RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 ANKRD44Q8N8A2 993 aa18.84■□□□□ 0.61
PDCD6-211ENST00000515587 RNF181Q9P0P0 153 aa18.84■□□□□ 0.61
PDCD6-211ENST00000515587 CC2D2BQ6DHV5 1058 aa18.83■□□□□ 0.6
PDCD6-211ENST00000515587 CELF1Q92879 486 aaKnown RBP18.83■□□□□ 0.6
PDCD6-211ENST00000515587 MPHOSPH8Q99549 860 aa18.82■□□□□ 0.6
PDCD6-211ENST00000515587 GRIPAP1Q4V328 841 aa18.81■□□□□ 0.6
PDCD6-211ENST00000515587 CCDC93Q567U6 631 aa18.81■□□□□ 0.6
PDCD6-211ENST00000515587 SP8Q8IXZ3 490 aa18.81■□□□□ 0.6
PDCD6-211ENST00000515587 ATP6V0A2Q9Y487 856 aa18.81■□□□□ 0.6
PDCD6-211ENST00000515587 RTKN2Q8IZC4 609 aa18.8■□□□□ 0.6
PDCD6-211ENST00000515587 C7orf43Q8WVR3 580 aa18.8■□□□□ 0.6
PDCD6-211ENST00000515587 C1orf115Q9H7X2 142 aa18.8■□□□□ 0.6
PDCD6-211ENST00000515587 LRRC37AA6NMS7 1700 aa18.8■□□□□ 0.6
PDCD6-211ENST00000515587 ZBTB40Q9NUA8 1239 aa18.79■□□□□ 0.6
PDCD6-211ENST00000515587 BSDC1Q9NW68 430 aaPredicted RBP18.79■□□□□ 0.6
PDCD6-211ENST00000515587 FER1L6Q2WGJ9 1857 aa18.79■□□□□ 0.6
PDCD6-211ENST00000515587 SRGAP3O43295 1099 aa18.78■□□□□ 0.6
PDCD6-211ENST00000515587 MTX1Q13505 466 aa18.78■□□□□ 0.6
PDCD6-211ENST00000515587 LDHAL6AQ6ZMR3 332 aa18.78■□□□□ 0.6
PDCD6-211ENST00000515587 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
PDCD6-211ENST00000515587 CNNM1Q9NRU3 951 aa18.78■□□□□ 0.6
PDCD6-211ENST00000515587 COL4A1P02462 1669 aa18.78■□□□□ 0.6
PDCD6-211ENST00000515587 ZNF594Q96JF6 807 aaPredicted RBP18.77■□□□□ 0.6
PDCD6-211ENST00000515587 ATP8B2P98198 1209 aa18.76■□□□□ 0.59
PDCD6-211ENST00000515587 DPP8Q6V1X1 898 aaPredicted RBP18.76■□□□□ 0.59
PDCD6-211ENST00000515587 MPNDQ8N594 471 aa18.76■□□□□ 0.59
PDCD6-211ENST00000515587 AAMPQ13685 434 aa18.75■□□□□ 0.59
PDCD6-211ENST00000515587 OLFM4Q6UX06 510 aa18.75■□□□□ 0.59
PDCD6-211ENST00000515587 SUPT20HQ8NEM7 779 aa18.75■□□□□ 0.59
PDCD6-211ENST00000515587 ANKRD2Q9GZV1 360 aa18.75■□□□□ 0.59
PDCD6-211ENST00000515587 TAOK3Q9H2K8 898 aa18.75■□□□□ 0.59
PDCD6-211ENST00000515587 ANKIB1Q9P2G1 1089 aa18.75■□□□□ 0.59
PDCD6-211ENST00000515587 CCDC88AQ3V6T2 1871 aa18.75■□□□□ 0.59
PDCD6-211ENST00000515587 HMMRO75330 724 aa18.74■□□□□ 0.59
PDCD6-211ENST00000515587 RFX5P48382 616 aaPredicted RBP18.74■□□□□ 0.59
PDCD6-211ENST00000515587 FKBP4Q02790 459 aaKnown RBP eCLIP18.74■□□□□ 0.59
PDCD6-211ENST00000515587 CEP85Q6P2H3 762 aa18.74■□□□□ 0.59
PDCD6-211ENST00000515587 RPAP2Q8IXW5 612 aaPredicted RBP18.74■□□□□ 0.59
PDCD6-211ENST00000515587 PCDH10Q9P2E7 1040 aa18.74■□□□□ 0.59
PDCD6-211ENST00000515587 MINPP1Q9UNW1 487 aa18.74■□□□□ 0.59
PDCD6-211ENST00000515587 NSFL1CQ9UNZ2 370 aaKnown RBP18.74■□□□□ 0.59
PDCD6-211ENST00000515587 XDHP47989 1333 aa18.74■□□□□ 0.59
PDCD6-211ENST00000515587 LTBP3Q9NS15 1303 aa18.74■□□□□ 0.59
PDCD6-211ENST00000515587 FOXN1O15353 648 aa18.73■□□□□ 0.59
PDCD6-211ENST00000515587 GPSM2P81274 684 aa18.73■□□□□ 0.59
PDCD6-211ENST00000515587 PTPN12Q05209 780 aaKnown RBP18.73■□□□□ 0.59
PDCD6-211ENST00000515587 KLHDC4Q8TBB5 520 aa18.73■□□□□ 0.59
PDCD6-211ENST00000515587 PSMD1Q99460 953 aa18.73■□□□□ 0.59
PDCD6-211ENST00000515587 FBXO3Q9UK99 471 aa18.73■□□□□ 0.59
PDCD6-211ENST00000515587 SBF1O95248 1867 aa18.73■□□□□ 0.59
PDCD6-211ENST00000515587 A0A1B0GUL6 1792 aa18.73■□□□□ 0.59
PDCD6-211ENST00000515587 MROH5Q6ZUA9 1318 aa18.73■□□□□ 0.59
PDCD6-211ENST00000515587 PNMA6EA0A0J9YXQ4 647 aa18.72■□□□□ 0.59
PDCD6-211ENST00000515587 EYA2O00167 538 aa18.72■□□□□ 0.59
PDCD6-211ENST00000515587 VEGFAP15692 232 aaPredicted RBP18.72■□□□□ 0.59
PDCD6-211ENST00000515587 SSH3Q8TE77 659 aa18.72■□□□□ 0.59
PDCD6-211ENST00000515587 SIL1Q9H173 461 aa18.72■□□□□ 0.59
PDCD6-211ENST00000515587 COPRSQ9NQ92 184 aa18.72■□□□□ 0.59
PDCD6-211ENST00000515587 MKRN1Q9UHC7 482 aaKnown RBP18.72■□□□□ 0.59
PDCD6-211ENST00000515587 C6orf229H3BNL8 230 aa18.71■□□□□ 0.59
PDCD6-211ENST00000515587 NFKBIEO00221 500 aa18.71■□□□□ 0.59
PDCD6-211ENST00000515587 CIAO1O76071 339 aa18.71■□□□□ 0.59
PDCD6-211ENST00000515587 KCNJ4P48050 445 aa18.71■□□□□ 0.59
PDCD6-211ENST00000515587 RASSF7Q02833 373 aa18.71■□□□□ 0.59
PDCD6-211ENST00000515587 CHRNDQ07001 517 aa18.71■□□□□ 0.59
PDCD6-211ENST00000515587 PUS3Q9BZE2 481 aaKnown RBP18.71■□□□□ 0.59
PDCD6-211ENST00000515587 PODXL2Q9NZ53 605 aa18.71■□□□□ 0.59
PDCD6-211ENST00000515587 GGA1Q9UJY5 639 aa18.71■□□□□ 0.59
PDCD6-211ENST00000515587 LTBP1Q14766 1721 aa18.71■□□□□ 0.59
PDCD6-211ENST00000515587 UFL1O94874 794 aa18.7■□□□□ 0.58
PDCD6-211ENST00000515587 ATP2B4P23634 1241 aa18.7■□□□□ 0.58
PDCD6-211ENST00000515587 IRX6P78412 446 aaPredicted RBP18.7■□□□□ 0.58
PDCD6-211ENST00000515587 POLA2Q14181 598 aa18.7■□□□□ 0.58
PDCD6-211ENST00000515587 LRRC24Q50LG9 513 aa18.7■□□□□ 0.58
PDCD6-211ENST00000515587 METTL24Q5JXM2 366 aa18.7■□□□□ 0.58
PDCD6-211ENST00000515587 SLC51AQ86UW1 340 aa18.7■□□□□ 0.58
PDCD6-211ENST00000515587 SNED1Q8TER0 1413 aa18.7■□□□□ 0.58
PDCD6-211ENST00000515587 EYA3Q99504 573 aa18.7■□□□□ 0.58
PDCD6-211ENST00000515587 PA2G4Q9UQ80 394 aaKnown RBP18.7■□□□□ 0.58
PDCD6-211ENST00000515587 DICER1Q9UPY3 1922 aaKnown RBP18.7■□□□□ 0.58
PDCD6-211ENST00000515587 LMNB1P20700 586 aa18.69■□□□□ 0.58
PDCD6-211ENST00000515587 IL15P40933 162 aaPredicted RBP18.69■□□□□ 0.58
PDCD6-211ENST00000515587 G3BP1Q13283 466 aaKnown RBP eCLIP18.69■□□□□ 0.58
PDCD6-211ENST00000515587 OS9Q13438 667 aaPredicted RBP18.69■□□□□ 0.58
PDCD6-211ENST00000515587 EXOC6Q8TAG9 804 aa18.69■□□□□ 0.58
PDCD6-211ENST00000515587 RTFDC1Q9BY42 306 aaPredicted RBP18.69■□□□□ 0.58
PDCD6-211ENST00000515587 VPS33BQ9H267 617 aa18.69■□□□□ 0.58
PDCD6-211ENST00000515587 PRDM10Q9NQV6 1147 aa18.69■□□□□ 0.58
PDCD6-211ENST00000515587 LEMD3Q9Y2U8 911 aa18.69■□□□□ 0.58
PDCD6-211ENST00000515587 RIPOR2Q9Y4F9 1068 aa18.69■□□□□ 0.58
PDCD6-211ENST00000515587 GLTPD2A6NH11 291 aa18.68■□□□□ 0.58
PDCD6-211ENST00000515587 NEFLP07196 543 aa18.68■□□□□ 0.58
PDCD6-211ENST00000515587 HELBQ8NG08 1087 aaPredicted RBP18.68■□□□□ 0.58
PDCD6-211ENST00000515587 TBC1D16Q8TBP0 767 aa18.68■□□□□ 0.58
PDCD6-211ENST00000515587 ZNF277Q9NRM2 450 aaPredicted RBP18.68■□□□□ 0.58
PDCD6-211ENST00000515587 DUOX1Q9NRD9 1551 aa18.68■□□□□ 0.58
PDCD6-211ENST00000515587 SURF6O75683 361 aaKnown RBP18.67■□□□□ 0.58
PDCD6-211ENST00000515587 IARSP41252 1262 aaKnown RBP18.67■□□□□ 0.58
PDCD6-211ENST00000515587 WASHC4Q2M389 1173 aa18.67■□□□□ 0.58
PDCD6-211ENST00000515587 CEP126Q9P2H0 1117 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms