RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 TAF7LQ5H9L4 462 aa14.85□□□□□ -0.03
PDLIM5-220ENST00000514830 LDHAL6AQ6ZMR3 332 aa14.85□□□□□ -0.03
PDLIM5-220ENST00000514830 ATG9AQ7Z3C6 839 aa14.85□□□□□ -0.03
PDLIM5-220ENST00000514830 ERC1Q8IUD2 1116 aa14.85□□□□□ -0.03
PDLIM5-220ENST00000514830 MROH5Q6ZUA9 1318 aa14.85□□□□□ -0.03
PDLIM5-220ENST00000514830 SURF6O75683 361 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 GRIPAP1Q4V328 841 aa14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 IFFO2Q5TF58 517 aa14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 CC2D2BQ6DHV5 1058 aa14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 SP8Q8IXZ3 490 aa14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 TTLL6Q8N841 843 aa14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 KLHDC4Q8TBB5 520 aa14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 C7orf43Q8WVR3 580 aa14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 ZNF594Q96JF6 807 aaPredicted RBP14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 CCDC136Q96JN2 1154 aa14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 MPHOSPH8Q99549 860 aa14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 PIM2Q9P1W9 311 aa14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 PA2G4Q9UQ80 394 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-220ENST00000514830 SNED1Q8TER0 1413 aa14.83□□□□□ -0.03
PDLIM5-220ENST00000514830 FER1L6Q2WGJ9 1857 aa14.83□□□□□ -0.04
PDLIM5-220ENST00000514830 A0A0G2JLW4 131 aa14.83□□□□□ -0.04
PDLIM5-220ENST00000514830 G3BP1Q13283 466 aaKnown RBP eCLIP14.83□□□□□ -0.04
PDLIM5-220ENST00000514830 CENPQQ7L2Z9 268 aaPredicted RBP14.83□□□□□ -0.04
PDLIM5-220ENST00000514830 ZNF622Q969S3 477 aaKnown RBP eCLIP14.83□□□□□ -0.04
PDLIM5-220ENST00000514830 ATP6V0A2Q9Y487 856 aa14.83□□□□□ -0.04
PDLIM5-220ENST00000514830 UTRNP46939 3433 aa14.82□□□□□ -0.04
PDLIM5-220ENST00000514830 PPEF1O14829 653 aaPredicted RBP14.82□□□□□ -0.04
PDLIM5-220ENST00000514830 LRRC24Q50LG9 513 aa14.82□□□□□ -0.04
PDLIM5-220ENST00000514830 PRPF40BQ6NWY9 871 aaKnown RBP14.82□□□□□ -0.04
PDLIM5-220ENST00000514830 VGLL2Q8N8G2 317 aa14.82□□□□□ -0.04
PDLIM5-220ENST00000514830 PUS3Q9BZE2 481 aaKnown RBP14.82□□□□□ -0.04
PDLIM5-220ENST00000514830 ANKRD2Q9GZV1 360 aa14.82□□□□□ -0.04
PDLIM5-220ENST00000514830 GPR108Q9NPR9 543 aa14.82□□□□□ -0.04
PDLIM5-220ENST00000514830 CNNM1Q9NRU3 951 aa14.82□□□□□ -0.04
PDLIM5-220ENST00000514830 MINPP1Q9UNW1 487 aa14.82□□□□□ -0.04
PDLIM5-220ENST00000514830 SASH1O94885 1247 aa14.81□□□□□ -0.04
PDLIM5-220ENST00000514830 SOGA3Q5TF21 947 aa14.81□□□□□ -0.04
PDLIM5-220ENST00000514830 KIF1BPQ96EK5 621 aa14.81□□□□□ -0.04
PDLIM5-220ENST00000514830 SIL1Q9H173 461 aa14.81□□□□□ -0.04
PDLIM5-220ENST00000514830 GPBP1L1Q9HC44 474 aaPredicted RBP14.81□□□□□ -0.04
PDLIM5-220ENST00000514830 PODXL2Q9NZ53 605 aa14.81□□□□□ -0.04
PDLIM5-220ENST00000514830 EXOC6BQ9Y2D4 811 aa14.81□□□□□ -0.04
PDLIM5-220ENST00000514830 DALRD3Q5D0E6 543 aaKnown RBP14.8□□□□□ -0.04
PDLIM5-220ENST00000514830 NLGN2Q8NFZ4 835 aa14.8□□□□□ -0.04
PDLIM5-220ENST00000514830 RHPN1Q8TCX5 695 aa14.8□□□□□ -0.04
PDLIM5-220ENST00000514830 GTF3C3Q9Y5Q9 886 aa14.8□□□□□ -0.04
PDLIM5-220ENST00000514830 DUOX1Q9NRD9 1551 aa14.8□□□□□ -0.04
PDLIM5-220ENST00000514830 PDE8BO95263 885 aa14.79□□□□□ -0.04
PDLIM5-220ENST00000514830 XDHP47989 1333 aa14.79□□□□□ -0.04
PDLIM5-220ENST00000514830 CHRNDQ07001 517 aa14.79□□□□□ -0.04
PDLIM5-220ENST00000514830 OS9Q13438 667 aaPredicted RBP14.79□□□□□ -0.04
PDLIM5-220ENST00000514830 LRRCC1Q9C099 1032 aa14.79□□□□□ -0.04
PDLIM5-220ENST00000514830 CEP126Q9P2H0 1117 aa14.79□□□□□ -0.04
PDLIM5-220ENST00000514830 ZNF609O15014 1411 aa14.78□□□□□ -0.04
PDLIM5-220ENST00000514830 ZBTB22O15209 634 aa14.78□□□□□ -0.04
PDLIM5-220ENST00000514830 NUCB1Q02818 461 aa14.78□□□□□ -0.04
PDLIM5-220ENST00000514830 UBE4AQ14139 1066 aa14.78□□□□□ -0.04
PDLIM5-220ENST00000514830 METTL24Q5JXM2 366 aa14.78□□□□□ -0.04
PDLIM5-220ENST00000514830 TMX4Q9H1E5 349 aaPredicted RBP14.78□□□□□ -0.04
PDLIM5-220ENST00000514830 AKAP2Q9Y2D5 859 aa14.78□□□□□ -0.04
PDLIM5-220ENST00000514830 LEMD3Q9Y2U8 911 aa14.78□□□□□ -0.04
PDLIM5-220ENST00000514830 FGFR2P21802 821 aa14.77□□□□□ -0.05
PDLIM5-220ENST00000514830 TFCP2Q12800 502 aa14.77□□□□□ -0.05
PDLIM5-220ENST00000514830 PUM3Q15397 648 aaKnown RBP14.77□□□□□ -0.05
PDLIM5-220ENST00000514830 B4GALNT3Q6L9W6 998 aa14.77□□□□□ -0.05
PDLIM5-220ENST00000514830 C15orf52Q6ZUT6 534 aaKnown RBP14.77□□□□□ -0.05
PDLIM5-220ENST00000514830 RTKN2Q8IZC4 609 aa14.77□□□□□ -0.05
PDLIM5-220ENST00000514830 RTFDC1Q9BY42 306 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-220ENST00000514830 ATP2B4P23634 1241 aa14.76□□□□□ -0.05
PDLIM5-220ENST00000514830 CCDC93Q567U6 631 aa14.76□□□□□ -0.05
PDLIM5-220ENST00000514830 PSMD1Q99460 953 aa14.76□□□□□ -0.05
PDLIM5-220ENST00000514830 LTBP3Q9NS15 1303 aa14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 IRS2Q9Y4H2 1338 aa14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 DICER1Q9UPY3 1922 aaKnown RBP14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 GPSM2P81274 684 aa14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 TNNI3KQ59H18 835 aa14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 CHD1LQ86WJ1 897 aa14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 CLASRPQ8N2M8 674 aaKnown RBP14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 MPNDQ8N594 471 aa14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 LPIN2Q92539 896 aa14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 VPS33BQ9H267 617 aa14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 FPGT-TNNI3KV9GXZ4 949 aa14.75□□□□□ -0.05
PDLIM5-220ENST00000514830 MYH13Q9UKX3 1938 aa14.74□□□□□ -0.05
PDLIM5-220ENST00000514830 MED23Q9ULK4 1368 aa14.74□□□□□ -0.05
PDLIM5-220ENST00000514830 ZNF804BA4D1E1 1349 aa14.74□□□□□ -0.05
PDLIM5-220ENST00000514830 C21orf2O43822 256 aa14.74□□□□□ -0.05
PDLIM5-220ENST00000514830 YBX3P16989 372 aaKnown RBP eCLIP14.74□□□□□ -0.051e-7■■□□□ 12.5
PDLIM5-220ENST00000514830 ATP2B3Q16720 1220 aa14.74□□□□□ -0.05
PDLIM5-220ENST00000514830 ANKRD45Q5TZF3 282 aa14.74□□□□□ -0.05
PDLIM5-220ENST00000514830 EAF2Q96CJ1 260 aaPredicted RBP14.74□□□□□ -0.05
PDLIM5-220ENST00000514830 ANKIB1Q9P2G1 1089 aa14.74□□□□□ -0.05
PDLIM5-220ENST00000514830 GGA1Q9UJY5 639 aa14.74□□□□□ -0.05
PDLIM5-220ENST00000514830 SBF1O95248 1867 aa14.74□□□□□ -0.05
PDLIM5-220ENST00000514830 SALL3Q9BXA9 1300 aa14.73□□□□□ -0.05
PDLIM5-220ENST00000514830 A0A1B0GUL7 405 aa14.73□□□□□ -0.05
PDLIM5-220ENST00000514830 TAF5LO75529 589 aa14.73□□□□□ -0.05
PDLIM5-220ENST00000514830 DPP8Q6V1X1 898 aaPredicted RBP14.73□□□□□ -0.05
PDLIM5-220ENST00000514830 SUPT20HQ8NEM7 779 aa14.73□□□□□ -0.05
PDLIM5-220ENST00000514830 HELBQ8NG08 1087 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms