RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 ZNRF3Q9ULT6 936 aa27.72■■■□□ 2.03
HOXA3-205ENST00000522456 MPNDQ8N594 471 aa27.71■■■□□ 2.03
HOXA3-205ENST00000522456 PRDM10Q9NQV6 1147 aa27.71■■■□□ 2.03
HOXA3-205ENST00000522456 GPRC5DQ9NZD1 345 aa27.71■■■□□ 2.03
HOXA3-205ENST00000522456 NOB1Q9ULX3 412 aaKnown RBP27.71■■■□□ 2.03
HOXA3-205ENST00000522456 ALDH1L1O75891 902 aa27.7■■■□□ 2.02
HOXA3-205ENST00000522456 CXCL9Q07325 125 aa27.7■■■□□ 2.02
HOXA3-205ENST00000522456 CCDC152Q4G0S7 254 aa27.7■■■□□ 2.02
HOXA3-205ENST00000522456 CCDC85AQ96PX6 553 aaPredicted RBP27.7■■■□□ 2.02
HOXA3-205ENST00000522456 WBP1LQ9NX94 342 aa27.7■■■□□ 2.02
HOXA3-205ENST00000522456 ADARB2Q9NS39 739 aaKnown RBP27.69■■■□□ 2.02
HOXA3-205ENST00000522456 C9orf78Q9NZ63 289 aaPredicted RBP27.69■■■□□ 2.02
HOXA3-205ENST00000522456 WDR33Q9C0J8 1336 aaKnown RBP27.68■■■□□ 2.02
HOXA3-205ENST00000522456 BRPF1P55201 1214 aaPredicted RBP27.68■■■□□ 2.02
HOXA3-205ENST00000522456 CTSWP56202 376 aa27.68■■■□□ 2.02
HOXA3-205ENST00000522456 FMR1Q06787 632 aaKnown RBP eCLIP27.68■■■□□ 2.02
HOXA3-205ENST00000522456 KIAA2012Q0VF49 1180 aa27.68■■■□□ 2.02
HOXA3-205ENST00000522456 LRRC37AA6NMS7 1700 aa27.67■■■□□ 2.02
HOXA3-205ENST00000522456 CASP7P55210 303 aa27.67■■■□□ 2.02
HOXA3-205ENST00000522456 CELF1Q92879 486 aaKnown RBP27.67■■■□□ 2.02
HOXA3-205ENST00000522456 GRM8O00222 908 aa27.66■■■□□ 2.02
HOXA3-205ENST00000522456 GMPSP49915 693 aaPredicted RBP27.66■■■□□ 2.02
HOXA3-205ENST00000522456 TTLL11Q8NHH1 800 aa27.66■■■□□ 2.02
HOXA3-205ENST00000522456 SEC31BQ9NQW1 1179 aa27.66■■■□□ 2.02
HOXA3-205ENST00000522456 TAF1P21675 1872 aa27.66■■■□□ 2.02
HOXA3-205ENST00000522456 DUOX1Q9NRD9 1551 aa27.65■■■□□ 2.02
HOXA3-205ENST00000522456 TRAF5O00463 557 aa27.65■■■□□ 2.02
HOXA3-205ENST00000522456 RPS8P62241 208 aaKnown RBP27.65■■■□□ 2.02
HOXA3-205ENST00000522456 CIAPIN1Q6FI81 312 aa27.65■■■□□ 2.02
HOXA3-205ENST00000522456 THSD7BQ9C0I4 1608 aa27.65■■■□□ 2.02
HOXA3-205ENST00000522456 TRPM7Q96QT4 1865 aa27.65■■■□□ 2.02
HOXA3-205ENST00000522456 MAP2K1Q02750 393 aaPredicted RBP27.64■■■□□ 2.02
HOXA3-205ENST00000522456 PLA2G12BQ9BX93 195 aa27.64■■■□□ 2.02
HOXA3-205ENST00000522456 API5Q9BZZ5 524 aaKnown RBP27.64■■■□□ 2.02
HOXA3-205ENST00000522456 KIF16BQ96L93 1317 aa27.64■■■□□ 2.01
HOXA3-205ENST00000522456 BCAR3O75815 825 aa27.63■■■□□ 2.01
HOXA3-205ENST00000522456 CST9Q5W186 159 aa27.63■■■□□ 2.01
HOXA3-205ENST00000522456 RAD17O75943 681 aa27.62■■■□□ 2.01
HOXA3-205ENST00000522456 LBX1P52954 281 aa27.62■■■□□ 2.01
HOXA3-205ENST00000522456 TNIP1Q15025 636 aa27.62■■■□□ 2.01
HOXA3-205ENST00000522456 PAXIP1Q6ZW49 1069 aaPredicted RBP27.62■■■□□ 2.01
HOXA3-205ENST00000522456 CAPNS2Q96L46 248 aa27.62■■■□□ 2.01
HOXA3-205ENST00000522456 MYH3P11055 1940 aa27.61■■■□□ 2.01
HOXA3-205ENST00000522456 ECE1P42892 770 aa27.61■■■□□ 2.01
HOXA3-205ENST00000522456 FRAT1Q92837 279 aaPredicted RBP27.61■■■□□ 2.01
HOXA3-205ENST00000522456 GREM2Q9H772 168 aa27.61■■■□□ 2.01
HOXA3-205ENST00000522456 IPO8O15397 1037 aaKnown RBP27.6■■■□□ 2.01
HOXA3-205ENST00000522456 HSPA8P11142 646 aaKnown RBP27.6■■■□□ 2.01
HOXA3-205ENST00000522456 ANKRD18AQ8IVF6 992 aa27.6■■■□□ 2.01
HOXA3-205ENST00000522456 ARHGAP45Q92619 1136 aa27.6■■■□□ 2.01
HOXA3-205ENST00000522456 TLL2Q9Y6L7 1015 aa27.6■■■□□ 2.01
HOXA3-205ENST00000522456 YDJCA8MPS7 323 aa27.59■■■□□ 2.01
HOXA3-205ENST00000522456 CSF1RP07333 972 aa27.59■■■□□ 2.01
HOXA3-205ENST00000522456 CCT4P50991 539 aaKnown RBP27.59■■■□□ 2.01
HOXA3-205ENST00000522456 CYP4F22Q6NT55 531 aa27.59■■■□□ 2.01
HOXA3-205ENST00000522456 CDC5LQ99459 802 aaKnown RBP27.59■■■□□ 2.01
HOXA3-205ENST00000522456 NBPF7P0C2Y1 421 aaPredicted RBP27.58■■■□□ 2.01
HOXA3-205ENST00000522456 FOXO4P98177 505 aa27.58■■■□□ 2.01
HOXA3-205ENST00000522456 GRM1Q13255 1194 aa27.58■■■□□ 2.01
HOXA3-205ENST00000522456 RTL9Q8NET4 1388 aa27.58■■■□□ 2.01
HOXA3-205ENST00000522456 COL4A1P02462 1669 aa27.57■■■□□ 2
HOXA3-205ENST00000522456 GLIS2Q9BZE0 524 aaPredicted RBP27.57■■■□□ 2
HOXA3-205ENST00000522456 PGAP2Q9UHJ9 254 aa27.57■■■□□ 2
HOXA3-205ENST00000522456 NSFL1CQ9UNZ2 370 aaKnown RBP27.57■■■□□ 2
HOXA3-205ENST00000522456 CHMP3Q9Y3E7 222 aa27.57■■■□□ 2
HOXA3-205ENST00000522456 ITGA6P23229 1130 aa27.56■■■□□ 2
HOXA3-205ENST00000522456 TRPM4Q8TD43 1214 aa27.56■■■□□ 2
HOXA3-205ENST00000522456 ZC3H15Q8WU90 426 aaKnown RBP27.56■■■□□ 2
HOXA3-205ENST00000522456 CELF2O95319 508 aaKnown RBP27.55■■■□□ 2
HOXA3-205ENST00000522456 HIRAP54198 1017 aaPredicted RBP27.55■■■□□ 2
HOXA3-205ENST00000522456 WASHC4Q2M389 1173 aa27.55■■■□□ 2
HOXA3-205ENST00000522456 FAM161AQ3B820 660 aa27.55■■■□□ 2
HOXA3-205ENST00000522456 EPHA10Q5JZY3 1008 aa27.55■■■□□ 2
HOXA3-205ENST00000522456 LMBR1LQ6UX01 489 aa27.55■■■□□ 2
HOXA3-205ENST00000522456 GPR101Q96P66 508 aaPredicted RBP27.55■■■□□ 2
HOXA3-205ENST00000522456 USP44Q9H0E7 712 aa27.55■■■□□ 2
HOXA3-205ENST00000522456 CNOT7Q9UIV1 285 aaKnown RBP27.55■■■□□ 2
HOXA3-205ENST00000522456 UTYO14607 1347 aa27.55■■■□□ 2
HOXA3-205ENST00000522456 GPSM2P81274 684 aa27.54■■■□□ 2
HOXA3-205ENST00000522456 SUCLG2Q96I99 432 aa27.54■■■□□ 2
HOXA3-205ENST00000522456 ANKRD18BA2A2Z9 1011 aa27.53■■■□□ 2
HOXA3-205ENST00000522456 H7C1D1 291 aa27.53■■■□□ 2
HOXA3-205ENST00000522456 IGHMBP2P38935 993 aaKnown RBP27.53■■■□□ 2
HOXA3-205ENST00000522456 ATF7IPQ6VMQ6 1270 aa27.53■■■□□ 2
HOXA3-205ENST00000522456 SAPCD2Q86UD0 394 aa27.53■■■□□ 2
HOXA3-205ENST00000522456 MICALL2Q8IY33 904 aa27.53■■■□□ 2
HOXA3-205ENST00000522456 BEGAINQ9BUH8 593 aa27.53■■■□□ 2
HOXA3-205ENST00000522456 DBNDD1Q9H9R9 158 aa27.53■■■□□ 2
HOXA3-205ENST00000522456 SHTN1A0MZ66 631 aa27.52■■■□□ 2
HOXA3-205ENST00000522456 C6orf229H3BNL8 230 aa27.52■■■□□ 2
HOXA3-205ENST00000522456 IFIT5Q13325 482 aaKnown RBP27.52■■■□□ 2
HOXA3-205ENST00000522456 EYA3Q99504 573 aa27.52■■■□□ 2
HOXA3-205ENST00000522456 BSDC1Q9NW68 430 aaPredicted RBP27.52■■■□□ 2
HOXA3-205ENST00000522456 PODXL2Q9NZ53 605 aa27.52■■■□□ 2
HOXA3-205ENST00000522456 ANKIB1Q9P2G1 1089 aa27.52■■■□□ 2
HOXA3-205ENST00000522456 RIMBP2O15034 1052 aa27.51■■□□□ 1.99
HOXA3-205ENST00000522456 TRIM27P14373 513 aa27.51■■□□□ 1.99
HOXA3-205ENST00000522456 ZKSCAN2Q63HK3 967 aa27.51■■□□□ 1.99
HOXA3-205ENST00000522456 CDC37L1Q7L3B6 337 aa27.51■■□□□ 1.99
HOXA3-205ENST00000522456 YTHDC1Q96MU7 727 aaKnown RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms