRF2-204ENST00000522539 METTL22Q9BUU2 404 aaPredicted RBP15.93■□□□□ 0.14
BRF2-204ENST00000522539 IFT57Q9NWB7 429 aa15.93■□□□□ 0.14
BRF2-204ENST00000522539 CWC25Q9NXE8 425 aaPredicted RBP15.93■□□□□ 0.14
BRF2-204ENST00000522539 WDR43Q15061 677 aaKnown RBP eCLIP15.92■□□□□ 0.14
BRF2-204ENST00000522539 PKN2Q16513 984 aaKnown RBP15.92■□□□□ 0.14
BRF2-204ENST00000522539 ANKRD18AQ8IVF6 992 aa15.92■□□□□ 0.14
BRF2-204ENST00000522539 HPS5Q9UPZ3 1129 aa15.92■□□□□ 0.14
BRF2-204ENST00000522539 WTIPA6NIX2 430 aaPredicted RBP15.91■□□□□ 0.14
BRF2-204ENST00000522539 TM4SF4P48230 202 aa15.91■□□□□ 0.14
BRF2-204ENST00000522539 NBPF9Q3BBW0 867 aa15.91■□□□□ 0.14
BRF2-204ENST00000522539 DACT2Q5SW24 774 aa15.91■□□□□ 0.14
BRF2-204ENST00000522539 MOB2Q70IA6 237 aa15.91■□□□□ 0.14
BRF2-204ENST00000522539 BSDC1Q9NW68 430 aaPredicted RBP15.91■□□□□ 0.14
BRF2-204ENST00000522539 MMP14P50281 582 aa15.9■□□□□ 0.14
BRF2-204ENST00000522539 CTSWP56202 376 aa15.9■□□□□ 0.14
BRF2-204ENST00000522539 GNAI1P63096 354 aa15.9■□□□□ 0.14
BRF2-204ENST00000522539 PRPF38BQ5VTL8 546 aaKnown RBP15.9■□□□□ 0.14
BRF2-204ENST00000522539 ZNF296Q8WUU4 475 aaPredicted RBP15.9■□□□□ 0.14
BRF2-204ENST00000522539 JARID2Q92833 1246 aaPredicted RBP15.9■□□□□ 0.14
BRF2-204ENST00000522539 CCDC85AQ96PX6 553 aaPredicted RBP15.9■□□□□ 0.14
BRF2-204ENST00000522539 CFHR5Q9BXR6 569 aa15.9■□□□□ 0.14
BRF2-204ENST00000522539 MINPP1Q9UNW1 487 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms