RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 TAOK3Q9H2K8 898 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 RRAGDQ9NQL2 400 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 PRAMEF22A3QJZ6 481 aa10.47□□□□□ -0.73
CTNNA1-223ENST00000520520 ESPNB1AK53 854 aa10.47□□□□□ -0.73
CTNNA1-223ENST00000520520 EPB41L2O43491 1005 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-223ENST00000520520 BAG4O95429 457 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-223ENST00000520520 GSPT1P15170 499 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-223ENST00000520520 PRPF40BQ6NWY9 871 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-223ENST00000520520 STK31Q9BXU1 1019 aa10.47□□□□□ -0.73
CTNNA1-223ENST00000520520 DDX49Q9Y6V7 483 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-223ENST00000520520 SLX4Q8IY92 1834 aa10.47□□□□□ -0.73
CTNNA1-223ENST00000520520 ELL2O00472 640 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 HTATSF1O43719 755 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 CAMTA2O94983 1202 aa10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 MBD3O95983 291 aa10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 GNAI3P08754 354 aa10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 IL6STP40189 918 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 NASPP49321 788 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 ZNF445P59923 1031 aa10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 EAPPQ56P03 285 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 NBPF5PQ86XG9 351 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 TEX13AQ9BXU3 409 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 SRCIN1Q9C0H9 1055 aa10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 OSBPL3Q9H4L5 887 aa10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 USP16Q9Y5T5 823 aa10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 AOX1Q06278 1338 aa10.46□□□□□ -0.73
CTNNA1-223ENST00000520520 FER1L6Q2WGJ9 1857 aa10.46□□□□□ -0.74
CTNNA1-223ENST00000520520 SIPA1L3O60292 1781 aaPredicted RBP10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 GNAI2P04899 355 aa10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 TPM2P07951 284 aa10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 ANAPC15P60006 121 aa10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 HS1BP3Q53T59 392 aa10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 OLFM4Q6UX06 510 aa10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 MCM10Q7L590 875 aa10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 CNKSR1Q969H4 720 aa10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 SYAP1Q96A49 352 aaPredicted RBP10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 USP26Q9BXU7 913 aa10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 PANK2Q9BZ23 570 aa10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 BABAM1Q9NWV8 329 aa10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 DICER1Q9UPY3 1922 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-223ENST00000520520 SRGNP10124 158 aa10.44□□□□□ -0.74
CTNNA1-223ENST00000520520 MSNP26038 577 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-223ENST00000520520 DCTN1Q14203 1278 aa10.44□□□□□ -0.74
CTNNA1-223ENST00000520520 KIF12Q96FN5 646 aa10.44□□□□□ -0.74
CTNNA1-223ENST00000520520 MASTLQ96GX5 879 aa10.44□□□□□ -0.74
CTNNA1-223ENST00000520520 PPP1R9BQ96SB3 815 aa10.44□□□□□ -0.74
CTNNA1-223ENST00000520520 ZNF277Q9NRM2 450 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-223ENST00000520520 TSPYL4Q9UJ04 414 aa10.44□□□□□ -0.74
CTNNA1-223ENST00000520520 CACNA1FO60840 1977 aa10.44□□□□□ -0.74
CTNNA1-223ENST00000520520 BCORQ6W2J9 1755 aa10.44□□□□□ -0.74
CTNNA1-223ENST00000520520 HAX1O00165 279 aa10.43□□□□□ -0.74
CTNNA1-223ENST00000520520 SDSP20132 328 aa10.43□□□□□ -0.74
CTNNA1-223ENST00000520520 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
CTNNA1-223ENST00000520520 STYK1Q6J9G0 422 aa10.43□□□□□ -0.74
CTNNA1-223ENST00000520520 NIP7Q9Y221 180 aaKnown RBP eCLIP10.43□□□□□ -0.74
CTNNA1-223ENST00000520520 ZNF541Q9H0D2 1346 aa10.42□□□□□ -0.74
CTNNA1-223ENST00000520520 CYP2E1P05181 493 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-223ENST00000520520 CCDC93Q567U6 631 aa10.42□□□□□ -0.74
CTNNA1-223ENST00000520520 CCDC30Q5VVM6 783 aa10.42□□□□□ -0.74
CTNNA1-223ENST00000520520 MCTP1Q6DN14 999 aa10.42□□□□□ -0.74
CTNNA1-223ENST00000520520 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-223ENST00000520520 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
CTNNA1-223ENST00000520520 PHF12Q96QT6 1004 aa10.42□□□□□ -0.74
CTNNA1-223ENST00000520520 MIS18AQ9NYP9 233 aa10.42□□□□□ -0.74
CTNNA1-223ENST00000520520 ZNF652Q9Y2D9 606 aa10.42□□□□□ -0.74
CTNNA1-223ENST00000520520 IQCA1LA6NCM1 817 aa10.41□□□□□ -0.74
CTNNA1-223ENST00000520520 CD2BP2O95400 341 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-223ENST00000520520 SNRPA1P09661 255 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-223ENST00000520520 NCLP19338 710 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-223ENST00000520520 SOGA3Q5TF21 947 aa10.41□□□□□ -0.74
CTNNA1-223ENST00000520520 MEIS3Q99687 375 aa10.41□□□□□ -0.74
CTNNA1-223ENST00000520520 LRRCC1Q9C099 1032 aa10.41□□□□□ -0.74
CTNNA1-223ENST00000520520 ARFGEF2Q9Y6D5 1785 aa10.41□□□□□ -0.74
CTNNA1-223ENST00000520520 CEMIPQ8WUJ3 1361 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 LTBP3Q9NS15 1303 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 FOXN1O15353 648 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 MAP3K13O43283 966 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 RRP9O43818 475 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 NPR1P16066 1061 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 MCM5P33992 734 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 GRM1Q13255 1194 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 HLFQ16534 295 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 TPTE2Q6XPS3 522 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 LDHDQ86WU2 507 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 ZNF579Q8NAF0 562 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 AIDAQ96BJ3 306 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 INTS4Q96HW7 963 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 TAF1DQ9H5J8 278 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 GJA3Q9Y6H8 435 aa10.4□□□□□ -0.74
CTNNA1-223ENST00000520520 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 RAB11FIP3O75154 756 aa10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 MX1P20591 662 aa10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 TERF1P54274 439 aa10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 PDE1AP54750 535 aa10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 FKBP4Q02790 459 aaKnown RBP eCLIP10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 ZSCAN23Q3MJ62 389 aa10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 MAP1SQ66K74 1059 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 PAXIP1Q6ZW49 1069 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms