RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 VPS33BQ9H267 617 aa14.85□□□□□ -0.03
SNF8-215ENST00000515572 ZBTB40Q9NUA8 1239 aa14.85□□□□□ -0.03
SNF8-215ENST00000515572 MINPP1Q9UNW1 487 aa14.85□□□□□ -0.03
SNF8-215ENST00000515572 NSFL1CQ9UNZ2 370 aaKnown RBP14.85□□□□□ -0.03
SNF8-215ENST00000515572 TIAM2Q8IVF5 1701 aa14.85□□□□□ -0.03
SNF8-215ENST00000515572 XDHP47989 1333 aa14.85□□□□□ -0.03
SNF8-215ENST00000515572 DUOX1Q9NRD9 1551 aa14.85□□□□□ -0.03
SNF8-215ENST00000515572 SRGAP3O43295 1099 aa14.84□□□□□ -0.03
SNF8-215ENST00000515572 GPSM2P81274 684 aa14.84□□□□□ -0.03
SNF8-215ENST00000515572 ZNF594Q96JF6 807 aaPredicted RBP14.84□□□□□ -0.03
SNF8-215ENST00000515572 CNNM1Q9NRU3 951 aa14.84□□□□□ -0.03
SNF8-215ENST00000515572 ANKIB1Q9P2G1 1089 aa14.84□□□□□ -0.03
SNF8-215ENST00000515572 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
SNF8-215ENST00000515572 SUPT16HQ9Y5B9 1047 aaKnown RBP14.84□□□□□ -0.03
SNF8-215ENST00000515572 IARSP41252 1262 aaKnown RBP14.83□□□□□ -0.04
SNF8-215ENST00000515572 RFX5P48382 616 aaPredicted RBP14.83□□□□□ -0.04
SNF8-215ENST00000515572 SLC51AQ86UW1 340 aa14.83□□□□□ -0.04
SNF8-215ENST00000515572 CIAO1O76071 339 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 ATP2B4P23634 1241 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 ATP8B2P98198 1209 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 PTPN12Q05209 780 aaKnown RBP14.82□□□□□ -0.04
SNF8-215ENST00000515572 CHRNDQ07001 517 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 C9orf131Q5VYM1 1079 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 TBC1D16Q8TBP0 767 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 EYA3Q99504 573 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 C1orf115Q9H7X2 142 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 COPRSQ9NQ92 184 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 ZNF277Q9NRM2 450 aaPredicted RBP14.82□□□□□ -0.04
SNF8-215ENST00000515572 RNF181Q9P0P0 153 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 GGA1Q9UJY5 639 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 MROH5Q6ZUA9 1318 aa14.82□□□□□ -0.04
SNF8-215ENST00000515572 ZC3H4Q9UPT8 1303 aaKnown RBP14.82□□□□□ -0.04
SNF8-215ENST00000515572 GOLGB1Q14789 3259 aaKnown RBP14.81□□□□□ -0.04
SNF8-215ENST00000515572 C6orf229H3BNL8 230 aa14.81□□□□□ -0.04
SNF8-215ENST00000515572 UFL1O94874 794 aa14.81□□□□□ -0.04
SNF8-215ENST00000515572 CEP85Q6P2H3 762 aa14.81□□□□□ -0.04
SNF8-215ENST00000515572 RPAP2Q8IXW5 612 aaPredicted RBP14.81□□□□□ -0.04
SNF8-215ENST00000515572 LEMD3Q9Y2U8 911 aa14.81□□□□□ -0.04
SNF8-215ENST00000515572 RIPOR2Q9Y4F9 1068 aa14.81□□□□□ -0.04
SNF8-215ENST00000515572 PNMA6EA0A0J9YXQ4 647 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 EYA2O00167 538 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 PPIP5K2O43314 1243 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 PRELPP51888 382 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 KIAA2012Q0VF49 1180 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 AAMPQ13685 434 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 POLA2Q14181 598 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 WASHC4Q2M389 1173 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 LARGE2Q8N3Y3 721 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 SSH3Q8TE77 659 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 PUS3Q9BZE2 481 aaKnown RBP14.8□□□□□ -0.04
SNF8-215ENST00000515572 POLLQ9UGP5 575 aa14.8□□□□□ -0.04
SNF8-215ENST00000515572 ZNF804BA4D1E1 1349 aa14.79□□□□□ -0.04
SNF8-215ENST00000515572 KCNJ4P48050 445 aa14.79□□□□□ -0.04
SNF8-215ENST00000515572 JDP2Q8WYK2 163 aa14.79□□□□□ -0.04
SNF8-215ENST00000515572 CRBNQ96SW2 442 aa14.79□□□□□ -0.04
SNF8-215ENST00000515572 ZC3H12CQ9C0D7 883 aaKnown RBP14.79□□□□□ -0.04
SNF8-215ENST00000515572 MED23Q9ULK4 1368 aa14.78□□□□□ -0.04
SNF8-215ENST00000515572 HMMRO75330 724 aa14.78□□□□□ -0.04
SNF8-215ENST00000515572 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
SNF8-215ENST00000515572 IL15P40933 162 aaPredicted RBP14.78□□□□□ -0.04
SNF8-215ENST00000515572 AOC3Q16853 763 aa14.78□□□□□ -0.04
SNF8-215ENST00000515572 LRRC24Q50LG9 513 aa14.78□□□□□ -0.04
SNF8-215ENST00000515572 METTL24Q5JXM2 366 aa14.78□□□□□ -0.04
SNF8-215ENST00000515572 NIM1KQ8IY84 436 aa14.78□□□□□ -0.04
SNF8-215ENST00000515572 SIL1Q9H173 461 aa14.78□□□□□ -0.04
SNF8-215ENST00000515572 TAF5LO75529 589 aa14.77□□□□□ -0.05
SNF8-215ENST00000515572 PDE8BO95263 885 aa14.77□□□□□ -0.05
SNF8-215ENST00000515572 UBE4AQ14139 1066 aa14.77□□□□□ -0.05
SNF8-215ENST00000515572 C15orf52Q6ZUT6 534 aaKnown RBP14.77□□□□□ -0.05
SNF8-215ENST00000515572 ATG9AQ7Z3C6 839 aa14.77□□□□□ -0.05
SNF8-215ENST00000515572 HELBQ8NG08 1087 aaPredicted RBP14.77□□□□□ -0.05
SNF8-215ENST00000515572 PA2G4Q9UQ80 394 aaKnown RBP14.77□□□□□ -0.05
SNF8-215ENST00000515572 VGLL2Q8N8G2 317 aa14.76□□□□□ -0.05
SNF8-215ENST00000515572 CEP126Q9P2H0 1117 aa14.76□□□□□ -0.05
SNF8-215ENST00000515572 ZNRF3Q9ULT6 936 aa14.76□□□□□ -0.05
SNF8-215ENST00000515572 NOP58Q9Y2X3 529 aaKnown RBP14.76□□□□□ -0.05
SNF8-215ENST00000515572 COL4A5P29400 1685 aa14.76□□□□□ -0.05
SNF8-215ENST00000515572 PSME4Q14997 1843 aa14.76□□□□□ -0.05
SNF8-215ENST00000515572 G3V3G9 751 aa14.75□□□□□ -0.05
SNF8-215ENST00000515572 FZD9O00144 591 aa14.75□□□□□ -0.05
SNF8-215ENST00000515572 RIMBP2O15034 1052 aa14.75□□□□□ -0.05
SNF8-215ENST00000515572 SURF6O75683 361 aaKnown RBP14.75□□□□□ -0.05
SNF8-215ENST00000515572 YY1P25490 414 aa14.75□□□□□ -0.05
SNF8-215ENST00000515572 G3BP1Q13283 466 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNF8-215ENST00000515572 PUM3Q15397 648 aaKnown RBP14.75□□□□□ -0.05
SNF8-215ENST00000515572 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
SNF8-215ENST00000515572 ARAP2Q8WZ64 1704 aa14.75□□□□□ -0.05
SNF8-215ENST00000515572 HSP90AB4PQ58FF6 505 aa14.74□□□□□ -0.05
SNF8-215ENST00000515572 SIRT2Q8IXJ6 389 aa14.74□□□□□ -0.05
SNF8-215ENST00000515572 GPR101Q96P66 508 aaPredicted RBP14.74□□□□□ -0.05
SNF8-215ENST00000515572 IRS2Q9Y4H2 1338 aa14.73□□□□□ -0.05
SNF8-215ENST00000515572 WTIPA6NIX2 430 aaPredicted RBP14.73□□□□□ -0.05
SNF8-215ENST00000515572 EIF6P56537 245 aaKnown RBP14.73□□□□□ -0.05
SNF8-215ENST00000515572 OS9Q13438 667 aaPredicted RBP14.73□□□□□ -0.05
SNF8-215ENST00000515572 DPY19L2Q6NUT2 758 aa14.73□□□□□ -0.05
SNF8-215ENST00000515572 ERC1Q8IUD2 1116 aa14.73□□□□□ -0.05
SNF8-215ENST00000515572 COA1Q9GZY4 146 aa14.73□□□□□ -0.05
SNF8-215ENST00000515572 AKAP2Q9Y2D5 859 aa14.73□□□□□ -0.05
SNF8-215ENST00000515572 KDM2BQ8NHM5 1336 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms