RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 GIGYF2Q6Y7W6 1299 aaKnown RBP16.57■□□□□ 0.24
SDHA-215ENST00000512962 ZIC5Q96T25 663 aa16.57■□□□□ 0.24
SDHA-215ENST00000512962 PDE4DIPQ5VU43 2346 aa16.57■□□□□ 0.24
SDHA-215ENST00000512962 ECE1P42892 770 aa16.56■□□□□ 0.24
SDHA-215ENST00000512962 ARSIQ5FYB1 569 aa16.56■□□□□ 0.24
SDHA-215ENST00000512962 ZNF454Q8N9F8 522 aa16.56■□□□□ 0.24
SDHA-215ENST00000512962 PSMD1Q99460 953 aa16.56■□□□□ 0.24
SDHA-215ENST00000512962 REPIN1Q9BWE0 567 aaKnown RBP16.56■□□□□ 0.24
SDHA-215ENST00000512962 NIP7Q9Y221 180 aaKnown RBP eCLIP16.56■□□□□ 0.24
SDHA-215ENST00000512962 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
SDHA-215ENST00000512962 DIAPH1O60610 1272 aaKnown RBP16.55■□□□□ 0.24
SDHA-215ENST00000512962 BEGAINQ9BUH8 593 aa16.55■□□□□ 0.24
SDHA-215ENST00000512962 CLEC4GQ6UXB4 293 aa16.54■□□□□ 0.24
SDHA-215ENST00000512962 SAPCD2Q86UD0 394 aa16.54■□□□□ 0.24
SDHA-215ENST00000512962 NUTM1Q86Y26 1132 aa16.54■□□□□ 0.24
SDHA-215ENST00000512962 ZDHHC16Q969W1 377 aa16.54■□□□□ 0.24
SDHA-215ENST00000512962 KNSTRNQ9Y448 316 aa16.54■□□□□ 0.24
SDHA-215ENST00000512962 MS4A1P11836 297 aa16.53■□□□□ 0.24
SDHA-215ENST00000512962 MAP2K2P36507 400 aa16.53■□□□□ 0.24
SDHA-215ENST00000512962 DGKZQ13574 1117 aa16.53■□□□□ 0.24
SDHA-215ENST00000512962 CRY2Q49AN0 593 aa16.53■□□□□ 0.24
SDHA-215ENST00000512962 C6orf132Q5T0Z8 1188 aa16.53■□□□□ 0.24
SDHA-215ENST00000512962 DLK2Q6UY11 383 aa16.53■□□□□ 0.24
SDHA-215ENST00000512962 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
SDHA-215ENST00000512962 PHOX2BQ99453 314 aa16.53■□□□□ 0.24
SDHA-215ENST00000512962 GLIS2Q9BZE0 524 aaPredicted RBP16.53■□□□□ 0.24
SDHA-215ENST00000512962 LAMB2P55268 1798 aa16.53■□□□□ 0.24
SDHA-215ENST00000512962 RIC1Q4ADV7 1423 aa16.53■□□□□ 0.24
SDHA-215ENST00000512962 BTBD11A6QL63 1104 aa16.52■□□□□ 0.24
SDHA-215ENST00000512962 LMOD1P29536 600 aaPredicted RBP16.52■□□□□ 0.24
SDHA-215ENST00000512962 EIF6P56537 245 aaKnown RBP16.52■□□□□ 0.24
SDHA-215ENST00000512962 CIAPIN1Q6FI81 312 aa16.52■□□□□ 0.24
SDHA-215ENST00000512962 TPTE2Q6XPS3 522 aa16.52■□□□□ 0.24
SDHA-215ENST00000512962 JDP2Q8WYK2 163 aa16.52■□□□□ 0.24
SDHA-215ENST00000512962 CELF2O95319 508 aaKnown RBP16.51■□□□□ 0.23
SDHA-215ENST00000512962 SOX10P56693 466 aa16.51■□□□□ 0.23
SDHA-215ENST00000512962 USP50Q70EL3 339 aaPredicted RBP16.51■□□□□ 0.23
SDHA-215ENST00000512962 TCERG1O14776 1098 aaKnown RBP16.5■□□□□ 0.23
SDHA-215ENST00000512962 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
SDHA-215ENST00000512962 EIF4G2P78344 907 aaKnown RBP eCLIP16.5■□□□□ 0.23
SDHA-215ENST00000512962 GPR153Q6NV75 609 aa16.5■□□□□ 0.23
SDHA-215ENST00000512962 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
SDHA-215ENST00000512962 LARGE2Q8N3Y3 721 aa16.5■□□□□ 0.23
SDHA-215ENST00000512962 TMUB1Q9BVT8 246 aa16.5■□□□□ 0.23
SDHA-215ENST00000512962 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
SDHA-215ENST00000512962 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
SDHA-215ENST00000512962 ZNF652Q9Y2D9 606 aa16.5■□□□□ 0.23
SDHA-215ENST00000512962 UBN2Q6ZU65 1347 aa16.49■□□□□ 0.23
SDHA-215ENST00000512962 KDM3BQ7LBC6 1761 aa16.49■□□□□ 0.23
SDHA-215ENST00000512962 SHTN1A0MZ66 631 aa16.49■□□□□ 0.23
SDHA-215ENST00000512962 RIMBP2O15034 1052 aa16.49■□□□□ 0.23
SDHA-215ENST00000512962 U2SURPO15042 1029 aaKnown RBP16.49■□□□□ 0.23
SDHA-215ENST00000512962 TAF1P21675 1872 aa16.49■□□□□ 0.23
SDHA-215ENST00000512962 HIRAP54198 1017 aaPredicted RBP16.49■□□□□ 0.23
SDHA-215ENST00000512962 TRIM26Q12899 539 aaPredicted RBP16.49■□□□□ 0.23
SDHA-215ENST00000512962 PADI6Q6TGC4 694 aa16.49■□□□□ 0.23
SDHA-215ENST00000512962 GAS2L2Q8NHY3 880 aa16.49■□□□□ 0.23
SDHA-215ENST00000512962 ADAM33Q9BZ11 813 aa16.49■□□□□ 0.23
SDHA-215ENST00000512962 CLCN1P35523 988 aa16.48■□□□□ 0.23
SDHA-215ENST00000512962 MDM2Q00987 491 aaPredicted RBP16.48■□□□□ 0.23
SDHA-215ENST00000512962 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
SDHA-215ENST00000512962 ZNF408Q9H9D4 720 aa16.48■□□□□ 0.23
SDHA-215ENST00000512962 NPC1L1Q9UHC9 1359 aa16.48■□□□□ 0.23
SDHA-215ENST00000512962 HOXA10P31260 410 aaPredicted RBP16.47■□□□□ 0.23
SDHA-215ENST00000512962 CXCL9Q07325 125 aa16.47■□□□□ 0.23
SDHA-215ENST00000512962 AOC3Q16853 763 aa16.47■□□□□ 0.23
SDHA-215ENST00000512962 TRPM4Q8TD43 1214 aa16.47■□□□□ 0.23
SDHA-215ENST00000512962 ADARB2Q9NS39 739 aaKnown RBP16.47■□□□□ 0.23
SDHA-215ENST00000512962 DUOX1Q9NRD9 1551 aa16.47■□□□□ 0.23
SDHA-215ENST00000512962 POLR2AP24928 1970 aaKnown RBP16.46■□□□□ 0.23
SDHA-215ENST00000512962 PER1O15534 1290 aaPredicted RBP16.46■□□□□ 0.23
SDHA-215ENST00000512962 SNRPA1P09661 255 aaKnown RBP16.46■□□□□ 0.23
SDHA-215ENST00000512962 GMPSP49915 693 aaPredicted RBP16.46■□□□□ 0.23
SDHA-215ENST00000512962 DCTN1Q14203 1278 aa16.46■□□□□ 0.23
SDHA-215ENST00000512962 MCM10Q7L590 875 aa16.46■□□□□ 0.23
SDHA-215ENST00000512962 GPCPD1Q9NPB8 672 aa16.46■□□□□ 0.23
SDHA-215ENST00000512962 SCUBE2Q9NQ36 999 aa16.46■□□□□ 0.23
SDHA-215ENST00000512962 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
SDHA-215ENST00000512962 PPIP5K2O43314 1243 aa16.45■□□□□ 0.22
SDHA-215ENST00000512962 CA12O43570 354 aa16.45■□□□□ 0.22
SDHA-215ENST00000512962 PRKAR2BP31323 418 aa16.45■□□□□ 0.22
SDHA-215ENST00000512962 NIM1KQ8IY84 436 aa16.45■□□□□ 0.22
SDHA-215ENST00000512962 HHIPL1Q96JK4 782 aa16.45■□□□□ 0.22
SDHA-215ENST00000512962 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
SDHA-215ENST00000512962 PGAP2Q9UHJ9 254 aa16.45■□□□□ 0.22
SDHA-215ENST00000512962 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
SDHA-215ENST00000512962 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
SDHA-215ENST00000512962 GPTP24298 496 aa16.44■□□□□ 0.22
SDHA-215ENST00000512962 GTF2E1P29083 439 aaPredicted RBP16.44■□□□□ 0.22
SDHA-215ENST00000512962 CC2D2BQ6DHV5 1058 aa16.44■□□□□ 0.22
SDHA-215ENST00000512962 TTLL7Q6ZT98 887 aa16.44■□□□□ 0.22
SDHA-215ENST00000512962 METTL3Q86U44 580 aaKnown RBP16.44■□□□□ 0.22
SDHA-215ENST00000512962 NGEFQ8N5V2 710 aa16.44■□□□□ 0.22
SDHA-215ENST00000512962 ADGRG1Q9Y653 693 aa16.44■□□□□ 0.22
SDHA-215ENST00000512962 COL4A1P02462 1669 aa16.43■□□□□ 0.22
SDHA-215ENST00000512962 AKAP11Q9UKA4 1901 aa16.43■□□□□ 0.22
SDHA-215ENST00000512962 FAM155AB1AL88 458 aaPredicted RBP16.43■□□□□ 0.22
SDHA-215ENST00000512962 CNGB1Q14028 1251 aaPredicted RBP16.43■□□□□ 0.22
SDHA-215ENST00000512962 SUSD4Q5VX71 490 aa16.43■□□□□ 0.22
SDHA-215ENST00000512962 ZNF710Q8N1W2 664 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms