RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 GRAPLQ8TC17 118 aaPredicted RBP13.6□□□□□ -0.23
PDGFRB-203ENST00000517660 ZC3H15Q8WU90 426 aaKnown RBP13.6□□□□□ -0.23
PDGFRB-203ENST00000517660 ZNF428Q96B54 188 aa13.6□□□□□ -0.23
PDGFRB-203ENST00000517660 VPS33BQ9H267 617 aa13.6□□□□□ -0.23
PDGFRB-203ENST00000517660 IRS4O14654 1257 aaPredicted RBP13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 HSP90B1P14625 803 aaKnown RBP13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 AOC3Q16853 763 aa13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 TWISTNBQ3B726 338 aaPredicted RBP13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 TMC4Q7Z404 712 aa13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 NIM1KQ8IY84 436 aa13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 ZBTB38Q8NAP3 1195 aaPredicted RBP13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 SUPT20HQ8NEM7 779 aa13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 MYD88Q99836 296 aa13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 STK31Q9BXU1 1019 aa13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 CENPFP49454 3210 aa13.59□□□□□ -0.23
PDGFRB-203ENST00000517660 SLC10A3P09131 477 aa13.58□□□□□ -0.24
PDGFRB-203ENST00000517660 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
PDGFRB-203ENST00000517660 DPP8Q6V1X1 898 aaPredicted RBP13.58□□□□□ -0.24
PDGFRB-203ENST00000517660 KSR2Q6VAB6 950 aa13.58□□□□□ -0.24
PDGFRB-203ENST00000517660 MPNDQ8N594 471 aa13.58□□□□□ -0.24
PDGFRB-203ENST00000517660 CCDC191Q8NCU4 936 aa13.58□□□□□ -0.24
PDGFRB-203ENST00000517660 METTL22Q9BUU2 404 aaPredicted RBP13.58□□□□□ -0.24
PDGFRB-203ENST00000517660 RTFDC1Q9BY42 306 aaPredicted RBP13.58□□□□□ -0.24
PDGFRB-203ENST00000517660 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
PDGFRB-203ENST00000517660 PPIP5K2O43314 1243 aa13.57□□□□□ -0.24
PDGFRB-203ENST00000517660 FAM9BQ8IZU0 186 aa13.57□□□□□ -0.24
PDGFRB-203ENST00000517660 GBA2Q9HCG7 927 aaPredicted RBP13.57□□□□□ -0.24
PDGFRB-203ENST00000517660 CWC25Q9NXE8 425 aaPredicted RBP13.57□□□□□ -0.24
PDGFRB-203ENST00000517660 A0A0C4DFX4 3053 aa13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 PI4KAP2A4QPH2 592 aa13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 EGFRP00533 1210 aa13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 PCCAP05165 728 aaPredicted RBP13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 ZNF157P51786 506 aaPredicted RBP13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 PI4KAP1Q8N8J0 262 aa13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 ZNF296Q8WUU4 475 aaPredicted RBP13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 ZNRF3Q9ULT6 936 aa13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
PDGFRB-203ENST00000517660 POTEFA5A3E0 1075 aa13.55□□□□□ -0.24
PDGFRB-203ENST00000517660 ADM5C9JUS6 153 aa13.55□□□□□ -0.24
PDGFRB-203ENST00000517660 DLL1O00548 723 aa13.55□□□□□ -0.24
PDGFRB-203ENST00000517660 RPS8P62241 208 aaKnown RBP13.55□□□□□ -0.24
PDGFRB-203ENST00000517660 PKN2Q16513 984 aaKnown RBP13.55□□□□□ -0.24
PDGFRB-203ENST00000517660 CELF1Q92879 486 aaKnown RBP13.55□□□□□ -0.24
PDGFRB-203ENST00000517660 CDHR2Q9BYE9 1310 aa13.55□□□□□ -0.24
PDGFRB-203ENST00000517660 FANCIQ9NVI1 1328 aa13.55□□□□□ -0.24
PDGFRB-203ENST00000517660 COL6A3P12111 3177 aa13.55□□□□□ -0.24
PDGFRB-203ENST00000517660 PDE8AO60658 829 aa13.54□□□□□ -0.24
PDGFRB-203ENST00000517660 VAMP4O75379 141 aa13.54□□□□□ -0.24
PDGFRB-203ENST00000517660 RAD17O75943 681 aa13.54□□□□□ -0.24
PDGFRB-203ENST00000517660 KIAA2012Q0VF49 1180 aa13.54□□□□□ -0.24
PDGFRB-203ENST00000517660 NEXNQ0ZGT2 675 aa13.54□□□□□ -0.24
PDGFRB-203ENST00000517660 G2E3Q7L622 706 aa13.54□□□□□ -0.24
PDGFRB-203ENST00000517660 YDJCA8MPS7 323 aa13.53□□□□□ -0.24
PDGFRB-203ENST00000517660 EXOSC9Q06265 439 aaKnown RBP13.53□□□□□ -0.24
PDGFRB-203ENST00000517660 FBXO46Q6PJ61 603 aaPredicted RBP13.53□□□□□ -0.24
PDGFRB-203ENST00000517660 SAMD7Q7Z3H4 446 aa13.53□□□□□ -0.24
PDGFRB-203ENST00000517660 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
PDGFRB-203ENST00000517660 JARID2Q92833 1246 aaPredicted RBP13.53□□□□□ -0.24
PDGFRB-203ENST00000517660 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
PDGFRB-203ENST00000517660 COLQQ9Y215 455 aaPredicted RBP13.53□□□□□ -0.24
PDGFRB-203ENST00000517660 AKAP11Q9UKA4 1901 aa13.52□□□□□ -0.24
PDGFRB-203ENST00000517660 TBC1D8O95759 1140 aa13.52□□□□□ -0.25
PDGFRB-203ENST00000517660 IGKV5-2P06315 115 aa13.52□□□□□ -0.25
PDGFRB-203ENST00000517660 FLIIQ13045 1269 aa13.52□□□□□ -0.25
PDGFRB-203ENST00000517660 CCDC152Q4G0S7 254 aa13.52□□□□□ -0.25
PDGFRB-203ENST00000517660 KRT26Q7Z3Y9 468 aa13.52□□□□□ -0.25
PDGFRB-203ENST00000517660 C2orf69Q8N8R5 385 aa13.52□□□□□ -0.25
PDGFRB-203ENST00000517660 MYH16Q9H6N6 1097 aa13.52□□□□□ -0.25
PDGFRB-203ENST00000517660 NSFL1CQ9UNZ2 370 aaKnown RBP13.52□□□□□ -0.25
PDGFRB-203ENST00000517660 GPSM2P81274 684 aa13.51□□□□□ -0.25
PDGFRB-203ENST00000517660 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
PDGFRB-203ENST00000517660 MICALL2Q8IY33 904 aa13.51□□□□□ -0.25
PDGFRB-203ENST00000517660 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
PDGFRB-203ENST00000517660 SEC31BQ9NQW1 1179 aa13.51□□□□□ -0.25
PDGFRB-203ENST00000517660 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
PDGFRB-203ENST00000517660 NEURL1BA8MQ27 555 aa13.5□□□□□ -0.25
PDGFRB-203ENST00000517660 C6orf229H3BNL8 230 aa13.5□□□□□ -0.25
PDGFRB-203ENST00000517660 H7C1W4 665 aa13.5□□□□□ -0.25
PDGFRB-203ENST00000517660 FKBP5Q13451 457 aaPredicted RBP13.5□□□□□ -0.25
PDGFRB-203ENST00000517660 TNIP1Q15025 636 aa13.5□□□□□ -0.25
PDGFRB-203ENST00000517660 BCL2L13Q9BXK5 485 aa13.5□□□□□ -0.25
PDGFRB-203ENST00000517660 R3HDMLQ9H3Y0 253 aa13.5□□□□□ -0.25
PDGFRB-203ENST00000517660 RANBP2P49792 3224 aaKnown RBP13.5□□□□□ -0.25
PDGFRB-203ENST00000517660 ANKRD36CQ5JPF3 1778 aa13.5□□□□□ -0.25
PDGFRB-203ENST00000517660 DUOX1Q9NRD9 1551 aa13.49□□□□□ -0.25
PDGFRB-203ENST00000517660 ASTN2O75129 1339 aaPredicted RBP13.49□□□□□ -0.25
PDGFRB-203ENST00000517660 CWF19L2Q2TBE0 894 aaKnown RBP13.49□□□□□ -0.25
PDGFRB-203ENST00000517660 TBC1D10BQ4KMP7 808 aaPredicted RBP13.49□□□□□ -0.25
PDGFRB-203ENST00000517660 DNAAF4Q8WXU2 420 aa13.49□□□□□ -0.25
PDGFRB-203ENST00000517660 CCDC85AQ96PX6 553 aaPredicted RBP13.49□□□□□ -0.25
PDGFRB-203ENST00000517660 EYA3Q99504 573 aa13.49□□□□□ -0.25
PDGFRB-203ENST00000517660 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
PDGFRB-203ENST00000517660 POLLQ9UGP5 575 aa13.49□□□□□ -0.25
PDGFRB-203ENST00000517660 HDAC9Q9UKV0 1011 aa13.49□□□□□ -0.25
PDGFRB-203ENST00000517660 GPR25O00155 361 aa13.48□□□□□ -0.25
PDGFRB-203ENST00000517660 CTSWP56202 376 aa13.48□□□□□ -0.25
PDGFRB-203ENST00000517660 GCKRQ14397 625 aa13.48□□□□□ -0.25
PDGFRB-203ENST00000517660 ANKRD18AQ8IVF6 992 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms