RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SNED1Q8TER0 1413 aa14.13□□□□□ -0.15
HTT-213ENST00000513806 TAF5LO75529 589 aa14.12□□□□□ -0.15
HTT-213ENST00000513806 BBOX1O75936 387 aa14.12□□□□□ -0.15
HTT-213ENST00000513806 PRELPP51888 382 aa14.12□□□□□ -0.15
HTT-213ENST00000513806 MTX1Q13505 466 aa14.12□□□□□ -0.15
HTT-213ENST00000513806 POLA2Q14181 598 aa14.12□□□□□ -0.15
HTT-213ENST00000513806 LDHAL6AQ6ZMR3 332 aa14.12□□□□□ -0.15
HTT-213ENST00000513806 ARHGAP27Q6ZUM4 889 aa14.12□□□□□ -0.15
HTT-213ENST00000513806 MINPP1Q9UNW1 487 aa14.12□□□□□ -0.15
HTT-213ENST00000513806 NFKBIEO00221 500 aa14.11□□□□□ -0.15
HTT-213ENST00000513806 CHRNDQ07001 517 aa14.11□□□□□ -0.15
HTT-213ENST00000513806 SP8Q8IXZ3 490 aa14.11□□□□□ -0.15
HTT-213ENST00000513806 SSH3Q8TE77 659 aa14.11□□□□□ -0.15
HTT-213ENST00000513806 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
HTT-213ENST00000513806 BSDC1Q9NW68 430 aaPredicted RBP14.11□□□□□ -0.15
HTT-213ENST00000513806 HDAC5Q9UQL6 1122 aa14.11□□□□□ -0.15
HTT-213ENST00000513806 CHD4Q14839 1912 aa14.1□□□□□ -0.15
HTT-213ENST00000513806 DICER1Q9UPY3 1922 aaKnown RBP14.1□□□□□ -0.15
HTT-213ENST00000513806 APBB1O00213 710 aa14.1□□□□□ -0.15
HTT-213ENST00000513806 CCDC93Q567U6 631 aa14.1□□□□□ -0.15
HTT-213ENST00000513806 ATG9AQ7Z3C6 839 aa14.1□□□□□ -0.15
HTT-213ENST00000513806 NSFL1CQ9UNZ2 370 aaKnown RBP14.1□□□□□ -0.15
HTT-213ENST00000513806 EXOC6BQ9Y2D4 811 aa14.1□□□□□ -0.15
HTT-213ENST00000513806 RIPOR2Q9Y4F9 1068 aa14.1□□□□□ -0.15
HTT-213ENST00000513806 EYA2O00167 538 aa14.09□□□□□ -0.15
HTT-213ENST00000513806 KLRK1P26718 216 aa14.09□□□□□ -0.15
HTT-213ENST00000513806 CHMP4BQ9H444 224 aaKnown RBP14.09□□□□□ -0.15
HTT-213ENST00000513806 COPRSQ9NQ92 184 aa14.09□□□□□ -0.15
HTT-213ENST00000513806 ZNF277Q9NRM2 450 aaPredicted RBP14.09□□□□□ -0.15
HTT-213ENST00000513806 ANKIB1Q9P2G1 1089 aa14.09□□□□□ -0.15
HTT-213ENST00000513806 POLLQ9UGP5 575 aa14.09□□□□□ -0.15
HTT-213ENST00000513806 COL4A5P29400 1685 aa14.09□□□□□ -0.15
HTT-213ENST00000513806 TIAM2Q8IVF5 1701 aa14.08□□□□□ -0.16
HTT-213ENST00000513806 RIMBP2O15034 1052 aa14.08□□□□□ -0.16
HTT-213ENST00000513806 SURF6O75683 361 aaKnown RBP14.08□□□□□ -0.16
HTT-213ENST00000513806 METTL24Q5JXM2 366 aa14.08□□□□□ -0.16
HTT-213ENST00000513806 DPP8Q6V1X1 898 aaPredicted RBP14.08□□□□□ -0.16
HTT-213ENST00000513806 RPAP2Q8IXW5 612 aaPredicted RBP14.08□□□□□ -0.16
HTT-213ENST00000513806 MPNDQ8N594 471 aa14.08□□□□□ -0.16
HTT-213ENST00000513806 C6orf229H3BNL8 230 aa14.07□□□□□ -0.16
HTT-213ENST00000513806 UFL1O94874 794 aa14.07□□□□□ -0.16
HTT-213ENST00000513806 SASH1O94885 1247 aa14.07□□□□□ -0.16
HTT-213ENST00000513806 IGHDP01880 384 aa14.07□□□□□ -0.16
HTT-213ENST00000513806 TFCP2Q12800 502 aa14.07□□□□□ -0.16
HTT-213ENST00000513806 TBC1D16Q8TBP0 767 aa14.07□□□□□ -0.16
HTT-213ENST00000513806 MYH13Q9UKX3 1938 aa14.06□□□□□ -0.16
HTT-213ENST00000513806 SCN9AQ15858 1988 aa14.06□□□□□ -0.16
HTT-213ENST00000513806 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
HTT-213ENST00000513806 G3BP1Q13283 466 aaKnown RBP eCLIP14.06□□□□□ -0.16
HTT-213ENST00000513806 OS9Q13438 667 aaPredicted RBP14.06□□□□□ -0.16
HTT-213ENST00000513806 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
HTT-213ENST00000513806 TXNRD3Q86VQ6 643 aa14.06□□□□□ -0.16
HTT-213ENST00000513806 VGLL2Q8N8G2 317 aa14.06□□□□□ -0.16
HTT-213ENST00000513806 TMX4Q9H1E5 349 aaPredicted RBP14.06□□□□□ -0.16
HTT-213ENST00000513806 TAOK3Q9H2K8 898 aa14.06□□□□□ -0.16
HTT-213ENST00000513806 GGA1Q9UJY5 639 aa14.06□□□□□ -0.16
HTT-213ENST00000513806 XDHP47989 1333 aa14.06□□□□□ -0.16
HTT-213ENST00000513806 ARAP2Q8WZ64 1704 aa14.06□□□□□ -0.16
HTT-213ENST00000513806 SMARCA5O60264 1052 aaPredicted RBP14.05□□□□□ -0.16
HTT-213ENST00000513806 NEFLP07196 543 aa14.05□□□□□ -0.16
HTT-213ENST00000513806 AOC3Q16853 763 aa14.05□□□□□ -0.16
HTT-213ENST00000513806 RTKN2Q8IZC4 609 aa14.05□□□□□ -0.16
HTT-213ENST00000513806 HMMRO75330 724 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 CIAO1O76071 339 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 IL15P40933 162 aaPredicted RBP14.04□□□□□ -0.16
HTT-213ENST00000513806 KCNJ4P48050 445 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 DOK7Q18PE1 504 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 SOGA3Q5TF21 947 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 ANKRD2Q9GZV1 360 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 IL1RAPL2Q9NP60 686 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 PODXL2Q9NZ53 605 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 NOP58Q9Y2X3 529 aaKnown RBP14.04□□□□□ -0.16
HTT-213ENST00000513806 ZNF804BA4D1E1 1349 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 MROH5Q6ZUA9 1318 aa14.04□□□□□ -0.16
HTT-213ENST00000513806 PPIP5K2O43314 1243 aa14.03□□□□□ -0.16
HTT-213ENST00000513806 GRIN3BO60391 1043 aa14.03□□□□□ -0.16
HTT-213ENST00000513806 ATP2B4P23634 1241 aa14.03□□□□□ -0.16
HTT-213ENST00000513806 ADORA1P30542 326 aa14.03□□□□□ -0.16
HTT-213ENST00000513806 IARSP41252 1262 aaKnown RBP14.03□□□□□ -0.16
HTT-213ENST00000513806 PSMD1Q99460 953 aa14.03□□□□□ -0.16
HTT-213ENST00000513806 RTFDC1Q9BY42 306 aaPredicted RBP14.03□□□□□ -0.16
HTT-213ENST00000513806 CEP126Q9P2H0 1117 aa14.03□□□□□ -0.16
HTT-213ENST00000513806 ZNF646O15015 1829 aaPredicted RBP14.03□□□□□ -0.16
HTT-213ENST00000513806 ZNF609O15014 1411 aa14.02□□□□□ -0.16
HTT-213ENST00000513806 IRS2Q9Y4H2 1338 aa14.02□□□□□ -0.17
HTT-213ENST00000513806 PDE8BO95263 885 aa14.02□□□□□ -0.17
HTT-213ENST00000513806 TIMM10P62072 90 aa14.02□□□□□ -0.17
HTT-213ENST00000513806 C9orf131Q5VYM1 1079 aa14.02□□□□□ -0.17
HTT-213ENST00000513806 DBNDD1Q9H9R9 158 aa14.02□□□□□ -0.17
HTT-213ENST00000513806 RNF181Q9P0P0 153 aa14.02□□□□□ -0.17
HTT-213ENST00000513806 LTBP3Q9NS15 1303 aa14.01□□□□□ -0.17
HTT-213ENST00000513806 DCAF8L1A6NGE4 600 aa14.01□□□□□ -0.17
HTT-213ENST00000513806 FGFR2P21802 821 aa14.01□□□□□ -0.17
HTT-213ENST00000513806 GYG1P46976 350 aa14.01□□□□□ -0.17
HTT-213ENST00000513806 ATP2B3Q16720 1220 aa14.01□□□□□ -0.17
HTT-213ENST00000513806 WASHC4Q2M389 1173 aa14.01□□□□□ -0.17
HTT-213ENST00000513806 B4GALNT3Q6L9W6 998 aa14.01□□□□□ -0.17
HTT-213ENST00000513806 LARGE2Q8N3Y3 721 aa14.01□□□□□ -0.17
HTT-213ENST00000513806 RHPN1Q8TCX5 695 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms