RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TSNAXIP1Q2TAA8 658 aa6.78□□□□□ -1.32
HTT-210ENST00000512909 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.78□□□□□ -1.32
HTT-210ENST00000512909 ZNF468Q5VIY5 522 aaPredicted RBP6.78□□□□□ -1.32
HTT-210ENST00000512909 TREML4Q6UXN2 200 aa6.78□□□□□ -1.32
HTT-210ENST00000512909 GALNT12Q8IXK2 581 aa6.78□□□□□ -1.32
HTT-210ENST00000512909 NPHS2Q9NP85 383 aa6.78□□□□□ -1.32
HTT-210ENST00000512909 AVENQ9NQS1 362 aaPredicted RBP6.78□□□□□ -1.32
HTT-210ENST00000512909 SIN3BO75182 1162 aa6.77□□□□□ -1.33
HTT-210ENST00000512909 SMNDC1O75940 238 aaKnown RBP eCLIP6.77□□□□□ -1.33
HTT-210ENST00000512909 ARAFP10398 606 aa6.77□□□□□ -1.33
HTT-210ENST00000512909 USPL1Q5W0Q7 1092 aa6.77□□□□□ -1.33
HTT-210ENST00000512909 ELMSAN1Q6PJG2 1045 aa6.77□□□□□ -1.33
HTT-210ENST00000512909 GOLGA6L1Q8N7Z2 621 aa6.77□□□□□ -1.33
HTT-210ENST00000512909 COL25A1Q9BXS0 654 aaPredicted RBP6.77□□□□□ -1.33
HTT-210ENST00000512909 DNAJB12Q9NXW2 375 aaKnown RBP6.77□□□□□ -1.33
HTT-210ENST00000512909 GDF2Q9UK05 429 aaPredicted RBP6.77□□□□□ -1.33
HTT-210ENST00000512909 LOC102724428A0A0B4J2F2 783 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 NEURL1BA8MQ27 555 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 CYP2E1P05181 493 aaPredicted RBP6.76□□□□□ -1.33
HTT-210ENST00000512909 CPB1P15086 417 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 GRNP28799 593 aaKnown RBP6.76□□□□□ -1.33
HTT-210ENST00000512909 SIK1P57059 783 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 GPLD1P80108 840 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 GRIN2CQ14957 1233 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 HFE2Q6ZVN8 426 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 FAM35AQ86V20 835 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 TMEM87AQ8NBN3 555 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 EPS8L3Q8TE67 593 aaKnown RBP6.76□□□□□ -1.33
HTT-210ENST00000512909 SRCIN1Q9C0H9 1055 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 ZFATQ9P243 1243 aa6.76□□□□□ -1.33
HTT-210ENST00000512909 IGF1RP08069 1367 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 IGHA2P01877 340 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 AMPD1P23109 780 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 DAB2P98082 770 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 TAGLNQ01995 201 aaKnown RBP6.75□□□□□ -1.33
HTT-210ENST00000512909 TMC4Q7Z404 712 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 ASAP3Q8TDY4 903 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 FAM161BQ96MY7 647 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 CNTNAP3BQ96NU0 1288 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 OSMRQ99650 979 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 OXCT2Q9BYC2 517 aaPredicted RBP6.75□□□□□ -1.33
HTT-210ENST00000512909 CNTNAP3Q9BZ76 1288 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 LIN7BQ9HAP6 207 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 ZFYVE1Q9HBF4 777 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 AK5Q9Y6K8 562 aa6.75□□□□□ -1.33
HTT-210ENST00000512909 NACADO15069 1562 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 J3QW42 95 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 GSTT1P30711 240 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 ADH7P40394 386 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 CABP4P57796 275 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 MAP3K10Q02779 954 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 CEP135Q66GS9 1140 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 DTHD1Q6ZMT9 781 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 SETDB2Q96T68 719 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 BCO2Q9BYV7 579 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 CHRDQ9H2X0 955 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 SUV39H2Q9H5I1 410 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 C12orf49Q9H741 205 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 FAM8A1Q9UBU6 413 aa6.74□□□□□ -1.33
HTT-210ENST00000512909 RGS9O75916 674 aaPredicted RBP6.73□□□□□ -1.33
HTT-210ENST00000512909 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
HTT-210ENST00000512909 DIEXFQ68CQ4 756 aaKnown RBP6.73□□□□□ -1.33
HTT-210ENST00000512909 TRPM4Q8TD43 1214 aa6.73□□□□□ -1.33
HTT-210ENST00000512909 SALL4Q9UJQ4 1053 aa6.73□□□□□ -1.33
HTT-210ENST00000512909 GGA1Q9UJY5 639 aa6.73□□□□□ -1.33
HTT-210ENST00000512909 SLC6A14Q9UN76 642 aa6.73□□□□□ -1.33
HTT-210ENST00000512909 TTF2Q9UNY4 1162 aaKnown RBP6.73□□□□□ -1.33
HTT-210ENST00000512909 AKAP2Q9Y2D5 859 aa6.73□□□□□ -1.33
HTT-210ENST00000512909 ELOA3CA0A087WX78 387 aaPredicted RBP6.72□□□□□ -1.33
HTT-210ENST00000512909 A0A1W2PP55 124 aa6.72□□□□□ -1.33
HTT-210ENST00000512909 ELOA3DA6NLF2 546 aaPredicted RBP6.72□□□□□ -1.33
HTT-210ENST00000512909 XRCC5P13010 732 aaKnown RBP6.72□□□□□ -1.33
HTT-210ENST00000512909 LMNB1P20700 586 aa6.72□□□□□ -1.33
HTT-210ENST00000512909 IRS1P35568 1242 aa6.72□□□□□ -1.33
HTT-210ENST00000512909 FCGRTP55899 365 aa6.72□□□□□ -1.33
HTT-210ENST00000512909 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
HTT-210ENST00000512909 ELOA3BQ3SY89 546 aa6.72□□□□□ -1.33
HTT-210ENST00000512909 KIAA0319Q5VV43 1072 aa6.72□□□□□ -1.33
HTT-210ENST00000512909 NXPE4Q6UWF7 544 aa6.72□□□□□ -1.33
HTT-210ENST00000512909 ELOA3Q8NG57 546 aa6.72□□□□□ -1.33
HTT-210ENST00000512909 DDX54Q8TDD1 881 aaKnown RBP6.72□□□□□ -1.33
HTT-210ENST00000512909 UNCXA6NJT0 531 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 PDE2AO00408 941 aaPredicted RBP6.71□□□□□ -1.34
HTT-210ENST00000512909 C2CD2LO14523 706 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 USP17L7P0C7H9 530 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 PTPRAP18433 802 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 VAMP1P23763 118 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 GAS6Q14393 721 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 FAM117BQ6P1L5 589 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 PI16Q6UXB8 463 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 GPR161Q8N6U8 529 aaKnown RBP6.71□□□□□ -1.34
HTT-210ENST00000512909 TNFRSF25Q93038 417 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 PLD4Q96BZ4 506 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 PBX4Q9BYU1 374 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 SMG9Q9H0W8 520 aaKnown RBP6.71□□□□□ -1.34
HTT-210ENST00000512909 ENAMQ9NRM1 1142 aa6.71□□□□□ -1.34
HTT-210ENST00000512909 SCAMP3O14828 347 aaKnown RBP6.7□□□□□ -1.34
HTT-210ENST00000512909 WFS1O76024 890 aa6.7□□□□□ -1.34
HTT-210ENST00000512909 KIF4AO95239 1232 aa6.7□□□□□ -1.34
HTT-210ENST00000512909 ADAMTS2O95450 1211 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms