RNA–Protein interactions for RNA: ENST00000521902.5

RUNX1T1-238, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-238	ENST00000521902	FAM89A	Q96GI7	184 aa		18.75	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	MAPK8IP3	Q9UPT6	1336 aa		18.74	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	ZNF280A	P59817	542 aa	Predicted RBP	18.74	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	RPS8	P62241	208 aa	Known RBP	18.74	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	SCARF1	Q14162	830 aa		18.74	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	ISCA1	Q9BUE6	129 aa		18.74	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.74	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	RIPK4	P57078	832 aa		18.73	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	ANGEL2	Q5VTE6	544 aa	Known RBP	18.73	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	ANKRD13D	Q6ZTN6	518 aa		18.72	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	AGBL3	Q8NEM8	1001 aa		18.72	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	PLBD2	Q8NHP8	589 aa		18.72	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	ZNF296	Q8WUU4	475 aa	Predicted RBP	18.72	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	PODXL2	Q9NZ53	605 aa		18.72	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	HDAC9	Q9UKV0	1011 aa		18.72	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	ANKRD36C	Q5JPF3	1778 aa		18.7	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	TBC1D8	O95759	1140 aa		18.7	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.7	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	ATP5J2-PTCD1	G3V325	749 aa		18.69	■□□□□ 0.58
RUNX1T1-238	ENST00000521902		G3V3G9	751 aa		18.69	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	IRS4	O14654	1257 aa	Predicted RBP	18.69	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	TM4SF4	P48230	202 aa		18.69	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	TRIM28	Q13263	835 aa	Known RBP	18.69	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	NOM1	Q5C9Z4	860 aa	Known RBP	18.69	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	DCAF8	Q5TAQ9	597 aa		18.69	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	GML	Q99445	158 aa		18.69	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	CHPF2	Q9P2E5	772 aa		18.69	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	USP17L8	P0C7I0	530 aa		18.68	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	KRT24	Q2M2I5	525 aa		18.68	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	MOB2	Q70IA6	237 aa		18.68	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	MYOZ2	Q9NPC6	264 aa		18.68	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	PITPNM2	Q9BZ72	1349 aa		18.68	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	UBE2Q2L	H0YL09	131 aa		18.67	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	GPR25	O00155	361 aa		18.67	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	CHL1	O00533	1208 aa		18.67	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	UFL1	O94874	794 aa		18.67	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	TMPO	P42166	694 aa	Known RBP	18.67	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	RTL5	Q5HYW3	569 aa	Predicted RBP	18.67	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	ANKIB1	Q9P2G1	1089 aa		18.67	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	GGA1	Q9UJY5	639 aa		18.67	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	ZNF609	O15014	1411 aa		18.66	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	LRRC37A	A6NMS7	1700 aa		18.66	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	LAMB2	P55268	1798 aa		18.66	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	LMOD3	Q0VAK6	560 aa		18.66	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	FBXO46	Q6PJ61	603 aa	Predicted RBP	18.66	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	SEC31B	Q9NQW1	1179 aa		18.66	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	DLG5	Q8TDM6	1919 aa		18.66	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	POLR2A	P24928	1970 aa	Known RBP	18.66	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	GCC1	Q96CN9	775 aa		18.65	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	DBF4	Q9UBU7	674 aa	Predicted RBP	18.65	■□□□□ 0.58
RUNX1T1-238	ENST00000521902	HDGFL1	Q5TGJ6	251 aa		18.64	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	PRAMEF18	Q5VWM3	479 aa		18.64	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	PODN	Q7Z5L7	613 aa		18.64	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	SCAF8	Q9UPN6	1271 aa	Known RBP	18.64	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	TAF1	P21675	1872 aa		18.64	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	USP17L3	A6NCW0	530 aa		18.63	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	USP17L4	A6NCW7	530 aa		18.63	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	HOXB7	P09629	217 aa		18.63	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	HSP90B1	P14625	803 aa	Known RBP	18.63	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	USP17L1	Q7RTZ2	530 aa		18.63	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.63	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	CFHR5	Q9BXR6	569 aa		18.63	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	HYPK	Q9NX55	129 aa		18.63	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	FKTN	O75072	461 aa		18.62	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	COL4A1	P02462	1669 aa		18.62	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	AKAP11	Q9UKA4	1901 aa		18.62	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	NBPF9	Q3BBW0	867 aa		18.61	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	SREBF2	Q12772	1141 aa		18.6	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	TTLL12	Q14166	644 aa	Predicted RBP	18.6	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	CCDC152	Q4G0S7	254 aa		18.6	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	R3HDML	Q9H3Y0	253 aa		18.6	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	LAS1L	Q9Y4W2	734 aa	Known RBP	18.6	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	XDH	P47989	1333 aa		18.59	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	ATP2B4	P23634	1241 aa		18.59	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	NF2	P35240	595 aa		18.59	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	MKRN3	Q13064	507 aa	Known RBP	18.59	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	PAPPA2	Q9BXP8	1791 aa		18.59	■□□□□ 0.57
RUNX1T1-238	ENST00000521902	WNT10B	O00744	389 aa		18.58	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	PDE8A	O60658	829 aa		18.58	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	PTPN12	Q05209	780 aa	Known RBP	18.58	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	NEUROD2	Q15784	382 aa		18.58	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	HABP4	Q5JVS0	413 aa	Known RBP	18.58	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	RIC3	Q7Z5B4	369 aa		18.58	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	OGFOD1	Q8N543	542 aa		18.58	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	SCN9A	Q15858	1988 aa		18.58	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	DDX60	Q8IY21	1712 aa	Known RBP	18.57	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	DACT2	Q5SW24	774 aa		18.57	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	ANKRD18A	Q8IVF6	992 aa		18.57	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	TRIM35	Q9UPQ4	493 aa		18.57	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	WTIP	A6NIX2	430 aa	Predicted RBP	18.56	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	ALDH1A1	P00352	501 aa		18.56	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	PCCA	P05165	728 aa	Predicted RBP	18.56	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	MMP14	P50281	582 aa		18.56	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	LDLRAD1	Q5T700	205 aa		18.56	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	DUSP27	Q5VZP5	1158 aa		18.56	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	INTS3	Q68E01	1043 aa	Known RBP	18.56	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	ARMC9	Q7Z3E5	817 aa		18.56	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	CCDC191	Q8NCU4	936 aa		18.56	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.56	■□□□□ 0.56
RUNX1T1-238	ENST00000521902	MXD3	Q9BW11	206 aa		18.56	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms