RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
POLR2J3-217ENST00000513438 CCDC184Q52MB2 194 aa17.27■□□□□ 0.36
POLR2J3-217ENST00000513438 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.36
POLR2J3-217ENST00000513438 SAPCD2Q86UD0 394 aa17.27■□□□□ 0.36
POLR2J3-217ENST00000513438 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
POLR2J3-217ENST00000513438 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.36
POLR2J3-217ENST00000513438 ZC3H12CQ9C0D7 883 aaKnown RBP17.27■□□□□ 0.36
POLR2J3-217ENST00000513438 ZNF408Q9H9D4 720 aa17.27■□□□□ 0.36
POLR2J3-217ENST00000513438 CWC25Q9NXE8 425 aaPredicted RBP17.27■□□□□ 0.36
POLR2J3-217ENST00000513438 CCDC85CA6NKD9 419 aa17.26■□□□□ 0.35
POLR2J3-217ENST00000513438 AOC2O75106 756 aa17.26■□□□□ 0.35
POLR2J3-217ENST00000513438 CCDC152Q4G0S7 254 aa17.26■□□□□ 0.35
POLR2J3-217ENST00000513438 USP48Q86UV5 1035 aa17.26■□□□□ 0.35
POLR2J3-217ENST00000513438 CCDC85AQ96PX6 553 aaPredicted RBP17.26■□□□□ 0.35
POLR2J3-217ENST00000513438 PODXL2Q9NZ53 605 aa17.26■□□□□ 0.35
POLR2J3-217ENST00000513438 TBC1D10BQ4KMP7 808 aaPredicted RBP17.25■□□□□ 0.35
POLR2J3-217ENST00000513438 RBM26Q5T8P6 1007 aaKnown RBP17.25■□□□□ 0.35
POLR2J3-217ENST00000513438 DLK2Q6UY11 383 aa17.25■□□□□ 0.35
POLR2J3-217ENST00000513438 ANKIB1Q9P2G1 1089 aa17.25■□□□□ 0.35
POLR2J3-217ENST00000513438 TSKSQ9UJT2 592 aa17.25■□□□□ 0.35
POLR2J3-217ENST00000513438 MAP3K2Q9Y2U5 619 aa17.25■□□□□ 0.35
POLR2J3-217ENST00000513438 G3V3G9 751 aa17.24■□□□□ 0.35
POLR2J3-217ENST00000513438 RPS12P25398 132 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-217ENST00000513438 MAP2K2P36507 400 aa17.24■□□□□ 0.35
POLR2J3-217ENST00000513438 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
POLR2J3-217ENST00000513438 DCAF8Q5TAQ9 597 aa17.24■□□□□ 0.35
POLR2J3-217ENST00000513438 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
POLR2J3-217ENST00000513438 TSR2Q969E8 191 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-217ENST00000513438 RTL9Q8NET4 1388 aa17.24■□□□□ 0.35
POLR2J3-217ENST00000513438 PI4KAP2A4QPH2 592 aa17.23■□□□□ 0.35
POLR2J3-217ENST00000513438 UFL1O94874 794 aa17.23■□□□□ 0.35
POLR2J3-217ENST00000513438 EGFRP00533 1210 aa17.23■□□□□ 0.35
POLR2J3-217ENST00000513438 VIL1P09327 827 aaKnown RBP17.23■□□□□ 0.35
POLR2J3-217ENST00000513438 PI4KAP1Q8N8J0 262 aa17.23■□□□□ 0.35
POLR2J3-217ENST00000513438 HHIPL1Q96JK4 782 aa17.23■□□□□ 0.35
POLR2J3-217ENST00000513438 GGA1Q9UJY5 639 aa17.23■□□□□ 0.35
POLR2J3-217ENST00000513438 IGKV5-2P06315 115 aa17.22■□□□□ 0.35
POLR2J3-217ENST00000513438 ANKRD18AQ8IVF6 992 aa17.22■□□□□ 0.35
POLR2J3-217ENST00000513438 POLR2AP24928 1970 aaKnown RBP17.22■□□□□ 0.35
POLR2J3-217ENST00000513438 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
POLR2J3-217ENST00000513438 CCDC27Q2M243 656 aa17.21■□□□□ 0.35
POLR2J3-217ENST00000513438 KRT26Q7Z3Y9 468 aa17.21■□□□□ 0.35
POLR2J3-217ENST00000513438 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
POLR2J3-217ENST00000513438 DCPSQ96C86 337 aaKnown RBP17.21■□□□□ 0.35
POLR2J3-217ENST00000513438 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
POLR2J3-217ENST00000513438 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
POLR2J3-217ENST00000513438 G2E3Q7L622 706 aa17.2■□□□□ 0.34
POLR2J3-217ENST00000513438 TTLL11Q8NHH1 800 aa17.2■□□□□ 0.34
POLR2J3-217ENST00000513438 SCN9AQ15858 1988 aa17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 CA12O43570 354 aa17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 ATP2B4P23634 1241 aa17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 CTSWP56202 376 aa17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 HUNKP57058 714 aa17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 MLLT1Q03111 559 aaPredicted RBP17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 KIF4BQ2VIQ3 1234 aa17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 TWISTNBQ3B726 338 aaPredicted RBP17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 XDHP47989 1333 aa17.19■□□□□ 0.34
POLR2J3-217ENST00000513438 WTIPA6NIX2 430 aaPredicted RBP17.18■□□□□ 0.34
POLR2J3-217ENST00000513438 ADM5C9JUS6 153 aa17.18■□□□□ 0.34
POLR2J3-217ENST00000513438 RSBN1LQ6PCB5 846 aaPredicted RBP17.18■□□□□ 0.34
POLR2J3-217ENST00000513438 CDC5LQ99459 802 aaKnown RBP17.18■□□□□ 0.34
POLR2J3-217ENST00000513438 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
POLR2J3-217ENST00000513438 C2orf69Q8N8R5 385 aa17.17■□□□□ 0.34
POLR2J3-217ENST00000513438 AGBL3Q8NEM8 1001 aa17.17■□□□□ 0.34
POLR2J3-217ENST00000513438 ZIC5Q96T25 663 aa17.17■□□□□ 0.34
POLR2J3-217ENST00000513438 GREM2Q9H772 168 aa17.17■□□□□ 0.34
POLR2J3-217ENST00000513438 GBA2Q9HCG7 927 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-217ENST00000513438 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-217ENST00000513438 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
POLR2J3-217ENST00000513438 ASTN2O75129 1339 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-217ENST00000513438 H7C1W4 665 aa17.16■□□□□ 0.34
POLR2J3-217ENST00000513438 BRPF1P55201 1214 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-217ENST00000513438 NOGQ13253 232 aa17.16■□□□□ 0.34
POLR2J3-217ENST00000513438 PODNQ7Z5L7 613 aa17.16■□□□□ 0.34
POLR2J3-217ENST00000513438 IL16Q14005 1332 aa17.16■□□□□ 0.34
POLR2J3-217ENST00000513438 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
POLR2J3-217ENST00000513438 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
POLR2J3-217ENST00000513438 ZNF280AP59817 542 aaPredicted RBP17.15■□□□□ 0.34
POLR2J3-217ENST00000513438 SCARF1Q14162 830 aa17.15■□□□□ 0.34
POLR2J3-217ENST00000513438 RGMBQ6NW40 437 aa17.15■□□□□ 0.34
POLR2J3-217ENST00000513438 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
POLR2J3-217ENST00000513438 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
POLR2J3-217ENST00000513438 SULF1Q8IWU6 871 aa17.15■□□□□ 0.34
POLR2J3-217ENST00000513438 GMLQ99445 158 aa17.15■□□□□ 0.34
POLR2J3-217ENST00000513438 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
POLR2J3-217ENST00000513438 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
POLR2J3-217ENST00000513438 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
POLR2J3-217ENST00000513438 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
POLR2J3-217ENST00000513438 USP17L8P0C7I0 530 aa17.13■□□□□ 0.33
POLR2J3-217ENST00000513438 CCT4P50991 539 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-217ENST00000513438 FLIIQ13045 1269 aa17.13■□□□□ 0.33
POLR2J3-217ENST00000513438 DGKZQ13574 1117 aa17.13■□□□□ 0.33
POLR2J3-217ENST00000513438 GCKRQ14397 625 aa17.13■□□□□ 0.33
POLR2J3-217ENST00000513438 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-217ENST00000513438 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
POLR2J3-217ENST00000513438 MYOZ2Q9NPC6 264 aa17.13■□□□□ 0.33
POLR2J3-217ENST00000513438 CASP8AP2Q9UKL3 1982 aa17.12■□□□□ 0.33
POLR2J3-217ENST00000513438 FAM155AB1AL88 458 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms