RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 REM2Q8IYK8 340 aaPredicted RBP10.65□□□□□ -0.7
CSMD1-209ENST00000520630 GRAPLQ8TC17 118 aaPredicted RBP10.65□□□□□ -0.7
CSMD1-209ENST00000520630 DCPSQ96C86 337 aaKnown RBP10.65□□□□□ -0.7
CSMD1-209ENST00000520630 ZNF609O15014 1411 aa10.65□□□□□ -0.7
CSMD1-209ENST00000520630 UNC80Q8N2C7 3258 aa10.64□□□□□ -0.71
CSMD1-209ENST00000520630 UBE2Q2LH0YL09 131 aa10.64□□□□□ -0.71
CSMD1-209ENST00000520630 RIMBP2O15034 1052 aa10.64□□□□□ -0.71
CSMD1-209ENST00000520630 ECE2O60344 883 aa10.64□□□□□ -0.71
CSMD1-209ENST00000520630 VIL1P09327 827 aaKnown RBP10.64□□□□□ -0.71
CSMD1-209ENST00000520630 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
CSMD1-209ENST00000520630 KIF6Q6ZMV9 814 aa10.64□□□□□ -0.71
CSMD1-209ENST00000520630 UTP14AQ9BVJ6 771 aaKnown RBP10.64□□□□□ -0.71
CSMD1-209ENST00000520630 CFHR5Q9BXR6 569 aa10.64□□□□□ -0.71
CSMD1-209ENST00000520630 HDAC9Q9UKV0 1011 aa10.64□□□□□ -0.71
CSMD1-209ENST00000520630 COLQQ9Y215 455 aaPredicted RBP10.64□□□□□ -0.71
CSMD1-209ENST00000520630 ANXA1P04083 346 aa10.63□□□□□ -0.71
CSMD1-209ENST00000520630 RPS12P25398 132 aaKnown RBP10.63□□□□□ -0.71
CSMD1-209ENST00000520630 ZNF280AP59817 542 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-209ENST00000520630 GPSM2P81274 684 aa10.63□□□□□ -0.71
CSMD1-209ENST00000520630 WASHC4Q2M389 1173 aa10.63□□□□□ -0.71
CSMD1-209ENST00000520630 PARP10Q53GL7 1025 aa10.63□□□□□ -0.71
CSMD1-209ENST00000520630 ANGEL2Q5VTE6 544 aaKnown RBP10.63□□□□□ -0.71
CSMD1-209ENST00000520630 PRAMEF18Q5VWM3 479 aa10.63□□□□□ -0.71
CSMD1-209ENST00000520630 NLRP10Q86W26 655 aa10.63□□□□□ -0.71
CSMD1-209ENST00000520630 CELF1Q92879 486 aaKnown RBP10.63□□□□□ -0.71
CSMD1-209ENST00000520630 ZNF428Q96B54 188 aa10.63□□□□□ -0.71
CSMD1-209ENST00000520630 GMLQ99445 158 aa10.63□□□□□ -0.71
CSMD1-209ENST00000520630 MGAMO43451 1857 aa10.63□□□□□ -0.71
CSMD1-209ENST00000520630 HTATSF1O43719 755 aaKnown RBP10.62□□□□□ -0.71
CSMD1-209ENST00000520630 EN2P19622 333 aaPredicted RBP10.62□□□□□ -0.71
CSMD1-209ENST00000520630 SCARF1Q14162 830 aa10.62□□□□□ -0.71
CSMD1-209ENST00000520630 SULF1Q8IWU6 871 aa10.62□□□□□ -0.71
CSMD1-209ENST00000520630 FKTNO75072 461 aa10.61□□□□□ -0.71
CSMD1-209ENST00000520630 MKRN3Q13064 507 aaKnown RBP10.61□□□□□ -0.71
CSMD1-209ENST00000520630 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
CSMD1-209ENST00000520630 DDX46Q7L014 1031 aaKnown RBP10.61□□□□□ -0.71
CSMD1-209ENST00000520630 RTF1Q92541 710 aaKnown RBP10.61□□□□□ -0.71
CSMD1-209ENST00000520630 OTUD5Q96G74 571 aa10.61□□□□□ -0.71
CSMD1-209ENST00000520630 DOCK3Q8IZD9 2030 aa10.6□□□□□ -0.71
CSMD1-209ENST00000520630 FKBP1BP68106 108 aa10.6□□□□□ -0.71
CSMD1-209ENST00000520630 OTOP1Q7RTM1 612 aa10.6□□□□□ -0.71
CSMD1-209ENST00000520630 TBC1D16Q8TBP0 767 aa10.6□□□□□ -0.71
CSMD1-209ENST00000520630 TMX4Q9H1E5 349 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-209ENST00000520630 NSFL1CQ9UNZ2 370 aaKnown RBP10.6□□□□□ -0.71
CSMD1-209ENST00000520630 ERBB4Q15303 1308 aa10.59□□□□□ -0.71
CSMD1-209ENST00000520630 PITPNM2Q9BZ72 1349 aa10.59□□□□□ -0.71
CSMD1-209ENST00000520630 PTPN12Q05209 780 aaKnown RBP10.59□□□□□ -0.71
CSMD1-209ENST00000520630 WTIPA6NIX2 430 aaPredicted RBP10.58□□□□□ -0.72
CSMD1-209ENST00000520630 C6orf229H3BNL8 230 aa10.58□□□□□ -0.72
CSMD1-209ENST00000520630 TCIRG1Q13488 830 aa10.58□□□□□ -0.72
CSMD1-209ENST00000520630 SF3B3Q15393 1217 aaKnown RBP10.58□□□□□ -0.72
CSMD1-209ENST00000520630 NBPF9Q3BBW0 867 aa10.58□□□□□ -0.72
CSMD1-209ENST00000520630 TMC4Q7Z404 712 aa10.58□□□□□ -0.72
CSMD1-209ENST00000520630 FZD1Q9UP38 647 aa10.58□□□□□ -0.72
CSMD1-209ENST00000520630 SH3TC1Q8TE82 1336 aa10.58□□□□□ -0.72
CSMD1-209ENST00000520630 SSC5DA1L4H1 1573 aa10.57□□□□□ -0.72
CSMD1-209ENST00000520630 DLL1O00548 723 aa10.57□□□□□ -0.72
CSMD1-209ENST00000520630 U2AF1L5P0DN76 240 aaPredicted RBP10.57□□□□□ -0.72
CSMD1-209ENST00000520630 U2AF1Q01081 240 aaKnown RBP eCLIP10.57□□□□□ -0.72
CSMD1-209ENST00000520630 DIEXFQ68CQ4 756 aaKnown RBP10.57□□□□□ -0.72
CSMD1-209ENST00000520630 RSBN1LQ6PCB5 846 aaPredicted RBP10.57□□□□□ -0.72
CSMD1-209ENST00000520630 COPS6Q7L5N1 327 aa10.57□□□□□ -0.72
CSMD1-209ENST00000520630 ARMC5Q96C12 935 aa10.57□□□□□ -0.72
CSMD1-209ENST00000520630 PLEKHF1Q96S99 279 aa10.57□□□□□ -0.72
CSMD1-209ENST00000520630 MYOZ2Q9NPC6 264 aa10.57□□□□□ -0.72
CSMD1-209ENST00000520630 TRMT112Q9UI30 125 aaKnown RBP10.57□□□□□ -0.72
CSMD1-209ENST00000520630 PTPN22Q9Y2R2 807 aa10.57□□□□□ -0.72
CSMD1-209ENST00000520630 TRIM17Q9Y577 477 aa10.57□□□□□ -0.72
CSMD1-209ENST00000520630 IGF2BP3O00425 579 aaKnown RBP eCLIP10.56□□□□□ -0.72
CSMD1-209ENST00000520630 DDX10Q13206 875 aaKnown RBP10.56□□□□□ -0.72
CSMD1-209ENST00000520630 LDLRAD1Q5T700 205 aa10.56□□□□□ -0.72
CSMD1-209ENST00000520630 INTS3Q68E01 1043 aaKnown RBP10.56□□□□□ -0.72
CSMD1-209ENST00000520630 AGBL3Q8NEM8 1001 aa10.56□□□□□ -0.72
CSMD1-209ENST00000520630 PODXL2Q9NZ53 605 aa10.56□□□□□ -0.72
CSMD1-209ENST00000520630 EYSQ5T1H1 3165 aa10.56□□□□□ -0.72
CSMD1-209ENST00000520630 ARAP2Q8WZ64 1704 aa10.55□□□□□ -0.72
CSMD1-209ENST00000520630 H0YGN5 161 aa10.55□□□□□ -0.72
CSMD1-209ENST00000520630 EIF2S2P20042 333 aaKnown RBP10.55□□□□□ -0.72
CSMD1-209ENST00000520630 SPRYD7Q5W111 196 aa10.55□□□□□ -0.72
CSMD1-209ENST00000520630 PNISRQ8TF01 805 aaKnown RBP10.55□□□□□ -0.72
CSMD1-209ENST00000520630 XAGE3Q8WTP9 111 aa10.55□□□□□ -0.72
CSMD1-209ENST00000520630 FAM89AQ96GI7 184 aa10.55□□□□□ -0.72
CSMD1-209ENST00000520630 MXD3Q9BW11 206 aa10.55□□□□□ -0.72
CSMD1-209ENST00000520630 SEC31BQ9NQW1 1179 aa10.55□□□□□ -0.72
CSMD1-209ENST00000520630 WNT10BO00744 389 aa10.54□□□□□ -0.72
CSMD1-209ENST00000520630 VCANP13611 3396 aa10.54□□□□□ -0.72
CSMD1-209ENST00000520630 PPP2R1AP30153 589 aa10.54□□□□□ -0.72
CSMD1-209ENST00000520630 AIMP1Q12904 312 aaKnown RBP10.54□□□□□ -0.72
CSMD1-209ENST00000520630 IFNL1Q8IU54 200 aa10.54□□□□□ -0.72
CSMD1-209ENST00000520630 CD99L2Q8TCZ2 262 aa10.54□□□□□ -0.72
CSMD1-209ENST00000520630 ISCA1Q9BUE6 129 aa10.54□□□□□ -0.72
CSMD1-209ENST00000520630 PRO3102Q9H379 93 aa10.54□□□□□ -0.72
CSMD1-209ENST00000520630 LAMA2P24043 3122 aaKnown RBP10.54□□□□□ -0.72
CSMD1-209ENST00000520630 USP17L8P0C7I0 530 aa10.53□□□□□ -0.72
CSMD1-209ENST00000520630 GJA5P36382 358 aa10.53□□□□□ -0.72
CSMD1-209ENST00000520630 RPS8P62241 208 aaKnown RBP10.53□□□□□ -0.72
CSMD1-209ENST00000520630 SREBF2Q12772 1141 aa10.53□□□□□ -0.72
CSMD1-209ENST00000520630 PRKG1Q13976 671 aa10.53□□□□□ -0.72
CSMD1-209ENST00000520630 NECTIN2Q92692 538 aa10.53□□□□□ -0.72
CSMD1-209ENST00000520630 ZNF333Q96JL9 665 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms