RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 C8orf34Q49A92 452 aa11.75□□□□□ -0.53
SHPRH-209ENST00000521977 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
SHPRH-209ENST00000521977 SLAIN1Q8ND83 568 aa11.75□□□□□ -0.53
SHPRH-209ENST00000521977 OTUD7AQ8TE49 926 aaPredicted RBP11.75□□□□□ -0.53
SHPRH-209ENST00000521977 FAM163AQ96GL9 167 aaPredicted RBP11.75□□□□□ -0.53
SHPRH-209ENST00000521977 BACH2Q9BYV9 841 aa11.75□□□□□ -0.53
SHPRH-209ENST00000521977 STAP2Q9UGK3 403 aa11.75□□□□□ -0.53
SHPRH-209ENST00000521977 RTL9Q8NET4 1388 aa11.75□□□□□ -0.53
SHPRH-209ENST00000521977 CIAO1O76071 339 aa11.74□□□□□ -0.53
SHPRH-209ENST00000521977 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
SHPRH-209ENST00000521977 BMP2KLQ5H9B9 411 aa11.74□□□□□ -0.53
SHPRH-209ENST00000521977 FLAD1Q8NFF5 587 aa11.74□□□□□ -0.53
SHPRH-209ENST00000521977 L3MBTL3Q96JM7 780 aaPredicted RBP11.74□□□□□ -0.53
SHPRH-209ENST00000521977 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
SHPRH-209ENST00000521977 NYXQ9GZU5 481 aa11.74□□□□□ -0.53
SHPRH-209ENST00000521977 IL1RAPL2Q9NP60 686 aa11.74□□□□□ -0.53
SHPRH-209ENST00000521977 CHMP3Q9Y3E7 222 aa11.74□□□□□ -0.53
SHPRH-209ENST00000521977 AOX1Q06278 1338 aa11.74□□□□□ -0.53
SHPRH-209ENST00000521977 LRP5O75197 1615 aa11.74□□□□□ -0.53
SHPRH-209ENST00000521977 HCLS1P14317 486 aaPredicted RBP11.73□□□□□ -0.53
SHPRH-209ENST00000521977 TM4SF1P30408 202 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 PDE1AP54750 535 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 IFIT5Q13325 482 aaKnown RBP11.73□□□□□ -0.53
SHPRH-209ENST00000521977 OS9Q13438 667 aaPredicted RBP11.73□□□□□ -0.53
SHPRH-209ENST00000521977 NFIXQ14938 502 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 EZH2Q15910 746 aaKnown RBP11.73□□□□□ -0.53
SHPRH-209ENST00000521977 QSER1Q2KHR3 1735 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 CCDC57Q2TAC2 916 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 CLASRPQ8N2M8 674 aaKnown RBP11.73□□□□□ -0.53
SHPRH-209ENST00000521977 CARMIL3Q8ND23 1372 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 SIL1Q9H173 461 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 GREM2Q9H772 168 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
SHPRH-209ENST00000521977 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.73□□□□□ -0.53
SHPRH-209ENST00000521977 RIC1Q4ADV7 1423 aa11.72□□□□□ -0.53
SHPRH-209ENST00000521977 ABCC12Q96J65 1359 aa11.72□□□□□ -0.53
SHPRH-209ENST00000521977 FAM177BA6PVY3 158 aa11.72□□□□□ -0.53
SHPRH-209ENST00000521977 EYA2O00167 538 aa11.72□□□□□ -0.53
SHPRH-209ENST00000521977 GSPT1P15170 499 aaKnown RBP11.72□□□□□ -0.53
SHPRH-209ENST00000521977 ITGA6P23229 1130 aa11.72□□□□□ -0.53
SHPRH-209ENST00000521977 IL15P40933 162 aaPredicted RBP11.72□□□□□ -0.53
SHPRH-209ENST00000521977 EN1Q05925 392 aaPredicted RBP11.72□□□□□ -0.53
SHPRH-209ENST00000521977 SF3B3Q15393 1217 aaKnown RBP11.72□□□□□ -0.53
SHPRH-209ENST00000521977 TTC22Q5TAA0 569 aa11.72□□□□□ -0.53
SHPRH-209ENST00000521977 BICDL1Q6ZP65 573 aa11.72□□□□□ -0.53
SHPRH-209ENST00000521977 PNPLA7Q6ZV29 1317 aa11.71□□□□□ -0.53
SHPRH-209ENST00000521977 ANKRD18BA2A2Z9 1011 aa11.71□□□□□ -0.53
SHPRH-209ENST00000521977 MX1P20591 662 aa11.71□□□□□ -0.53
SHPRH-209ENST00000521977 BAG6P46379 1132 aa11.71□□□□□ -0.53
SHPRH-209ENST00000521977 CCDC152Q4G0S7 254 aa11.71□□□□□ -0.53
SHPRH-209ENST00000521977 LRRC24Q50LG9 513 aa11.71□□□□□ -0.53
SHPRH-209ENST00000521977 TPTE2Q6XPS3 522 aa11.71□□□□□ -0.53
SHPRH-209ENST00000521977 NBPF5PQ86XG9 351 aaPredicted RBP11.71□□□□□ -0.53
SHPRH-209ENST00000521977 COL23A1Q86Y22 540 aaPredicted RBP11.71□□□□□ -0.53
SHPRH-209ENST00000521977 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
SHPRH-209ENST00000521977 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.53
SHPRH-209ENST00000521977 GPR108Q9NPR9 543 aa11.71□□□□□ -0.53
SHPRH-209ENST00000521977 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
SHPRH-209ENST00000521977 CASZ1Q86V15 1759 aa11.71□□□□□ -0.54
SHPRH-209ENST00000521977 TTC41PQ6P2S7 1318 aa11.7□□□□□ -0.54
SHPRH-209ENST00000521977 TFCP2Q12800 502 aa11.7□□□□□ -0.54
SHPRH-209ENST00000521977 SF3B2Q13435 895 aaKnown RBP11.7□□□□□ -0.54
SHPRH-209ENST00000521977 SLC15A2Q16348 729 aa11.7□□□□□ -0.54
SHPRH-209ENST00000521977 CCDC125Q86Z20 511 aa11.7□□□□□ -0.54
SHPRH-209ENST00000521977 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
SHPRH-209ENST00000521977 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
SHPRH-209ENST00000521977 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
SHPRH-209ENST00000521977 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
SHPRH-209ENST00000521977 RIPOR2Q9Y4F9 1068 aa11.7□□□□□ -0.54
SHPRH-209ENST00000521977 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
SHPRH-209ENST00000521977 POLRMTO00411 1230 aaKnown RBP11.69□□□□□ -0.54
SHPRH-209ENST00000521977 TNNI3KQ59H18 835 aa11.69□□□□□ -0.54
SHPRH-209ENST00000521977 C3orf67Q6ZVT6 689 aa11.69□□□□□ -0.54
SHPRH-209ENST00000521977 FPGT-TNNI3KV9GXZ4 949 aa11.69□□□□□ -0.54
SHPRH-209ENST00000521977 ZNF609O15014 1411 aa11.69□□□□□ -0.54
SHPRH-209ENST00000521977 SERPINB2P05120 415 aa11.68□□□□□ -0.54
SHPRH-209ENST00000521977 IFIT2P09913 472 aaKnown RBP11.68□□□□□ -0.54
SHPRH-209ENST00000521977 GTF2E1P29083 439 aaPredicted RBP11.68□□□□□ -0.54
SHPRH-209ENST00000521977 DDR1Q08345 913 aa11.68□□□□□ -0.54
SHPRH-209ENST00000521977 TAF7LQ5H9L4 462 aa11.68□□□□□ -0.54
SHPRH-209ENST00000521977 LDHAL6AQ6ZMR3 332 aa11.68□□□□□ -0.54
SHPRH-209ENST00000521977 DEFB132Q7Z7B7 95 aa11.68□□□□□ -0.54
SHPRH-209ENST00000521977 AACSQ86V21 672 aa11.68□□□□□ -0.54
SHPRH-209ENST00000521977 NLGN1Q8N2Q7 840 aa11.68□□□□□ -0.54
SHPRH-209ENST00000521977 STK32BQ9NY57 414 aa11.68□□□□□ -0.54
SHPRH-209ENST00000521977 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
SHPRH-209ENST00000521977 SDSP20132 328 aa11.67□□□□□ -0.54
SHPRH-209ENST00000521977 TSHZ3Q63HK5 1081 aa11.67□□□□□ -0.54
SHPRH-209ENST00000521977 PRR5LQ6MZQ0 368 aa11.67□□□□□ -0.54
SHPRH-209ENST00000521977 VGLL2Q8N8G2 317 aa11.67□□□□□ -0.54
SHPRH-209ENST00000521977 CNBD1Q8NA66 436 aa11.67□□□□□ -0.54
SHPRH-209ENST00000521977 NLRP3Q96P20 1036 aa11.67□□□□□ -0.54
SHPRH-209ENST00000521977 CCDC8Q9H0W5 538 aaPredicted RBP11.67□□□□□ -0.54
SHPRH-209ENST00000521977 SEC31BQ9NQW1 1179 aa11.67□□□□□ -0.54
SHPRH-209ENST00000521977 ECHDC1Q9NTX5 307 aa11.67□□□□□ -0.54
SHPRH-209ENST00000521977 TLR7Q9NYK1 1049 aaKnown RBP11.67□□□□□ -0.54
SHPRH-209ENST00000521977 CEP126Q9P2H0 1117 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms