RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 CWC25Q9NXE8 425 aaPredicted RBP25.41■■□□□ 1.66
USP53-208ENST00000514305 F6X3S4 739 aa25.4■■□□□ 1.66
USP53-208ENST00000514305 ALDH1L1O75891 902 aa25.4■■□□□ 1.66
USP53-208ENST00000514305 SLC51AQ86UW1 340 aa25.4■■□□□ 1.66
USP53-208ENST00000514305 TAF1P21675 1872 aa25.4■■□□□ 1.66
USP53-208ENST00000514305 PASKQ96RG2 1323 aa25.39■■□□□ 1.66
USP53-208ENST00000514305 PCNTO95613 3336 aa25.39■■□□□ 1.66
USP53-208ENST00000514305 ATP5J2-PTCD1G3V325 749 aa25.39■■□□□ 1.66
USP53-208ENST00000514305 AOC3Q16853 763 aa25.39■■□□□ 1.66
USP53-208ENST00000514305 DPP8Q6V1X1 898 aaPredicted RBP25.39■■□□□ 1.66
USP53-208ENST00000514305 SP8Q8IXZ3 490 aa25.39■■□□□ 1.66
USP53-208ENST00000514305 GRAPQ13588 217 aa25.38■■□□□ 1.65
USP53-208ENST00000514305 DZIP1LQ8IYY4 767 aaKnown RBP25.38■■□□□ 1.65
USP53-208ENST00000514305 GRAPLQ8TC17 118 aaPredicted RBP25.38■■□□□ 1.65
USP53-208ENST00000514305 HDAC5Q9UQL6 1122 aa25.38■■□□□ 1.65
USP53-208ENST00000514305 TRIM27P14373 513 aa25.37■■□□□ 1.65
USP53-208ENST00000514305 BEND3Q5T5X7 828 aa25.37■■□□□ 1.65
USP53-208ENST00000514305 MPNDQ8N594 471 aa25.37■■□□□ 1.65
USP53-208ENST00000514305 MKRN1Q9UHC7 482 aaKnown RBP25.37■■□□□ 1.65
USP53-208ENST00000514305 NEURL1BA8MQ27 555 aa25.36■■□□□ 1.65
USP53-208ENST00000514305 TMC4Q7Z404 712 aa25.36■■□□□ 1.65
USP53-208ENST00000514305 RTFDC1Q9BY42 306 aaPredicted RBP25.36■■□□□ 1.65
USP53-208ENST00000514305 CHMP4BQ9H444 224 aaKnown RBP25.36■■□□□ 1.65
USP53-208ENST00000514305 LTBP1Q14766 1721 aa25.35■■□□□ 1.65
USP53-208ENST00000514305 TMEM88BA6NKF7 163 aa25.35■■□□□ 1.65
USP53-208ENST00000514305 ITGBL1O95965 494 aaPredicted RBP25.35■■□□□ 1.65
USP53-208ENST00000514305 FAM89AQ96GI7 184 aa25.35■■□□□ 1.65
USP53-208ENST00000514305 LRRC37AA6NMS7 1700 aa25.34■■□□□ 1.65
USP53-208ENST00000514305 IGKV5-2P06315 115 aa25.34■■□□□ 1.65
USP53-208ENST00000514305 HSPA1AP0DMV8 641 aaKnown RBP25.34■■□□□ 1.65
USP53-208ENST00000514305 HSPA1BP0DMV9 641 aaKnown RBP25.34■■□□□ 1.65
USP53-208ENST00000514305 SCNN1DP51172 638 aa25.34■■□□□ 1.65
USP53-208ENST00000514305 PDE3AQ14432 1141 aa25.34■■□□□ 1.65
USP53-208ENST00000514305 MAP1SQ66K74 1059 aaPredicted RBP25.34■■□□□ 1.65
USP53-208ENST00000514305 CNTROBQ8N137 903 aa25.34■■□□□ 1.65
USP53-208ENST00000514305 ZBTB38Q8NAP3 1195 aaPredicted RBP25.34■■□□□ 1.65
USP53-208ENST00000514305 C9orf78Q9NZ63 289 aaPredicted RBP25.34■■□□□ 1.65
USP53-208ENST00000514305 ZNRF3Q9ULT6 936 aa25.34■■□□□ 1.65
USP53-208ENST00000514305 GCKRQ14397 625 aa25.33■■□□□ 1.65
USP53-208ENST00000514305 CWF19L2Q2TBE0 894 aaKnown RBP25.33■■□□□ 1.65
USP53-208ENST00000514305 INTS3Q68E01 1043 aaKnown RBP25.33■■□□□ 1.65
USP53-208ENST00000514305 CLUAP1Q96AJ1 413 aa25.33■■□□□ 1.65
USP53-208ENST00000514305 CNTNAP1P78357 1384 aa25.32■■□□□ 1.64
USP53-208ENST00000514305 PCCAP05165 728 aaPredicted RBP25.32■■□□□ 1.64
USP53-208ENST00000514305 RTL5Q5HYW3 569 aaPredicted RBP25.32■■□□□ 1.64
USP53-208ENST00000514305 SPDYE1Q8NFV5 336 aaPredicted RBP25.32■■□□□ 1.64
USP53-208ENST00000514305 EPS15P42566 896 aa25.31■■□□□ 1.64
USP53-208ENST00000514305 KIAA2012Q0VF49 1180 aa25.31■■□□□ 1.64
USP53-208ENST00000514305 USP50Q70EL3 339 aaPredicted RBP25.31■■□□□ 1.64
USP53-208ENST00000514305 RRP1P56182 461 aaKnown RBP25.3■■□□□ 1.64
USP53-208ENST00000514305 SF3B3Q15393 1217 aaKnown RBP25.3■■□□□ 1.64
USP53-208ENST00000514305 IRS4O14654 1257 aaPredicted RBP25.29■■□□□ 1.64
USP53-208ENST00000514305 CXCL9Q07325 125 aa25.29■■□□□ 1.64
USP53-208ENST00000514305 COL13A1Q5TAT6 717 aaPredicted RBP25.29■■□□□ 1.64
USP53-208ENST00000514305 GRM8O00222 908 aa25.28■■□□□ 1.64
USP53-208ENST00000514305 GNAI3P08754 354 aa25.28■■□□□ 1.64
USP53-208ENST00000514305 CIAPIN1Q6FI81 312 aa25.28■■□□□ 1.64
USP53-208ENST00000514305 ADARB2Q9NS39 739 aaKnown RBP25.28■■□□□ 1.64
USP53-208ENST00000514305 GPRC5DQ9NZD1 345 aa25.28■■□□□ 1.64
USP53-208ENST00000514305 DUOX1Q9NRD9 1551 aa25.27■■□□□ 1.64
USP53-208ENST00000514305 H7C1W4 665 aa25.27■■□□□ 1.64
USP53-208ENST00000514305 PLIN1O60240 522 aa25.27■■□□□ 1.64
USP53-208ENST00000514305 TNIP1Q15025 636 aa25.27■■□□□ 1.64
USP53-208ENST00000514305 CELF1Q92879 486 aaKnown RBP25.27■■□□□ 1.64
USP53-208ENST00000514305 CDHR2Q9BYE9 1310 aa25.27■■□□□ 1.64
USP53-208ENST00000514305 TRPM7Q96QT4 1865 aa25.27■■□□□ 1.64
USP53-208ENST00000514305 ITPRIPQ8IWB1 547 aa25.26■■□□□ 1.63
USP53-208ENST00000514305 TMEM57Q8N5G2 664 aa25.26■■□□□ 1.63
USP53-208ENST00000514305 NSFL1CQ9UNZ2 370 aaKnown RBP25.26■■□□□ 1.63
USP53-208ENST00000514305 DDX19BQ9UMR2 479 aa25.25■■□□□ 1.63
USP53-208ENST00000514305 SUPT16HQ9Y5B9 1047 aaKnown RBP25.25■■□□□ 1.63
USP53-208ENST00000514305 RAD17O75943 681 aa25.24■■□□□ 1.63
USP53-208ENST00000514305 GMPSP49915 693 aaPredicted RBP25.24■■□□□ 1.63
USP53-208ENST00000514305 WASHC4Q2M389 1173 aa25.24■■□□□ 1.63
USP53-208ENST00000514305 UBE3BQ7Z3V4 1068 aa25.24■■□□□ 1.63
USP53-208ENST00000514305 ABT1Q9ULW3 272 aaKnown RBP25.24■■□□□ 1.63
USP53-208ENST00000514305 PDE8AO60658 829 aa25.23■■□□□ 1.63
USP53-208ENST00000514305 UBTFL1P0CB47 393 aaPredicted RBP25.23■■□□□ 1.63
USP53-208ENST00000514305 UTYO14607 1347 aa25.22■■□□□ 1.63
USP53-208ENST00000514305 C6orf229H3BNL8 230 aa25.22■■□□□ 1.63
USP53-208ENST00000514305 VEGFBP49765 207 aa25.22■■□□□ 1.63
USP53-208ENST00000514305 RPS8P62241 208 aaKnown RBP25.22■■□□□ 1.63
USP53-208ENST00000514305 MVPQ14764 893 aaKnown RBP25.22■■□□□ 1.63
USP53-208ENST00000514305 DEFB115Q30KQ5 88 aa25.22■■□□□ 1.63
USP53-208ENST00000514305 TNS4Q8IZW8 715 aa25.22■■□□□ 1.63
USP53-208ENST00000514305 PANK1Q8TE04 598 aa25.22■■□□□ 1.63
USP53-208ENST00000514305 EYA3Q99504 573 aa25.22■■□□□ 1.63
USP53-208ENST00000514305 RASSF10A6NK89 507 aa25.21■■□□□ 1.63
USP53-208ENST00000514305 USP44Q9H0E7 712 aa25.21■■□□□ 1.63
USP53-208ENST00000514305 COL4A1P02462 1669 aa25.2■■□□□ 1.63
USP53-208ENST00000514305 CCDC152Q4G0S7 254 aa25.2■■□□□ 1.62
USP53-208ENST00000514305 PLA2G12BQ9BX93 195 aa25.2■■□□□ 1.62
USP53-208ENST00000514305 TNNQ9UQP3 1299 aa25.2■■□□□ 1.62
USP53-208ENST00000514305 YDJCA8MPS7 323 aa25.19■■□□□ 1.62
USP53-208ENST00000514305 GPSM2P81274 684 aa25.19■■□□□ 1.62
USP53-208ENST00000514305 AIDAQ96BJ3 306 aa25.19■■□□□ 1.62
USP53-208ENST00000514305 MYH3P11055 1940 aa25.19■■□□□ 1.62
USP53-208ENST00000514305 RIMBP2O15034 1052 aa25.18■■□□□ 1.62
USP53-208ENST00000514305 RLBP1P12271 317 aa25.18■■□□□ 1.62
USP53-208ENST00000514305 DBNDD1Q9H9R9 158 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms