RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-206ENST00000519115 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
SDCBP-206ENST00000519115 RTL9Q8NET4 1388 aa9.51□□□□□ -0.89
SDCBP-206ENST00000519115 FOXO4P98177 505 aa9.51□□□□□ -0.89
SDCBP-206ENST00000519115 MVPQ14764 893 aaKnown RBP9.51□□□□□ -0.89
SDCBP-206ENST00000519115 AOC3Q16853 763 aa9.51□□□□□ -0.89
SDCBP-206ENST00000519115 DPP8Q6V1X1 898 aaPredicted RBP9.51□□□□□ -0.89
SDCBP-206ENST00000519115 TMC4Q7Z404 712 aa9.51□□□□□ -0.89
SDCBP-206ENST00000519115 ANKRD18AQ8IVF6 992 aa9.51□□□□□ -0.89
SDCBP-206ENST00000519115 FTSJ3Q8IY81 847 aaKnown RBP9.51□□□□□ -0.89
SDCBP-206ENST00000519115 MPNDQ8N594 471 aa9.51□□□□□ -0.89
SDCBP-206ENST00000519115 SUCLG2Q96I99 432 aa9.51□□□□□ -0.89
SDCBP-206ENST00000519115 CDC5LQ99459 802 aaKnown RBP9.51□□□□□ -0.89
SDCBP-206ENST00000519115 ZC3H4Q9UPT8 1303 aaKnown RBP9.51□□□□□ -0.89
SDCBP-206ENST00000519115 SCN9AQ15858 1988 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 PPIP5K2O43314 1243 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 PLIN1O60240 522 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 ITGA6P23229 1130 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 GPSM2P81274 684 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 GRIPAP1Q4V328 841 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 LMBR1LQ6UX01 489 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 CLUAP1Q96AJ1 413 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 GPR101Q96P66 508 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-206ENST00000519115 NMRK2Q9NPI5 230 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 NSFL1CQ9UNZ2 370 aaKnown RBP9.5□□□□□ -0.89
SDCBP-206ENST00000519115 HDAC5Q9UQL6 1122 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 WDR90Q96KV7 1748 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 UTYO14607 1347 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 ZNF541Q9H0D2 1346 aa9.5□□□□□ -0.89
SDCBP-206ENST00000519115 CSF1RP07333 972 aa9.49□□□□□ -0.89
SDCBP-206ENST00000519115 CCT4P50991 539 aaKnown RBP9.49□□□□□ -0.89
SDCBP-206ENST00000519115 SUPT20HQ8NEM7 779 aa9.49□□□□□ -0.89
SDCBP-206ENST00000519115 EXOC6Q8TAG9 804 aa9.49□□□□□ -0.89
SDCBP-206ENST00000519115 KAZALD1Q96I82 304 aa9.49□□□□□ -0.89
SDCBP-206ENST00000519115 RTFDC1Q9BY42 306 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-206ENST00000519115 USP44Q9H0E7 712 aa9.49□□□□□ -0.89
SDCBP-206ENST00000519115 BICC1Q9H694 974 aaKnown RBP9.49□□□□□ -0.89
SDCBP-206ENST00000519115 ANKIB1Q9P2G1 1089 aa9.49□□□□□ -0.89
SDCBP-206ENST00000519115 KDM2BQ8NHM5 1336 aa9.49□□□□□ -0.89
SDCBP-206ENST00000519115 SCN4AP35499 1836 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 PSME4Q14997 1843 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 ANKRD18BA2A2Z9 1011 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 GLTPD2A6NH11 291 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 C6orf229H3BNL8 230 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 RIMBP2O15034 1052 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 UFL1O94874 794 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 IGHMBP2P38935 993 aaKnown RBP9.48□□□□□ -0.89
SDCBP-206ENST00000519115 IFIT5Q13325 482 aaKnown RBP9.48□□□□□ -0.89
SDCBP-206ENST00000519115 NIM1KQ8IY84 436 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 ANKRD44Q8N8A2 993 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 JDP2Q8WYK2 163 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 ZNF594Q96JF6 807 aaPredicted RBP9.48□□□□□ -0.89
SDCBP-206ENST00000519115 CCDC136Q96JN2 1154 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 MEIS3Q99687 375 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 ZBTB40Q9NUA8 1239 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 POLLQ9UGP5 575 aa9.48□□□□□ -0.89
SDCBP-206ENST00000519115 WTIPA6NIX2 430 aaPredicted RBP9.47□□□□□ -0.89
SDCBP-206ENST00000519115 KIF3CO14782 793 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 ZBTB7BO15156 539 aaPredicted RBP9.47□□□□□ -0.89
SDCBP-206ENST00000519115 DDNO94850 711 aaPredicted RBP9.47□□□□□ -0.89
SDCBP-206ENST00000519115 UBTFL1P0CB47 393 aaPredicted RBP9.47□□□□□ -0.89
SDCBP-206ENST00000519115 KIAA2012Q0VF49 1180 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 TAF7LQ5H9L4 462 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 C20orf194Q5TEA3 1177 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 TBC1D16Q8TBP0 767 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 MPHOSPH8Q99549 860 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 RRAGCQ9HB90 399 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 BSDC1Q9NW68 430 aaPredicted RBP9.47□□□□□ -0.89
SDCBP-206ENST00000519115 GGA1Q9UJY5 639 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 MINPP1Q9UNW1 487 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 XDHP47989 1333 aa9.47□□□□□ -0.89
SDCBP-206ENST00000519115 FZD9O00144 591 aa9.46□□□□□ -0.9
SDCBP-206ENST00000519115 RLBP1P12271 317 aa9.46□□□□□ -0.9
SDCBP-206ENST00000519115 WASHC4Q2M389 1173 aa9.46□□□□□ -0.9
SDCBP-206ENST00000519115 CCDC57Q2TAC2 916 aa9.46□□□□□ -0.9
SDCBP-206ENST00000519115 RABL6Q3YEC7 729 aaPredicted RBP9.46□□□□□ -0.9
SDCBP-206ENST00000519115 DPY19L2Q6NUT2 758 aa9.46□□□□□ -0.9
SDCBP-206ENST00000519115 CENPQQ7L2Z9 268 aaPredicted RBP9.46□□□□□ -0.9
SDCBP-206ENST00000519115 TMEM57Q8N5G2 664 aa9.46□□□□□ -0.9
SDCBP-206ENST00000519115 HELBQ8NG08 1087 aaPredicted RBP9.46□□□□□ -0.9
SDCBP-206ENST00000519115 PANK1Q8TE04 598 aa9.46□□□□□ -0.9
SDCBP-206ENST00000519115 RWDD1Q9H446 243 aaPredicted RBP9.46□□□□□ -0.9
SDCBP-206ENST00000519115 DBNDD1Q9H9R9 158 aa9.46□□□□□ -0.9
SDCBP-206ENST00000519115 PODXL2Q9NZ53 605 aa9.46□□□□□ -0.9
SDCBP-206ENST00000519115 LRRFIP2Q9Y608 721 aaKnown RBP9.46□□□□□ -0.9
SDCBP-206ENST00000519115 GJA3Q9Y6H8 435 aa9.46□□□□□ -0.9
SDCBP-206ENST00000519115 ZNF646O15015 1829 aaPredicted RBP9.46□□□□□ -0.9
SDCBP-206ENST00000519115 YDJCA8MPS7 323 aa9.45□□□□□ -0.9
SDCBP-206ENST00000519115 EIF6P56537 245 aaKnown RBP9.45□□□□□ -0.9
SDCBP-206ENST00000519115 CHRNDQ07001 517 aa9.45□□□□□ -0.9
SDCBP-206ENST00000519115 HDAC1Q13547 482 aaPredicted RBP9.45□□□□□ -0.9
SDCBP-206ENST00000519115 DOK7Q18PE1 504 aa9.45□□□□□ -0.9
SDCBP-206ENST00000519115 LDHAL6AQ6ZMR3 332 aa9.45□□□□□ -0.9
SDCBP-206ENST00000519115 RPAP2Q8IXW5 612 aaPredicted RBP9.45□□□□□ -0.9
SDCBP-206ENST00000519115 EYA3Q99504 573 aa9.45□□□□□ -0.9
SDCBP-206ENST00000519115 CNNM1Q9NRU3 951 aa9.45□□□□□ -0.9
SDCBP-206ENST00000519115 COG6Q9Y2V7 657 aa9.45□□□□□ -0.9
SDCBP-206ENST00000519115 MYH13Q9UKX3 1938 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms