RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 TAF7LQ5H9L4 462 aa14.86□□□□□ -0.03
HPS4-218ENST00000519774 MPNDQ8N594 471 aa14.86□□□□□ -0.03
HPS4-218ENST00000519774 DICER1Q9UPY3 1922 aaKnown RBP14.86□□□□□ -0.03
HPS4-218ENST00000519774 DUOX1Q9NRD9 1551 aa14.85□□□□□ -0.03
HPS4-218ENST00000519774 GPSM2P81274 684 aa14.85□□□□□ -0.03
HPS4-218ENST00000519774 RABL6Q3YEC7 729 aaPredicted RBP14.85□□□□□ -0.03
HPS4-218ENST00000519774 GRIPAP1Q4V328 841 aa14.85□□□□□ -0.03
HPS4-218ENST00000519774 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.85□□□□□ -0.03
HPS4-218ENST00000519774 ZNF594Q96JF6 807 aaPredicted RBP14.85□□□□□ -0.03
HPS4-218ENST00000519774 PSMD1Q99460 953 aa14.85□□□□□ -0.03
HPS4-218ENST00000519774 MPHOSPH8Q99549 860 aa14.85□□□□□ -0.03
HPS4-218ENST00000519774 NSFL1CQ9UNZ2 370 aaKnown RBP14.85□□□□□ -0.03
HPS4-218ENST00000519774 LTBP1Q14766 1721 aa14.84□□□□□ -0.03
HPS4-218ENST00000519774 ABCB7O75027 752 aa14.84□□□□□ -0.03
HPS4-218ENST00000519774 DSG3P32926 999 aa14.84□□□□□ -0.03
HPS4-218ENST00000519774 IARSP41252 1262 aaKnown RBP14.84□□□□□ -0.03
HPS4-218ENST00000519774 BSDC1Q9NW68 430 aaPredicted RBP14.84□□□□□ -0.03
HPS4-218ENST00000519774 ANKIB1Q9P2G1 1089 aa14.84□□□□□ -0.03
HPS4-218ENST00000519774 HDAC5Q9UQL6 1122 aa14.84□□□□□ -0.03
HPS4-218ENST00000519774 SUPT20HQ8NEM7 779 aa14.83□□□□□ -0.04
HPS4-218ENST00000519774 C6orf229H3BNL8 230 aa14.82□□□□□ -0.04
HPS4-218ENST00000519774 PPIP5K2O43314 1243 aa14.82□□□□□ -0.04
HPS4-218ENST00000519774 UFL1O94874 794 aa14.82□□□□□ -0.04
HPS4-218ENST00000519774 AOC3Q16853 763 aa14.82□□□□□ -0.04
HPS4-218ENST00000519774 C20orf194Q5TEA3 1177 aa14.82□□□□□ -0.04
HPS4-218ENST00000519774 LARGE2Q8N3Y3 721 aa14.82□□□□□ -0.04
HPS4-218ENST00000519774 MINPP1Q9UNW1 487 aa14.82□□□□□ -0.04
HPS4-218ENST00000519774 COG6Q9Y2V7 657 aa14.82□□□□□ -0.04
HPS4-218ENST00000519774 XDHP47989 1333 aa14.82□□□□□ -0.04
HPS4-218ENST00000519774 A0A1B0GUL6 1792 aa14.82□□□□□ -0.04
HPS4-218ENST00000519774 COL4A5P29400 1685 aa14.81□□□□□ -0.04
HPS4-218ENST00000519774 GNAI2P04899 355 aa14.81□□□□□ -0.04
HPS4-218ENST00000519774 MVPQ14764 893 aaKnown RBP14.81□□□□□ -0.04
HPS4-218ENST00000519774 LDHAL6AQ6ZMR3 332 aa14.81□□□□□ -0.04
HPS4-218ENST00000519774 ZNF526Q8TF50 670 aaPredicted RBP14.81□□□□□ -0.04
HPS4-218ENST00000519774 GPR101Q96P66 508 aaPredicted RBP14.81□□□□□ -0.04
HPS4-218ENST00000519774 RTFDC1Q9BY42 306 aaPredicted RBP14.81□□□□□ -0.04
HPS4-218ENST00000519774 C1orf115Q9H7X2 142 aa14.81□□□□□ -0.04
HPS4-218ENST00000519774 CNNM1Q9NRU3 951 aa14.81□□□□□ -0.04
HPS4-218ENST00000519774 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
HPS4-218ENST00000519774 UTRNP46939 3433 aa14.8□□□□□ -0.04
HPS4-218ENST00000519774 RRP1P56182 461 aaKnown RBP14.8□□□□□ -0.04
HPS4-218ENST00000519774 CHRNDQ07001 517 aa14.8□□□□□ -0.04
HPS4-218ENST00000519774 HELBQ8NG08 1087 aaPredicted RBP14.8□□□□□ -0.04
HPS4-218ENST00000519774 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
HPS4-218ENST00000519774 TBC1D16Q8TBP0 767 aa14.8□□□□□ -0.04
HPS4-218ENST00000519774 JDP2Q8WYK2 163 aa14.8□□□□□ -0.04
HPS4-218ENST00000519774 PUS3Q9BZE2 481 aaKnown RBP14.8□□□□□ -0.04
HPS4-218ENST00000519774 PODXL2Q9NZ53 605 aa14.8□□□□□ -0.04
HPS4-218ENST00000519774 POLLQ9UGP5 575 aa14.8□□□□□ -0.04
HPS4-218ENST00000519774 RIMBP2O15034 1052 aa14.79□□□□□ -0.04
HPS4-218ENST00000519774 POLA2Q14181 598 aa14.79□□□□□ -0.04
HPS4-218ENST00000519774 PDE3AQ14432 1141 aa14.79□□□□□ -0.04
HPS4-218ENST00000519774 NIM1KQ8IY84 436 aa14.79□□□□□ -0.04
HPS4-218ENST00000519774 EYA3Q99504 573 aa14.79□□□□□ -0.04
HPS4-218ENST00000519774 ANKRD2Q9GZV1 360 aa14.79□□□□□ -0.04
HPS4-218ENST00000519774 ZC3H4Q9UPT8 1303 aaKnown RBP14.78□□□□□ -0.04
HPS4-218ENST00000519774 ZBTB7BO15156 539 aaPredicted RBP14.78□□□□□ -0.04
HPS4-218ENST00000519774 SRGAP3O43295 1099 aa14.78□□□□□ -0.04
HPS4-218ENST00000519774 TAF5LO75529 589 aa14.78□□□□□ -0.04
HPS4-218ENST00000519774 ATP2B4P23634 1241 aa14.78□□□□□ -0.04
HPS4-218ENST00000519774 KCNJ4P48050 445 aa14.78□□□□□ -0.04
HPS4-218ENST00000519774 RFX5P48382 616 aaPredicted RBP14.78□□□□□ -0.04
HPS4-218ENST00000519774 KIAA2012Q0VF49 1180 aa14.78□□□□□ -0.04
HPS4-218ENST00000519774 WASHC4Q2M389 1173 aa14.78□□□□□ -0.04
HPS4-218ENST00000519774 DDX19BQ9UMR2 479 aa14.78□□□□□ -0.04
HPS4-218ENST00000519774 ZNF541Q9H0D2 1346 aa14.77□□□□□ -0.04
HPS4-218ENST00000519774 WTIPA6NIX2 430 aaPredicted RBP14.77□□□□□ -0.05
HPS4-218ENST00000519774 LRRC24Q50LG9 513 aa14.77□□□□□ -0.05
HPS4-218ENST00000519774 ZNF784Q8NCA9 323 aaPredicted RBP14.77□□□□□ -0.05
HPS4-218ENST00000519774 SIL1Q9H173 461 aa14.77□□□□□ -0.05
HPS4-218ENST00000519774 VPS33BQ9H267 617 aa14.77□□□□□ -0.05
HPS4-218ENST00000519774 PA2G4Q9UQ80 394 aaKnown RBP14.77□□□□□ -0.05
HPS4-218ENST00000519774 ZNF804BA4D1E1 1349 aa14.76□□□□□ -0.05
HPS4-218ENST00000519774 SNAP23O00161 211 aa14.76□□□□□ -0.05
HPS4-218ENST00000519774 PTPN12Q05209 780 aaKnown RBP14.76□□□□□ -0.05
HPS4-218ENST00000519774 MTX1Q13505 466 aa14.76□□□□□ -0.05
HPS4-218ENST00000519774 ZC3H12CQ9C0D7 883 aaKnown RBP14.76□□□□□ -0.05
HPS4-218ENST00000519774 DBNDD1Q9H9R9 158 aa14.76□□□□□ -0.05
HPS4-218ENST00000519774 LEMD3Q9Y2U8 911 aa14.76□□□□□ -0.05
HPS4-218ENST00000519774 MROH5Q6ZUA9 1318 aa14.75□□□□□ -0.05
HPS4-218ENST00000519774 PNMA6EA0A0J9YXQ4 647 aa14.75□□□□□ -0.05
HPS4-218ENST00000519774 G3V3G9 751 aa14.75□□□□□ -0.05
HPS4-218ENST00000519774 EYA2O00167 538 aa14.75□□□□□ -0.05
HPS4-218ENST00000519774 EIF6P56537 245 aaKnown RBP14.75□□□□□ -0.05
HPS4-218ENST00000519774 DOK7Q18PE1 504 aa14.75□□□□□ -0.05
HPS4-218ENST00000519774 METTL24Q5JXM2 366 aa14.75□□□□□ -0.05
HPS4-218ENST00000519774 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
HPS4-218ENST00000519774 RIPOR2Q9Y4F9 1068 aa14.75□□□□□ -0.05
HPS4-218ENST00000519774 MED23Q9ULK4 1368 aa14.74□□□□□ -0.05
HPS4-218ENST00000519774 KDM2BQ8NHM5 1336 aa14.74□□□□□ -0.05
HPS4-218ENST00000519774 FZD9O00144 591 aa14.74□□□□□ -0.05
HPS4-218ENST00000519774 ECE2O60344 883 aa14.74□□□□□ -0.05
HPS4-218ENST00000519774 KLRK1P26718 216 aa14.74□□□□□ -0.05
HPS4-218ENST00000519774 DPY19L2Q6NUT2 758 aa14.74□□□□□ -0.05
HPS4-218ENST00000519774 CHMP4BQ9H444 224 aaKnown RBP14.74□□□□□ -0.05
HPS4-218ENST00000519774 GPBP1L1Q9HC44 474 aaPredicted RBP14.74□□□□□ -0.05
HPS4-218ENST00000519774 ZNRF3Q9ULT6 936 aa14.74□□□□□ -0.05
HPS4-218ENST00000519774 GLTPD2A6NH11 291 aa14.73□□□□□ -0.05
HPS4-218ENST00000519774 DDNO94850 711 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms