RNA–Protein interactions for RNA: ENST00000512345.5

LDB2-214, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 923 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-214ENST00000512345 SMC1BQ8NDV3 1235 aa12.92□□□□□ -0.34
LDB2-214ENST00000512345 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
LDB2-214ENST00000512345 HDAC5Q9UQL6 1122 aa12.92□□□□□ -0.34
LDB2-214ENST00000512345 TIAM2Q8IVF5 1701 aa12.91□□□□□ -0.34
LDB2-214ENST00000512345 SLX4Q8IY92 1834 aa12.91□□□□□ -0.34
LDB2-214ENST00000512345 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
LDB2-214ENST00000512345 IGHDP01880 384 aa12.91□□□□□ -0.34
LDB2-214ENST00000512345 GTF2E1P29083 439 aaPredicted RBP12.91□□□□□ -0.34
LDB2-214ENST00000512345 RPAP2Q8IXW5 612 aaPredicted RBP12.91□□□□□ -0.34
LDB2-214ENST00000512345 ZNF34Q8IZ26 560 aa12.91□□□□□ -0.34
LDB2-214ENST00000512345 C7orf43Q8WVR3 580 aa12.91□□□□□ -0.34
LDB2-214ENST00000512345 ANKRD36CQ5JPF3 1778 aa12.91□□□□□ -0.34
LDB2-214ENST00000512345 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
LDB2-214ENST00000512345 H7C1W4 665 aa12.9□□□□□ -0.34
LDB2-214ENST00000512345 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
LDB2-214ENST00000512345 GPTP24298 496 aa12.9□□□□□ -0.34
LDB2-214ENST00000512345 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
LDB2-214ENST00000512345 CCDC93Q567U6 631 aa12.9□□□□□ -0.34
LDB2-214ENST00000512345 CEP85Q6P2H3 762 aa12.9□□□□□ -0.34
LDB2-214ENST00000512345 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
LDB2-214ENST00000512345 ANKRD44Q8N8A2 993 aa12.9□□□□□ -0.34
LDB2-214ENST00000512345 NYXQ9GZU5 481 aa12.9□□□□□ -0.34
LDB2-214ENST00000512345 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
LDB2-214ENST00000512345 CCDC88AQ3V6T2 1871 aa12.9□□□□□ -0.34
LDB2-214ENST00000512345 POTECB2RU33 542 aa12.89□□□□□ -0.35
LDB2-214ENST00000512345 CASP7P55210 303 aa12.89□□□□□ -0.35
LDB2-214ENST00000512345 HTRA3P83110 453 aa12.89□□□□□ -0.35
LDB2-214ENST00000512345 ATP8B2P98198 1209 aa12.89□□□□□ -0.35
LDB2-214ENST00000512345 CENPQQ7L2Z9 268 aaPredicted RBP12.89□□□□□ -0.35
LDB2-214ENST00000512345 SIRT2Q8IXJ6 389 aa12.89□□□□□ -0.35
LDB2-214ENST00000512345 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
LDB2-214ENST00000512345 FAM212AQ96EL1 285 aa12.89□□□□□ -0.35
LDB2-214ENST00000512345 SUCLG2Q96I99 432 aa12.89□□□□□ -0.35
LDB2-214ENST00000512345 WDR90Q96KV7 1748 aa12.88□□□□□ -0.35
LDB2-214ENST00000512345 STK25O00506 426 aa12.88□□□□□ -0.35
LDB2-214ENST00000512345 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
LDB2-214ENST00000512345 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
LDB2-214ENST00000512345 FKBP4Q02790 459 aaKnown RBP eCLIP12.88□□□□□ -0.35
LDB2-214ENST00000512345 NBR1Q14596 966 aa12.88□□□□□ -0.35
LDB2-214ENST00000512345 PARP10Q53GL7 1025 aa12.88□□□□□ -0.35
LDB2-214ENST00000512345 UBE3BQ7Z3V4 1068 aa12.88□□□□□ -0.35
LDB2-214ENST00000512345 NUTM1Q86Y26 1132 aa12.88□□□□□ -0.35
LDB2-214ENST00000512345 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
LDB2-214ENST00000512345 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
LDB2-214ENST00000512345 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
LDB2-214ENST00000512345 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
LDB2-214ENST00000512345 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
LDB2-214ENST00000512345 SUSD4Q5VX71 490 aa12.87□□□□□ -0.35
LDB2-214ENST00000512345 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
LDB2-214ENST00000512345 KLRG1Q96E93 195 aa12.87□□□□□ -0.35
LDB2-214ENST00000512345 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
LDB2-214ENST00000512345 DICER1Q9UPY3 1922 aaKnown RBP12.87□□□□□ -0.35
LDB2-214ENST00000512345 HMMRO75330 724 aa12.86□□□□□ -0.35
LDB2-214ENST00000512345 DDNO94850 711 aaPredicted RBP12.86□□□□□ -0.35
LDB2-214ENST00000512345 CRY2Q49AN0 593 aa12.86□□□□□ -0.35
LDB2-214ENST00000512345 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
LDB2-214ENST00000512345 OLFM4Q6UX06 510 aa12.86□□□□□ -0.35
LDB2-214ENST00000512345 PPP1R42Q7Z4L9 355 aa12.86□□□□□ -0.35
LDB2-214ENST00000512345 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
LDB2-214ENST00000512345 UTP14AQ9BVJ6 771 aaKnown RBP12.86□□□□□ -0.35
LDB2-214ENST00000512345 BICC1Q9H694 974 aaKnown RBP12.86□□□□□ -0.35
LDB2-214ENST00000512345 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
LDB2-214ENST00000512345 TRMT112Q9UI30 125 aaKnown RBP12.86□□□□□ -0.35
LDB2-214ENST00000512345 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
LDB2-214ENST00000512345 PNMA6EA0A0J9YXQ4 647 aa12.85□□□□□ -0.35
LDB2-214ENST00000512345 NTSR2O95665 410 aa12.85□□□□□ -0.35
LDB2-214ENST00000512345 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
LDB2-214ENST00000512345 MTX1Q13505 466 aa12.85□□□□□ -0.35
LDB2-214ENST00000512345 EPHA10Q5JZY3 1008 aa12.85□□□□□ -0.35
LDB2-214ENST00000512345 CDHR2Q9BYE9 1310 aa12.85□□□□□ -0.35
LDB2-214ENST00000512345 SRGAP3O43295 1099 aa12.84□□□□□ -0.35
LDB2-214ENST00000512345 HOXA10P31260 410 aaPredicted RBP12.84□□□□□ -0.35
LDB2-214ENST00000512345 FOXO4P98177 505 aa12.84□□□□□ -0.35
LDB2-214ENST00000512345 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
LDB2-214ENST00000512345 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
LDB2-214ENST00000512345 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
LDB2-214ENST00000512345 RPGRQ92834 1020 aaKnown RBP12.84□□□□□ -0.35
LDB2-214ENST00000512345 GCC1Q96CN9 775 aa12.84□□□□□ -0.35
LDB2-214ENST00000512345 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
LDB2-214ENST00000512345 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
LDB2-214ENST00000512345 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
LDB2-214ENST00000512345 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
LDB2-214ENST00000512345 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
LDB2-214ENST00000512345 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
LDB2-214ENST00000512345 SMC5Q8IY18 1101 aa12.83□□□□□ -0.36
LDB2-214ENST00000512345 JMYQ8N9B5 988 aa12.83□□□□□ -0.36
LDB2-214ENST00000512345 L3MBTL3Q96JM7 780 aaPredicted RBP12.83□□□□□ -0.36
LDB2-214ENST00000512345 SNED1Q8TER0 1413 aa12.82□□□□□ -0.36
LDB2-214ENST00000512345 IQCA1LA6NCM1 817 aa12.82□□□□□ -0.36
LDB2-214ENST00000512345 IRS4O14654 1257 aaPredicted RBP12.82□□□□□ -0.36
LDB2-214ENST00000512345 LMBR1LQ6UX01 489 aa12.82□□□□□ -0.36
LDB2-214ENST00000512345 RBM17Q96I25 401 aaKnown RBP12.82□□□□□ -0.36
LDB2-214ENST00000512345 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
LDB2-214ENST00000512345 PSMD1Q99460 953 aa12.82□□□□□ -0.36
LDB2-214ENST00000512345 ZNF541Q9H0D2 1346 aa12.82□□□□□ -0.36
LDB2-214ENST00000512345 PDE8AO60658 829 aa12.81□□□□□ -0.36
LDB2-214ENST00000512345 CSF1RP07333 972 aa12.81□□□□□ -0.36
LDB2-214ENST00000512345 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
LDB2-214ENST00000512345 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
LDB2-214ENST00000512345 HSP90B1P14625 803 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms