RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ATP5J2-PTCD1G3V325 749 aa12.17□□□□□ -0.46
TPM3-221ENST00000513769 RPS6KA4O75676 772 aa12.17□□□□□ -0.46
TPM3-221ENST00000513769 PIP4K2AP48426 406 aaPredicted RBP12.17□□□□□ -0.46
TPM3-221ENST00000513769 MAP3K9P80192 1104 aa12.17□□□□□ -0.46
TPM3-221ENST00000513769 ITPK1Q13572 414 aa12.17□□□□□ -0.46
TPM3-221ENST00000513769 SLC27A3Q5K4L6 730 aa12.17□□□□□ -0.46
TPM3-221ENST00000513769 RHPN1Q8TCX5 695 aa12.17□□□□□ -0.46
TPM3-221ENST00000513769 SUCLG2Q96I99 432 aa12.17□□□□□ -0.46
TPM3-221ENST00000513769 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
TPM3-221ENST00000513769 ZNF652Q9Y2D9 606 aa12.17□□□□□ -0.46
TPM3-221ENST00000513769 ZBTB1Q9Y2K1 713 aa12.17□□□□□ -0.46
TPM3-221ENST00000513769 CICQ96RK0 1608 aaPredicted RBP12.17□□□□□ -0.46
TPM3-221ENST00000513769 CDHR2Q9BYE9 1310 aa12.16□□□□□ -0.46
TPM3-221ENST00000513769 TK2O00142 265 aa12.16□□□□□ -0.46
TPM3-221ENST00000513769 CSF1RP07333 972 aa12.16□□□□□ -0.46
TPM3-221ENST00000513769 FOSBP53539 338 aa12.16□□□□□ -0.46
TPM3-221ENST00000513769 C8orf34Q49A92 452 aa12.16□□□□□ -0.46
TPM3-221ENST00000513769 CLASRPQ8N2M8 674 aaKnown RBP12.16□□□□□ -0.46
TPM3-221ENST00000513769 BICC1Q9H694 974 aaKnown RBP12.16□□□□□ -0.46
TPM3-221ENST00000513769 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
TPM3-221ENST00000513769 AOX1Q06278 1338 aa12.15□□□□□ -0.46
TPM3-221ENST00000513769 DOT1LQ8TEK3 1739 aa12.15□□□□□ -0.46
TPM3-221ENST00000513769 PLSCR1O15162 318 aa12.15□□□□□ -0.46
TPM3-221ENST00000513769 YY1P25490 414 aa12.15□□□□□ -0.46
TPM3-221ENST00000513769 FOXO4P98177 505 aa12.15□□□□□ -0.46
TPM3-221ENST00000513769 UBE3BQ7Z3V4 1068 aa12.15□□□□□ -0.46
TPM3-221ENST00000513769 NLRP10Q86W26 655 aa12.15□□□□□ -0.46
TPM3-221ENST00000513769 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
TPM3-221ENST00000513769 ARXQ96QS3 562 aa12.15□□□□□ -0.46
TPM3-221ENST00000513769 PPP1R1BQ9UD71 204 aaPredicted RBP12.15□□□□□ -0.46
TPM3-221ENST00000513769 PDE1AP54750 535 aa12.14□□□□□ -0.47
TPM3-221ENST00000513769 TBC1D2BQ9UPU7 963 aa12.14□□□□□ -0.47
TPM3-221ENST00000513769 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
TPM3-221ENST00000513769 TTC41PQ6P2S7 1318 aa12.13□□□□□ -0.47
TPM3-221ENST00000513769 HLFQ16534 295 aa12.13□□□□□ -0.47
TPM3-221ENST00000513769 LMBR1LQ6UX01 489 aa12.13□□□□□ -0.47
TPM3-221ENST00000513769 UPF2Q9HAU5 1272 aaKnown RBP12.13□□□□□ -0.47
TPM3-221ENST00000513769 GPR108Q9NPR9 543 aa12.13□□□□□ -0.47
TPM3-221ENST00000513769 NARFQ9UHQ1 456 aa12.13□□□□□ -0.47
TPM3-221ENST00000513769 CCNL1Q9UK58 526 aaPredicted RBP12.13□□□□□ -0.47
TPM3-221ENST00000513769 RTCBQ9Y3I0 505 aaKnown RBP12.13□□□□□ -0.47
TPM3-221ENST00000513769 ZNF330Q9Y3S2 320 aaPredicted RBP12.13□□□□□ -0.47
TPM3-221ENST00000513769 TNS1Q9HBL0 1735 aaKnown RBP12.12□□□□□ -0.47
TPM3-221ENST00000513769 PDE8AO60658 829 aa12.12□□□□□ -0.47
TPM3-221ENST00000513769 CIAO1O76071 339 aa12.12□□□□□ -0.47
TPM3-221ENST00000513769 CAMTA2O94983 1202 aa12.12□□□□□ -0.47
TPM3-221ENST00000513769 RFX5P48382 616 aaPredicted RBP12.12□□□□□ -0.47
TPM3-221ENST00000513769 PTPN12Q05209 780 aaKnown RBP12.12□□□□□ -0.47
TPM3-221ENST00000513769 OS9Q13438 667 aaPredicted RBP12.12□□□□□ -0.47
TPM3-221ENST00000513769 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
TPM3-221ENST00000513769 TTC22Q5TAA0 569 aa12.12□□□□□ -0.47
TPM3-221ENST00000513769 SKAP1Q86WV1 359 aa12.12□□□□□ -0.47
TPM3-221ENST00000513769 C16orf71Q8IYS4 520 aaPredicted RBP12.12□□□□□ -0.47
TPM3-221ENST00000513769 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
TPM3-221ENST00000513769 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
TPM3-221ENST00000513769 SPON1Q9HCB6 807 aa12.12□□□□□ -0.47
TPM3-221ENST00000513769 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
TPM3-221ENST00000513769 SALL3Q9BXA9 1300 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 ARFGEF2Q9Y6D5 1785 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 ERC2O15083 957 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 HRO43593 1189 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 MX1P20591 662 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 IL15P40933 162 aaPredicted RBP12.11□□□□□ -0.47
TPM3-221ENST00000513769 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 EPHA10Q5JZY3 1008 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 SLC10A5Q5PT55 438 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 CASC1Q6TDU7 716 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
TPM3-221ENST00000513769 UTP14AQ9BVJ6 771 aaKnown RBP12.11□□□□□ -0.47
TPM3-221ENST00000513769 TRMT112Q9UI30 125 aaKnown RBP12.11□□□□□ -0.47
TPM3-221ENST00000513769 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
TPM3-221ENST00000513769 NHSQ6T4R5 1651 aa12.1□□□□□ -0.47
TPM3-221ENST00000513769 EPB41L2O43491 1005 aaKnown RBP12.1□□□□□ -0.47
TPM3-221ENST00000513769 ZPR1O75312 459 aa12.1□□□□□ -0.47
TPM3-221ENST00000513769 SASH1O94885 1247 aa12.1□□□□□ -0.47
TPM3-221ENST00000513769 FAM89AQ96GI7 184 aa12.1□□□□□ -0.47
TPM3-221ENST00000513769 TJP1Q07157 1748 aa12.1□□□□□ -0.47
TPM3-221ENST00000513769 SH3TC1Q8TE82 1336 aa12.1□□□□□ -0.47
TPM3-221ENST00000513769 RREB1Q92766 1687 aa12.1□□□□□ -0.47
TPM3-221ENST00000513769 IRS4O14654 1257 aaPredicted RBP12.09□□□□□ -0.47
TPM3-221ENST00000513769 SMARCA5O60264 1052 aaPredicted RBP12.09□□□□□ -0.47
TPM3-221ENST00000513769 GLRX3O76003 335 aaKnown RBP12.09□□□□□ -0.47
TPM3-221ENST00000513769 IFIT2P09913 472 aaKnown RBP12.09□□□□□ -0.47
TPM3-221ENST00000513769 IFIT5Q13325 482 aaKnown RBP12.09□□□□□ -0.47
TPM3-221ENST00000513769 TTLL11Q8NHH1 800 aa12.09□□□□□ -0.47
TPM3-221ENST00000513769 NYXQ9GZU5 481 aa12.09□□□□□ -0.47
TPM3-221ENST00000513769 AKAP2Q9Y2D5 859 aa12.09□□□□□ -0.47
TPM3-221ENST00000513769 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.47
TPM3-221ENST00000513769 EYA2O00167 538 aa12.08□□□□□ -0.48
TPM3-221ENST00000513769 APBB1O00213 710 aa12.08□□□□□ -0.48
TPM3-221ENST00000513769 CDC45O75419 566 aa12.08□□□□□ -0.48
TPM3-221ENST00000513769 PTPREP23469 700 aa12.08□□□□□ -0.48
TPM3-221ENST00000513769 ANP32AP39687 249 aaKnown RBP12.08□□□□□ -0.48
TPM3-221ENST00000513769 CAMK2BQ13554 666 aa12.08□□□□□ -0.48
TPM3-221ENST00000513769 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
TPM3-221ENST00000513769 PTF1AQ7RTS3 328 aa12.08□□□□□ -0.48
TPM3-221ENST00000513769 FLAD1Q8NFF5 587 aa12.08□□□□□ -0.48
TPM3-221ENST00000513769 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms